Ccur027371.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- -
- Assembly
- GCA_905475355.1
- Location
- FR997805.1:684690-695768[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.2e-11 8.1e-08 32.8 0.0 4 39 144 180 142 184 0.90 2 4 2.7e-11 4.3e-08 33.7 0.3 2 39 196 233 195 237 0.92 3 4 7.3e-15 1.2e-11 45.1 0.0 2 45 251 295 250 295 0.96 4 4 1.5e-18 2.4e-15 56.9 0.0 1 43 302 345 302 347 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGATACGGTGTCTCGCAAGTGAAGTGCGAACCGCTATCTGACGAAGAGGATAGTGACATTCAGTTGGCGCAGAGTTATTTATCTATACAGGGTGGAGGGCTTGAGGAGCTGACCCCAGCAGGGCCAGCTGCAACGCCAGTATGCGTGAAGCAGGAGCGAGCGGAATCGCCACCTGCCGCCACATTCGAGACTCTGGAGTCCACACCTCACGCCACGAGTTCAACCTTAATTAATCGACACATGGCAGAGCTGACGTCAGACGGAATAACTGGTTCCACTGACTTCATGCCATTATTGTCTGTGAAAGATGAACCTTTATCAGAAGGGGAGCAACACCACCTTAGCGGCGAAGATACGAGTGATTCCTCGGGTAGACAGGCCTCGCCGGCCTTGCGGGCCAGTCCCAAGAGTTGGACGCAGCTGGACATGGACCGGGCTCTGGAGGCACTCAAGGGACATCAGATGAGTCTCACGAAGGCTTCAGCGACGTACGGCATTCCTTCGACGACACTGTGGCAGCGTGCGCACCGGCTGGGCATCGACACGCCCAAGAAGGAAGGAGCTGCCAAGACGTGGAGCGAGGCCGACCTGCGCGGCGCATTGCACGCACTACGGGCGGGGGCGATCTCTGCCAACAAGGCCAGCAAAGCCTACGGCATCCCAAGCAGCACTCTGTACAAGATAGCGCGCCGAGAGGGCATTCGTCTCTCCGCGCCGTTCAACGCCGCACCCACGGCTTGGCGACGAGGGGATCTGCAGCTTGCGCTTGCTTCCATTCGCTGCGGGGCTTCGTCTGTCCAGAGAGCTGCCTCGCAGTACGGCATTCCTACTGGCACTCTGTATGGGAGATGTAAACGTGAAGGTATCGAACTTTCTCGTTCAAACCCTACTCCTTGGTCTGAGGATGCTATGGGAGAAGCTCTTGAGGCAGTCAGGGTTGGCCAAATGTCAATAAATCAAGCTGCAATACATTACAACTTGCCATATTCGTCGCTCTATGGAAGGTTCAAGAGATGTCGTTATCAGATGCAGGACACTATACCTGATCAAGTACAGCAACCTCAAACCCCCAAGCCCAACGAGATGGACCAACAGGGGCCCCATGTACAGTGCTACCAACAAACACCGACCACCGTCCATTATCTTTCCGACCAAACACAAATGTACATGCATACATTGCGGGATTGTACAGAAGCAACCGGTTACAATGAGCAATACGGGCAAGCCGTGTACTTCAACCAGTTTAGTAGCATCGCAACTAGCTGA
- Protein Sequence
- MPGYGVSQVKCEPLSDEEDSDIQLAQSYLSIQGGGLEELTPAGPAATPVCVKQERAESPPAATFETLESTPHATSSTLINRHMAELTSDGITGSTDFMPLLSVKDEPLSEGEQHHLSGEDTSDSSGRQASPALRASPKSWTQLDMDRALEALKGHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKTWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRGDLQLALASIRCGASSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCRYQMQDTIPDQVQQPQTPKPNEMDQQGPHVQCYQQTPTTVHYLSDQTQMYMHTLRDCTEATGYNEQYGQAVYFNQFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -