Ccur035370.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- -
- Assembly
- GCA_905475355.1
- Location
- FR997797.1:6518576-6527310[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.026 2.6 9.6 1.4 3 23 701 722 700 722 0.92 2 23 0.34 34 6.1 0.2 1 21 1119 1139 1119 1140 0.96 3 23 0.84 85 4.9 0.2 1 23 1182 1205 1182 1205 0.90 4 23 0.0052 0.53 11.8 1.9 2 22 1215 1235 1214 1235 0.94 5 23 0.17 18 7.0 0.4 2 23 1243 1265 1242 1265 0.93 6 23 0.033 3.3 9.3 0.2 3 23 1285 1306 1283 1306 0.96 7 23 0.0051 0.52 11.8 3.6 1 23 1312 1335 1312 1335 0.95 8 23 0.14 14 7.3 0.0 1 23 1359 1382 1359 1382 0.90 9 23 0.021 2.2 9.9 3.4 1 23 1387 1409 1387 1409 0.97 10 23 0.0019 0.2 13.2 0.0 1 23 1415 1438 1415 1438 0.96 11 23 0.00019 0.019 16.4 1.3 1 23 1450 1472 1450 1472 0.97 12 23 0.0002 0.021 16.3 1.8 1 23 1521 1544 1521 1544 0.97 13 23 0.0048 0.49 11.9 1.6 1 23 1613 1636 1613 1636 0.96 14 23 0.0013 0.13 13.8 2.1 2 23 1663 1685 1662 1685 0.95 15 23 0.099 10 7.8 0.1 2 23 1691 1713 1690 1713 0.93 16 23 0.014 1.5 10.4 0.2 1 21 1758 1778 1758 1779 0.95 17 23 0.00045 0.046 15.2 0.9 1 23 1789 1811 1789 1811 0.93 18 23 0.00013 0.013 16.9 0.3 2 23 1908 1930 1908 1930 0.93 19 23 4.5e-07 4.6e-05 24.6 1.4 3 23 1937 1957 1936 1957 0.98 20 23 1.2 1.2e+02 4.4 0.5 1 23 1977 2000 1977 2000 0.93 21 23 0.11 11 7.7 0.0 1 23 2023 2045 2023 2045 0.98 22 23 0.014 1.4 10.5 0.9 1 23 2051 2074 2051 2074 0.95 23 23 0.0003 0.031 15.7 0.4 1 23 2082 2105 2082 2105 0.96
Sequence Information
- Coding Sequence
- ATGAGTGGAAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTACGGATGACTCTGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGCGTGTCCGTTCAGATAAACGAGACTGACGACCTGCCTACTAATGTCTGCAGGAAATGTACTGACAATGTCAACAACTGGCATATTTTTAAAGCTGTCTGTGAAAGGACACAAATCAAACTACAAAGTTTGAGAGATAGCAGCCAACTAGAAGAGATTCAAGTTAAAAGTGAACCATTGTCTGATGAAGCTTATGATGATGGAGTGGTTATTGATGGGTCATACCCTGATGAGAATGCTGCCAGCAAAGTACAGCCAGAAGGCCCCCCAATCTTGGCATCGCTGGGGCTCACGCCGAGGAGTGATAAGAAAGTGGACCCCCGAATGGACTGGCATCGGGTTCATGCTATATTGGACATGGTACAAGACAATGAAGTGATAGACTCCCTTCAGTCCACCGAGGAGTGTGATGTTATGCAACATTCCGACCATGACTCAGAATCAGAGGCTGAGCTGTTGCCAGAGCTTGATGACGAGTTTATCGATTGTAAAACTGGATATGTGTGCAGAGATAAGAGAGTCATATCAAAGAATCCAAAGCTGTCGCCTTCAGTTAATACGGCGAAAATTAAAGAAGTCACAAGCTTGAGGAAGCGTAAGACCGAGTCACGTGTTCACTGCGCGAGACCGAAAAACGCTTGGCAACTGTTATTCTCCGATGACCTTTTAGAACTCATCGTCGCTTCAACCAACGAAAAAATATCGAACATCGGGGGACATTCCCAACTGACGACGGTCAAAGAAATAAAGACGCTTATCGGCATTCTGTATTTGCACGGCATAATGAGACCGACGCATCAGAAATGTGATGACCTTTGGAGCCATGAGTTCGGAGCACCGTGCGTCAATCGAGCAATGAAGCTCGATAGATTCAAATTCCTTCTCAAATACATAAGCTTCGACAGCGAACGCGATGACAGTATAATACAGTATGACATTATGAAACGTGTGCGTAAAGTGTTCGAGATCTTTGCCATGAATTGTAGAACAGTATACGAGGTTGGGAATATTGTGGTTATTGATGAGATCATTGTGCCAGTTTACGGGCCTTGTCCGTTTCGATACGATATCGATAAGAAACCGTTGAAACGGGGCGTTAAAATGGTTTTGCTTGTTGACTCTTCGACTTTCTACGTCAGCAATATGGATGTTGTCACCGATCCTTACTTTGGTGCTGAGGATATTGTGAAGAAGATTAGTCAACATCTGACCGGTTCTCGGCGTACTGTCGTAGTTGACAGCTGGTTTGCTTCACTCAACTTGATGCAGACCCTAAAAAACGAATATCAGTTGCACACTATCGCGGCATTGAACCCTAATAGTGACTTGATACCTCCGCTATTTCTATCGCAGTACAGAAAGAGTCGATCGTTCATGTCTGGCTTTATAGACGAAGAAGTTTCAATTACATCATACGTGAACTCTGAGTCCAAGACGACAAATGTTATGACAAACGAACCTCGGTATTATCGAAAGGGTCACATAAACCATACTACTGTGGTGTCTGTTTATAAGAAGAACCAGTCTGCGGTCGAAGTTGTTGATGTCCTCATGCACTATTACACCACAATGCAGCATACAAATGATTGGACGTTATCTCTGTTCTTCACTTTGTTGAACATCGCATCAATCAATGCGCAAGCCATCTGGAGCTCGCAGCATTCTAGAATATCGCAGCGTCGTTTATTTATTAAAGATTTGGCGTTGAACCTTCTGGGAAATGACGAAGCTGAAAGTCATCCATCCTTTTCAATGTCACCTGGTCACGCAGTTGTCAAGAAACGGAATTTCTCTCTGCTTGGCGAAGTCGGGGCTGATAGCGAAAAGGAGGAAGAGGAAGATGAGGAAGATTTAAATGACGCGAGTACATTCCCGAAAGTTCCCAATATACCCGAGGTCTCCATCACGGTCATGCGCCCTACAGGTGAAACACTTCACTCGAAGCAAGGCATCCATCAACTTGCGTCTAAGGATTGCCTTGTTTGTGGAAGATCATACCGTTACTCTCACAACGCACGCCGACACGAACTCAACTCCCACGGCTTCGATAGGTACACAAACAAAATAACACCCAAGAAGACTCATTCCGCGGGAATGCAACCCAAATTTAGACCAAATCCATTCAACCCTAAAGCTCGCCTCATGCCGAACCCCGTTAACCAGAAAATGCAATTTATGTCCCAAAATAATCCCCATAAAATGATGGCCAGAAGCAAGGTTGTCACACCTGCGAGGCCTATTCCAATAAAAACAGTCAAATCACAAAACGTGTTACCTTACCCGCTTAGAATCAAAGCCCTCAAGGACCTACAAATAAAGAAGAAAGAACCTCAGATTTTGAAAACCTTACTTACTTCAAAGCCAGAAGTTTTAGTGTCGGAGCCTGAGATATTGAATTCGGGCCCGGAAAGTCCAGAGACGTTAATATCGGAGCCAGAAATTGCATCATTTCAAGTAGAAACTATACTCTCGGAGCCCGACGTTTACGGCCCGCAGCCAGAGGATGACGAAGACGATACAGATATGCATAACAATCAAGGCCAAAACTACGACACTGTTGAAATGGACTCTGAAAATGAAATCGAAATTGCTCGTCAACAAGCCAACGAAGCTAATCAAGCGGACGGCCAAGAACAAGGTGACGAAGAAGAAAATGTTGAACGAGAACAGGAAAGTCATATAGAGGGACACCGGAGCAATCATGAAAAGGATGGTGAAAACGGTGATAACAATGATGACACCGTTGAAAGTCAACATAATATGGAAATGGATGAAAATATTCACATTAAGTCTGAGAATTATACTAAAGATGGCGAGGATGAAGAGGCTGTACAAGAAGAAAGAGAGAATGAAGAACACGACAATGAAGAAAATATTCACGATGGACACGAGGAAGATGATGATGATGAGCTTCACATGTCTTTAGCACCGGTCGTAGAAATTAATGAGGACTTGCAAAACAACTCTGAGTTCACCAAGGACGGTAATGACGAAGAAGAAGAACTCGAAGAGACTGTTGACCCTAATGACACTGTTGACGAAGAACCGGTCAAAGAACTGGATCCAGATAAGACGTACGTCACCAAGACACAAAGGGATTTTATTCTCAAATATCGTGATGTAATAGAGCAGATTAATACGAAACGTTGCCTTTGCTGTGACAGGGAACATCCTCGTCGTAAAGCGGTTATACAGCATTTGCAGAAAAATGGGCATCGCGTGCCAAAACATACGTGCTACAATTGTGTGATAACATTTGGTCACATAGGTGCTCTACTCAGCCATATGCGAGCTAACGCTTGTACGGATGTGTGGAAAATTATTTACAATGAAAATGGTATCACTGATGATTTGGTCCTAGAAAACGAACCCAAGGAAGACAAGTCACAGTACAAAGATATTTTAAGTGCTAGATCGTACGCATGCAAAATGTGCCCAGCAAAATTCAACCTTAAGCAGTTTATAATGCGACACGTTTTAGAGGTACATGAAGATGGACAGTCGAGGATGCCGCTGGTATGCGTGCATTGCCGCAATAGATTCAAGGACAAGAACTTGCTGAAGAAACATATTCGCAAAGGCGATTGTATGGTTTATATATCCTGCGATCTGTGCTCAGAGAAGTTCATACACTTGCAAGATTTCAACGATCACGCCTTGTCGGTTCACGCTGGCAGTTTTGATCCGGAAAATCAAAGTAAATGCGTGGACGGACGTCCCACCGACTGCCCCCTATGTGGAAAGAAGAACAATAACTATCCTAACTTAGTGAAACATTTGAAGATAATACACAATGAAGAGAAGCCTCATTACTGCCAACACTGTGACGCTAAATTCGAACAGACCACAGAACTCAACAAACACATTTACATGGAGCATTCCGATAGGAGTTTAGGCATGTCTGAGCCCGACATGTCCCTTGTGAAGGAAGAGGCAGACGAGTATCATTATTCTTGTACGGAGTGCAACGCAATTTTTGAGACGGTCGACGCCTGGACAGATCACCAAGTAGCTGAACACAATCAGGTCGCGCACCACTGTGACCAATGCGAGAAGAAGTTTTTGCGTCCCTCCGAACTGGCGGAACACAAGAACACGCATTTGAGGGTCAAGTTCTACCCTTGCAATGGCTGCCCCAACTCTTACAGTTCTCCCATAAAACTGGCTGAACACATGCAACAAGTGCATCCGGGGATGGCGCCAATGCCTAGCGACACTGAATTCTTCTGTGACATATGCGTTCGATCATTCAAGAGTCGTCAAGCGTATTCCAATCACATGCGCATTCATTCCAAAGTCCCGACCACCAATAGAAAGCCGGGGGATCCAAAAGGATTTGCCCCACAGATCATTGGTAAACCCATCAAGCACATATCGGTGTCTCAACCAGGGTTTATGTCATTTAAGCCCAGCTCTAACGTACCGAATGCTCCGTATTCATGCGACATCTGTGGTAAGGGCTTCATGCATAAGAAAAATATATGGAAGCACAAGAAAGTGTTGCATGCTGACTTATTGCACGATAGAAACGACAGTGAAGAAAATACTATGCACGCCTCCACCGAAGAGGAAGAGTTCAATCCCGAGGAGAACGGCGCAATTCTTTCCACTCCGCAATTCAATAGTTTTAATTTTAGTAGTTTCTCTAACAACGTACCGCAACCGCAATCGCTACCGCAACCGCAACCGCAAACTCCTCCCGAGATGCCGTATTCGTGCGAGTTATGTTACAAACGATTCCCGCTTCGTACGAGTTTGTGGAAACACAAACGCGCTAAGCACGGAATTGTTGCTAACAACAGCAGTGACATGCATCCGCAGCAGGTTATTGGGGAAGGCAGCAGCGGTAGCAGTAGATCTAGCTGCACTATTTGCAAAATAACGTTCTCGGACAAGAAATCTTATTACCGTCATAGGAAGAACGTCCACAAATCCACAGTCCAAATGTGTAAGATATGCGGGAAACCTCTAAACTCGACGCTGGAGTTGTATGAGCATCTGAAGGCCGCGCACGCGAGGGAGCTTCTTGGTTACAACGCCACCCAGGGGTCTAGTAAACCCCAGCCAGAAGTACCTCAAGATATCGAACCGGAATACGACAACGAGTCAGAAACTATTGATCCCAACGTTGACTACCAAGCGCGGTATCCGTGCGACACATGTGGAAAGCAATTTGTTGGTTTACTGGCGTTGCAGAATCACCAATGCCTCAATCAAATGCAGTCGCAGCCGCAGACTTTTGATTGTGAGATTTGCCACAAGAGTTACAGCTCCATTTCGGCTTTGAAGAGCCACCGCGGTTGGCATTTACGCTCGCCGGACGGAAAGGCGGCGGCCAATAACTCCGGGCTCTGGATGCCTCAGCATAAAGTGACGAGTAAGATAAGCAAACATGAAATTATTGATCCATCACAACTGGCGCGCGTCTCTCTCACTGCATCGACCCCACCACCGCCTGCGACCACGCCTAGCGCTGCGGCGGCCAAGAGACGGTTACCCCCAGAAGTGGAAGTAACCGTCGTTAACCCAAATAAGAAGTTACGCTCGGACGATTCCATCGAAATGGACCAACAGAACTGCGCGATCGACGACCGGTACTGCACGATTTGCGACAAGGAGTTCACGAAGCGCGCGGCGTACCAACGTCATATGGACGAAGTGCATCAGCCCAACTCCGTATTCTGCCCGGTTTGTGACAAGAGCTTCACAAGGAAGTCTACATTGCTTATTCATATGAAGAAACACTACGAGAGCGGGGAAGGTAGTTCGTCTTTAGTTCAGAACGAACAGGAAGAAGAGACGCACACGTGCGACGTTTGTGAGCTTCAGTTCGACACTGAGCAAGGCATGCTAACGCACAAAGCTATGAACCATGGTGACGAATCGGAAGCGGAAGACTCTGATGATGACGGGCATGTGCCTATAGCTCAGCCGGGAGAGTTTACCTGTGGGCAATGTGGCGATGGAGTGGCCACTCCGAGAGACTTGATTGCCCATCGATCGATGCACGCCACTCCCACCAAATTCTTCTGTAATATCTGCAAGGTATACTTCTCTCGGGCGCTAGACCTCTCCTCCCATACGCGAGCGAGACACGCTGACAACGAGAAAGTTTTTTTCCCATGTGCCATGTGCGATAGATTTTATATGAACAAGAAAAGCTTACAACGACACATCGAGATGGTACACTGA
- Protein Sequence
- MSGNYDRVCRLCLSSRGELLPIFPTTSTDDSEPPVLASKIKDCVSVQINETDDLPTNVCRKCTDNVNNWHIFKAVCERTQIKLQSLRDSSQLEEIQVKSEPLSDEAYDDGVVIDGSYPDENAASKVQPEGPPILASLGLTPRSDKKVDPRMDWHRVHAILDMVQDNEVIDSLQSTEECDVMQHSDHDSESEAELLPELDDEFIDCKTGYVCRDKRVISKNPKLSPSVNTAKIKEVTSLRKRKTESRVHCARPKNAWQLLFSDDLLELIVASTNEKISNIGGHSQLTTVKEIKTLIGILYLHGIMRPTHQKCDDLWSHEFGAPCVNRAMKLDRFKFLLKYISFDSERDDSIIQYDIMKRVRKVFEIFAMNCRTVYEVGNIVVIDEIIVPVYGPCPFRYDIDKKPLKRGVKMVLLVDSSTFYVSNMDVVTDPYFGAEDIVKKISQHLTGSRRTVVVDSWFASLNLMQTLKNEYQLHTIAALNPNSDLIPPLFLSQYRKSRSFMSGFIDEEVSITSYVNSESKTTNVMTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMHYYTTMQHTNDWTLSLFFTLLNIASINAQAIWSSQHSRISQRRLFIKDLALNLLGNDEAESHPSFSMSPGHAVVKKRNFSLLGEVGADSEKEEEEDEEDLNDASTFPKVPNIPEVSITVMRPTGETLHSKQGIHQLASKDCLVCGRSYRYSHNARRHELNSHGFDRYTNKITPKKTHSAGMQPKFRPNPFNPKARLMPNPVNQKMQFMSQNNPHKMMARSKVVTPARPIPIKTVKSQNVLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDVYGPQPEDDEDDTDMHNNQGQNYDTVEMDSENEIEIARQQANEANQADGQEQGDEEENVEREQESHIEGHRSNHEKDGENGDNNDDTVESQHNMEMDENIHIKSENYTKDGEDEEAVQEERENEEHDNEENIHDGHEEDDDDELHMSLAPVVEINEDLQNNSEFTKDGNDEEEELEETVDPNDTVDEEPVKELDPDKTYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHRVPKHTCYNCVITFGHIGALLSHMRANACTDVWKIIYNENGITDDLVLENEPKEDKSQYKDILSARSYACKMCPAKFNLKQFIMRHVLEVHEDGQSRMPLVCVHCRNRFKDKNLLKKHIRKGDCMVYISCDLCSEKFIHLQDFNDHALSVHAGSFDPENQSKCVDGRPTDCPLCGKKNNNYPNLVKHLKIIHNEEKPHYCQHCDAKFEQTTELNKHIYMEHSDRSLGMSEPDMSLVKEEADEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNGCPNSYSSPIKLAEHMQQVHPGMAPMPSDTEFFCDICVRSFKSRQAYSNHMRIHSKVPTTNRKPGDPKGFAPQIIGKPIKHISVSQPGFMSFKPSSNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLHDRNDSEENTMHASTEEEEFNPEENGAILSTPQFNSFNFSSFSNNVPQPQSLPQPQPQTPPEMPYSCELCYKRFPLRTSLWKHKRAKHGIVANNSSDMHPQQVIGEGSSGSSRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNATQGSSKPQPEVPQDIEPEYDNESETIDPNVDYQARYPCDTCGKQFVGLLALQNHQCLNQMQSQPQTFDCEICHKSYSSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEIIDPSQLARVSLTASTPPPPATTPSAAAAKRRLPPEVEVTVVNPNKKLRSDDSIEMDQQNCAIDDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSLVQNEQEEETHTCDVCELQFDTEQGMLTHKAMNHGDESEAEDSDDDGHVPIAQPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFSRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -