Ccur001324.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- Dscam2
- Assembly
- GCA_905475355.1
- Location
- FR997812.1:6973553-6977565[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-10 1.2e-06 29.1 0.0 4 38 105 139 103 143 0.94
Sequence Information
- Coding Sequence
- ATGGCCTCACAGAAGGAAGTTGACCGCCGATCTGAAGACACAGGTTTAGTGCCCGCGATGAATTTGGGGGTGACCCGACACAGTAGTGGGTCAGCTGCTGAGTCAGCCTCCTCCAGTTACATGGAAGAATCGAAGCCAGAACTGGTGTACTGGTTCTCGGAGCAGACTTTGCAGCCAGGGCCGAGCGTCTCGCTCAAATGCGTTGCAATGGGACACCCTCCGCCGCAGTTCTCTTGGCTCTTAGATGGCTTTCCTATTCCAACTAACTCCAGAATCATAGAGCCGCAGAAGCGGAAGCAGTACGCCTCTGCTCAACTAGAAGCTGCGCTTCTAGCTATAAATGAAGGGACCAGCATATACGAAGCTTCAAAAACCTATGGCATACCAGGGACAACTCTGCGTGACAAGAGAAATAATAAATATATAAATGAACATTGTGGAAAACAAACGGTTTTAACGACGAGGAAGAAAAAAGACTGGTAG
- Protein Sequence
- MASQKEVDRRSEDTGLVPAMNLGVTRHSSGSAAESASSSYMEESKPELVYWFSEQTLQPGPSVSLKCVAMGHPPPQFSWLLDGFPIPTNSRIIEPQKRKQYASAQLEAALLAINEGTSIYEASKTYGIPGTTLRDKRNNKYINEHCGKQTVLTTRKKKDW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -