Calb012393.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- gata4
- Assembly
- GCA_001014945.1
- Location
- JXOV01014993.1:6397-13150[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-18 1.1e-14 53.8 3.2 1 34 167 199 167 201 0.97 2 2 6.4e-18 3e-14 52.4 5.0 1 35 221 254 221 255 0.97
Sequence Information
- Coding Sequence
- ATGTTTGATAAATTCCCGCAAATAATGAACAAAACCGTTAGTTTTGGCCAGACTGTCGAGGATCCCAAATTCGTATTTCCGACGAATTTCAATCCATTCAAAGCGTCGTCTTTTGGAGTCAGTGGAGCGGTGACGAGTGTGACTGGAATGCAGTACTTCCAAAACAGCCCCACGCAAGACATGTGGTCCGGACACGTTCTGCCCACCTCCAGTGAAGACTACAACTCATCCAAGTTACCGGCCTTTCAACGGTTCACCTCTAATCCAGGATTCAGTTCGACTTCCACCTCCAGGGCGAGCCATTTCCAGGCCTTGAACAATATCTCGGGACAAGTTGATTCCTGGGCCAACCAATATGACCAATCCTATGGAAATGTGTCATTAAAATCGACCAACAATAAGGTTAGGACAACGCCTTACAACATCACGTCTTCAGCAGCAGCCTCATTGTCAGCCTTTGTCAGTCTGGAGGCAGATTTGTTTACGGAAGGGCGCGAATGCGTGAATTGTGGCGCAATTTCGACGCCCTTGTGGCGTCGCGACGGCACCGGTCATTATTTGTGTAATGCGTGTGGACTTTATCACAAGATGAATGGCATGAACCGACCCCTGGTGAAGCAACCGAGACGATTGAGCGCCTCAAGACGTGTGGGACTATCCTGTTCCAATTGTCGCACCAATCAGACGTCTCTGTGGCGTCGCAATCAAATTGGTGAACCTGTCTGCAACGCATGTGGACTTTATTACAAGCTGCACAACGTCAATAGACCGATTACAATGAAGAAAGATACCATTCAGCAACGGAAACGAAAACCAAAGGGTAGTAAGTCTGAAAAGAACTCAAATAATAATCAGTCATCGACTTCAGAAGCTAATAATGATCGTTCTTCTGCCCGTCAAATGAATGTGACGACAATTACAACCGCTTCGACGACAAGCAGTATGATTTCCACCCCTTCACCTCAAATGGGGGTGACTTCGATCCAGTCAGTGAGTGCGACGCCTCCTCCGTTGACGCCAAATTCTCAACATTCGCAATCTTCACCGGTGAGCAAATACAGCGGTGGATCCGGGGGCAAGTTCTTTGGAGTGGGCAACGGGTACATGAACCACGCGCCCAGCAACCTGATGAGCCCAAATTACAGTCCTCCTCAGCACGATAACATGTACTTGTCCTTCCCAAACGAGGGCTGCGACTTTGGTGGAAAATACCGCACTTTGAAGACGGAACAGGTGACCAATTATCACGGGATGTCCACTTCCCGGAGCCCATCCGTTGATGAGGAACGAGAAATGATCCCCCACAGCTTGCCGTTCACTGCAAAAGTTGAGTCGGAGTAG
- Protein Sequence
- MFDKFPQIMNKTVSFGQTVEDPKFVFPTNFNPFKASSFGVSGAVTSVTGMQYFQNSPTQDMWSGHVLPTSSEDYNSSKLPAFQRFTSNPGFSSTSTSRASHFQALNNISGQVDSWANQYDQSYGNVSLKSTNNKVRTTPYNITSSAAASLSAFVSLEADLFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCRTNQTSLWRRNQIGEPVCNACGLYYKLHNVNRPITMKKDTIQQRKRKPKGSKSEKNSNNNQSSTSEANNDRSSARQMNVTTITTASTTSSMISTPSPQMGVTSIQSVSATPPPLTPNSQHSQSSPVSKYSGGSGGKFFGVGNGYMNHAPSNLMSPNYSPPQHDNMYLSFPNEGCDFGGKYRTLKTEQVTNYHGMSTSRSPSVDEEREMIPHSLPFTAKVESE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -