Calb009461.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- pnr
- Assembly
- GCA_001014945.1
- Location
- JXOV01010282.1:36045-41574[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.37 1.7e+03 -1.2 0.1 22 27 432 437 427 444 0.70 2 3 0.17 8e+02 -0.2 1.4 1 26 433 455 433 458 0.67 3 3 5.2e-18 2.4e-14 52.7 9.0 1 35 489 522 489 523 0.97
Sequence Information
- Coding Sequence
- ATGGAACAGCAGCATCAAGAGGCACTGGAAATGGAGAAGGAAGAGACACCTGACCACAAGAGCCAACAGCACCAGCCAGACGTGGTTAGGGAGGAGATTGTGGTCGAATCGAACTCACAAATCCATTTAGTGGTGCACCAACAAGCCGAAGATCAACCCTCGACGATCACCACCTCAACCACAGTCACCAGTGACGTGATCACATCTGCTGCGCAGCCAATTAACGTTATCACGACGCAGAAGACGCGCATGATTACAACGTCGGGTAATATTCGAGAGATAAACGTCAGCGAGGCGAATGACATAGGCAACCACCAGTACGAGGGGAGTAATGAGTACCAGCAGAAGGGTCGCGAGACTCAGATCCACGAAGGCTATCCGATCAGTTCAGAGGGTCTTCAGCCTGTCTACGTGACGTCACACAGAAATTCCACACCCGGAGCGACTCCAGTCAGCGTCAGTTCTGGCATCATTCCCCCGGAACACACCCAGATCATCGTCAGTCCGGAGCTGGCCggaaaaattgagaaaaacaaTGGAGAAACGGCACACGTCGTGTCAATGGGTCCCCCGCAAATCTGCCTTCCACAAGGACCTCAGCAAAATCATGACCCGCAAACTGTTTATATGACCGAAGATGCCTACCGCCAGTTGATCAAATACGAAGAATACGAGAGTGTTGACCAGCATCCGAGTCACCGGAACTCGCACCCACCTCTGACGCACCACTACCAGTCCCAGCAGTACAGCCGATACCCGGGCTCGCCCAACCGCCTCAGCGAGGTGAAGGAGGAGATCCAGATCTACGAGACGTCGGAGATTGTGTCGCAGGTGCCAATAACCACAGAAAACGGAACAGTCCTGGAGCCGAAGCTGGAATACCATAATCTGGAACCGATTTACTCAGCGGAACAGTATCCCTCACCCACTTCTGGTTATCCATATCTACCGAGCTCTTCTGGCCCTGGCAAGGAGTACACCTTCCTCTCCGGTCCAAGCAACCTGGTCTACAAGGACGCCTCCCTGGCATCGACATCCTATCCAAGAAACCAACAATATTACCAAAATCTGCCCAACGGCCAGAACATGTACGAGACAACCACAGTAGCTGCTGGCCCTTCATCAGCATCGCAGCATCGGTTTCCTTACAACCATCAAGGCTACTACAACGTTGACCAATATcCCGTAATTTTAGATGGCCCCCTTACTTCGGAATACGGTGTGAATGGCTGGTCCTCAGGTCCCGGCTACGAAGAGCACAACGGGCAGCTGTTGGCCGCGAACGAAGCTAGGGAGTGTGTGCAGTGCGGTAGTCCGGCTGCTGCCCATCGCATGGAAACTGGGCAGTACATTTGCAATATATGCGTCAACCGATCCCATCCCATGACCAGCAGAGTCCCCAGTCGACCGCCCAAGCCAAAACCAGCCCCGGCGCCAAACAACAATCGCAGGACGGGAGTTGTCTGTGCCAATTGcaacaccaccaccaccactcTCTGGCGAAGGAACAACGCCGGTGAACCAGTGTGCAACGCCTGCGGATTGTActataaattacataataCCAATAGACCTACCTCGATGAGGAAAGAGGGAGTCCAGACGCGTAAACGGAAACCAAAGAGTGCCAATACAGCTGTGCCAAAAACCCAACCAAAGAAAATATTGCCATCGATGATCCAAAATACGTCCGAGATAGGGAAGATTCACCAGCAGATGCAGCATCAGCCACCGGTGCAGTCGCATCCCCCGGAACTGAATACTTACATTGCGTCATCCAGTCCGGCACCACCCGCCTTGCCTCGACACATTAATCTGGAGGGACGGTCGCTGAACAACGGGGAGACGACCACCAGTGTTATAACCAGTACCGGAGTGGCGGAGAGGGCGAACAATCAGCgccaacagcagcagcagagccAGTCCCAGCCACCTCTGCAACAGAGCCAAATGAACTAG
- Protein Sequence
- MEQQHQEALEMEKEETPDHKSQQHQPDVVREEIVVESNSQIHLVVHQQAEDQPSTITTSTTVTSDVITSAAQPINVITTQKTRMITTSGNIREINVSEANDIGNHQYEGSNEYQQKGRETQIHEGYPISSEGLQPVYVTSHRNSTPGATPVSVSSGIIPPEHTQIIVSPELAGKIEKNNGETAHVVSMGPPQICLPQGPQQNHDPQTVYMTEDAYRQLIKYEEYESVDQHPSHRNSHPPLTHHYQSQQYSRYPGSPNRLSEVKEEIQIYETSEIVSQVPITTENGTVLEPKLEYHNLEPIYSAEQYPSPTSGYPYLPSSSGPGKEYTFLSGPSNLVYKDASLASTSYPRNQQYYQNLPNGQNMYETTTVAAGPSSASQHRFPYNHQGYYNVDQYPVILDGPLTSEYGVNGWSSGPGYEEHNGQLLAANEARECVQCGSPAAAHRMETGQYICNICVNRSHPMTSRVPSRPPKPKPAPAPNNNRRTGVVCANCNTTTTTLWRRNNAGEPVCNACGLYYKLHNTNRPTSMRKEGVQTRKRKPKSANTAVPKTQPKKILPSMIQNTSEIGKIHQQMQHQPPVQSHPPELNTYIASSSPAPPALPRHINLEGRSLNNGETTTSVITSTGVAERANNQRQQQQQSQSQPPLQQSQMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -