Calb009487.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- grn
- Assembly
- GCA_001014945.1
- Location
- JXOV01003457.1:33639-79985[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 4.9e-16 58.1 4.7 1 35 332 365 332 366 0.98 2 2 3.3e-18 1.5e-14 53.3 6.0 1 35 389 422 389 423 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACTTCAACGGCGGAAGCAGCCCGCTGGTACGACAACCCCAGGCTGGGAGGTAGTCCGAACACAGGGAATGGAGCGGGACTCGGCCATCAGGGCAACTCTGGCGTCGACGCCGACATGGGAGCGTTCTACGCGCTGGAAAATGGCAGCCACAGGAGATATTATTCAACGGGTCACTACAGTCCCCACGACACATTCCATCTATCGGCCAGTGCACCTCATTCTGCCCACAGATACTCCTTGCAATCGTCCCGATCGTCATCCTCCCGAATGCCATCCTCGCACACGAGCCCCCAAGTGTGTCGGCCGCACTTTCATGCGCCGCTCCCGTGGCTCAGCGAGCCCAAGCTGTCGGCACCGGGCAGCCCCTGGGGCAGCTCGTTCGTCTGCCCCCAGGACCCCCAAGACAAGGTTAGCCAAATCCAATCCACCACCTCGTCGAGCAGTCACAGCAGTCAGACGGGTCAGCACCTCTTCTCGTTCCCACCCACCCCACCGAAGGACTCGACACCTGACTCAGTACAAACGGGACCAGCGGAGTATCAGGCGGCAGTGAATGCATTCATGCACCAAGCGCAAGCCTCGTCAACTACCTCAGCGTCGGACACGAATTGTGGGCTGGATGTGAAGCCCTCGATCCCGAACGGCGGTGGCCAGGCGCCTAAACAACGAGAAGgtacaaacaacaacaacaacctaGTGTCTAGCAATAATtccaataacaacaacaacaactcaaGCAATAGTAGTTCGAGTAATAATCAGAATGGGGGCAGCAGTCAGAATAGTGGGCAAACGAATTTAAATGGGGGCCTGTTTGAGGTGCCGCAAAATCCTTACAACGGCTACGAGCCGAGTGGCTACAATTACCACCAGAGCCAGGCGGCGGTGAACGCCTTTCAGACGGGCAGCGCGAAAATGGCCATGAACAGTCCGCACTCGAAGCCCCAGCGGACAAAGGCCAGGACCAGTGCTGAGGGAAGGGAGTGCGTCAACTGTGGGGCGACATCGACGCCGCTGTGGCGCCGGGACGGAACCGGACACTATCTGTGTAATGCGTGTGGactgtattataaaatgaatggaCAAAATAGACCTTTAATTAAGCCAAAACGAAGACTGTCACTCCAAAGTGCCGCGAGACGGGCGGGCACGTCCTGTGCCAATTGCAAGACCACCACGACGACCCTGTGGCGGAGGAACCAGGGCGGGGAGCCCGTCTGTAACGCTTGCGGACTCTACTTCAAGCTGCACAATGTGAATCGACCACTGACGATGAAAAAGGAGGGCATCCAAACGAGAAACAGGAAGCTGTCGTCCAAGTCGAAAAAGAAGAAAGGCTCCGGTGGATGTCTGCCTCTGGGCGGACACCTGGGACTTGGCGGAGGAGTGGGAGACATCATGAAACCCCTGGACCCCTCCAAGGCCTTCGGAGGTGGATTTTCGACGTCAATGGGTCAGCACAGTCATTTGTCAGGTGGACTCCATCCAGCCCACGCGCACATGCACGGTGGCTGGTACGCCAGCGGCATGGGAGCTCTTGGAGCCTCGGGCGGACTCCAGGGCGGATTCGGATCGACCGGCGGCCTCGGTGGAGGTGTCGTCCCTCACTCGCAGTCATATCACCTCGGGCTTGGTTCAATGGGTTCATGGCGGTCTGACTACACATGA
- Protein Sequence
- MDMTSTAEAARWYDNPRLGGSPNTGNGAGLGHQGNSGVDADMGAFYALENGSHRRYYSTGHYSPHDTFHLSASAPHSAHRYSLQSSRSSSSRMPSSHTSPQVCRPHFHAPLPWLSEPKLSAPGSPWGSSFVCPQDPQDKVSQIQSTTSSSSHSSQTGQHLFSFPPTPPKDSTPDSVQTGPAEYQAAVNAFMHQAQASSTTSASDTNCGLDVKPSIPNGGGQAPKQREGTNNNNNLVSSNNSNNNNNNSSNSSSSNNQNGGSSQNSGQTNLNGGLFEVPQNPYNGYEPSGYNYHQSQAAVNAFQTGSAKMAMNSPHSKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYFKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGSGGCLPLGGHLGLGGGVGDIMKPLDPSKAFGGGFSTSMGQHSHLSGGLHPAHAHMHGGWYASGMGALGASGGLQGGFGSTGGLGGGVVPHSQSYHLGLGSMGSWRSDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -