Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997823.1:1110857-1117355[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8e-07 8.1e-05 23.8 0.7 1 23 152 174 152 174 0.98

2 14 0.064 6.5 8.4 1.7 1 23 180 203 180 203 0.94

3 14 0.00014 0.015 16.7 3.1 1 23 209 231 209 231 0.96

4 14 2.3e-07 2.4e-05 25.5 1.8 1 23 236 258 236 258 0.99

5 14 0.037 3.7 9.1 7.2 1 23 264 286 264 286 0.98

6 14 3.2e-07 3.2e-05 25.1 0.9 1 23 292 315 292 315 0.95

7 14 1.6e-05 0.0016 19.7 3.2 1 23 321 343 321 343 0.97

8 14 1.6e-05 0.0016 19.7 0.6 1 23 349 371 349 371 0.98

9 14 0.00031 0.032 15.7 2.6 1 23 377 399 377 399 0.99

10 14 1.2e-07 1.3e-05 26.4 0.6 1 23 405 427 405 427 0.98

11 14 3.6e-06 0.00036 21.8 2.7 1 23 433 455 433 455 0.97

12 14 0.12 12 7.5 3.0 1 23 461 480 461 480 0.94

13 14 2.2e-06 0.00022 22.4 1.0 1 23 486 508 486 508 0.98

14 14 0.012 1.2 10.7 1.7 1 21 514 534 514 535 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8e-07	8.1e-05	23.8	0.7	1	23	152	174	152	174	0.98
2	14	0.064	6.5	8.4	1.7	1	23	180	203	180	203	0.94
3	14	0.00014	0.015	16.7	3.1	1	23	209	231	209	231	0.96
4	14	2.3e-07	2.4e-05	25.5	1.8	1	23	236	258	236	258	0.99
5	14	0.037	3.7	9.1	7.2	1	23	264	286	264	286	0.98
6	14	3.2e-07	3.2e-05	25.1	0.9	1	23	292	315	292	315	0.95
7	14	1.6e-05	0.0016	19.7	3.2	1	23	321	343	321	343	0.97
8	14	1.6e-05	0.0016	19.7	0.6	1	23	349	371	349	371	0.98
9	14	0.00031	0.032	15.7	2.6	1	23	377	399	377	399	0.99
10	14	1.2e-07	1.3e-05	26.4	0.6	1	23	405	427	405	427	0.98
11	14	3.6e-06	0.00036	21.8	2.7	1	23	433	455	433	455	0.97
12	14	0.12	12	7.5	3.0	1	23	461	480	461	480	0.94
13	14	2.2e-06	0.00022	22.4	1.0	1	23	486	508	486	508	0.98
14	14	0.012	1.2	10.7	1.7	1	21	514	534	514	535	0.94

Sequence Information

Coding Sequence: ATGTCTAAATTGTGGAACACTAGTAGTATGTGCCGGTGCTGTCATTCTCAAGGCGAATTTTATAATACTAAATTAAATACGGACGAAGGAAATGCAGTTGATTACGATGTTTTACTTCGAGAGACTTTTAATATAATTATGAAACCTTTAAAAGAGTTGGCTTCATATGGAGTCTGTGGGTTGTGCGAAACAAGGATAAAGGATGCGGTACTCTTTAAACAGCAAGTACTGATGTGTGAGAATAAATTAAAGGATTATACTGGGTTTACCAATTACGAAAAGAAATTCCGTCAATTGGAAATCTTTATTGACCCTGACGATATGGATGACCAGCCTCTATCGGTTCTGAGGACAAGTGTGACTGGATCAGAGAGTTTGGATGACCATGGAATGGACCAGGAATGGACAGTTCTGAATGAAGACGAACCGTCGAAGCGTAAAAGAGACAAAAAATACACGTGTAACGTATGCGAAAAGAAATTCTCTTACAACGGTTCTCTGGAGGTTCACATGAAACTCCATTCCGGGGACATAACGTACCCTTGCCGGCTATGCGACACAAATCACACGAACAACAGAGAGCTCACCAAACACATCACTCTCTCACACTTAGTCGACAACAAATACCTTTGCACTCTCTGCGAAAAGCACTTCGACAAGGCGAAGCTATTAAAAAAACATATCAAAATGCATTTCGCGGACAAATTCCAGTGTAGCGATTGCGGGAAAGACTTCCAGAGGAAGAAGGGTCTTAAGGAGCACATGAAAACACACACTGGGGAAAAGAAGTTCACCTGTCGCGTGTGCTGCAAGTCTTTCGGTCACAACCAGACTTTGAAGTCGCACATGTACACTCACACAGGGGAACGCCCGTACGTCTGCGACGTCTGCGGACGATCGTTCCCGCAACGGACGCACTTAAAACGACACATCTTCATCATCCATACCGGAGTTAAACCCCACTCGTGTAACGTTTGCAAAAAACGGTTTTCCAGCAAAAGTTATTTAGCGATACACGAACGACAGCACACTGGGGAGAAACCGTACTCTTGCGAAGTGTGCCAAAAGGACTTCACCGCGTACACGACTTTGAAAGTCCATATGAGAGTGCACACCGGGTTTAAGCCGTATCGTTGCAGCTTTTGCAGCCGCCAGTTCGCGCAAATGGCTAGCTATAAACTCCACCAACGGACGCATACGGGCGAGAAACCGTTTTCGTGTAACGTTTGCAAAAAACCGTTTTCGGATAACGGTTATTTGAAAATTCATATGCGAGTGCATTCCGGCGAGAAACCGTTTGCGTGCGACGTTTGCAAAAGATGCTTTCGCGAGACTGGACAGTTGAAGCGGCATATGCGGGTGCACAGCGGCGTTAAGCCTTACACCTGTAAAGTGTGCAACAAGCAAATAGGGAACCTCTCCAAGCATATGCGAGTGCACTCGGAGGACAGGCCGTTCAGCTGCACGGTTTGTAGCAAGCAGTTCTCCATTAGCGACAACTTGAAGTTGCATATGCGAATTCATACTGGCGAAAAACCGTTCTCGTGCGACGCTTGTAACTCCTATTTTAGTCAAAGCAGCGGATTGAAGAGGCATAGGTGTGCGATCTTGAAACTGGGTGAAGCTAGCGGTCCTAGCTAA
Protein Sequence: MSKLWNTSSMCRCCHSQGEFYNTKLNTDEGNAVDYDVLLRETFNIIMKPLKELASYGVCGLCETRIKDAVLFKQQVLMCENKLKDYTGFTNYEKKFRQLEIFIDPDDMDDQPLSVLRTSVTGSESLDDHGMDQEWTVLNEDEPSKRKRDKKYTCNVCEKKFSYNGSLEVHMKLHSGDITYPCRLCDTNHTNNRELTKHITLSHLVDNKYLCTLCEKHFDKAKLLKKHIKMHFADKFQCSDCGKDFQRKKGLKEHMKTHTGEKKFTCRVCCKSFGHNQTLKSHMYTHTGERPYVCDVCGRSFPQRTHLKRHIFIIHTGVKPHSCNVCKKRFSSKSYLAIHERQHTGEKPYSCEVCQKDFTAYTTLKVHMRVHTGFKPYRCSFCSRQFAQMASYKLHQRTHTGEKPFSCNVCKKPFSDNGYLKIHMRVHSGEKPFACDVCKRCFRETGQLKRHMRVHSGVKPYTCKVCNKQIGNLSKHMRVHSEDRPFSCTVCSKQFSISDNLKLHMRIHTGEKPFSCDACNSYFSQSSGLKRHRCAILKLGEASGPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -