Basic Information

Insect: Clogmia albipunctata
Gene Symbol: zfh1
Assembly: GCA_001014945.1
Location: JXOV01012522.1:30482-60361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 8.6e-05 0.007 16.8 2.8 1 23 186 208 186 208 0.98

2 24 0.0028 0.23 12.0 1.4 1 23 254 276 254 276 0.98

3 24 0.0021 0.17 12.4 1.5 1 20 282 301 282 303 0.94

4 24 0.00034 0.028 14.9 1.2 2 23 403 424 402 424 0.96

5 24 0.0004 0.033 14.7 0.9 2 23 489 510 488 510 0.96

6 24 2.6e-05 0.0021 18.4 1.2 1 23 518 541 518 541 0.97

7 24 3.6 2.9e+02 2.3 0.8 1 23 577 599 577 599 0.91

8 24 0.0058 0.47 11.1 4.4 1 23 605 627 605 627 0.97

9 24 2.5e-06 0.00021 21.6 0.7 1 23 686 708 686 708 0.98

10 24 0.00012 0.0098 16.3 1.1 1 23 714 736 714 736 0.98

11 24 0.00055 0.045 14.3 2.4 1 23 781 803 781 803 0.97

12 24 4.5e-05 0.0037 17.7 2.1 1 23 809 831 809 831 0.98

13 24 0.00086 0.07 13.7 1.0 1 23 986 1008 986 1008 0.98

14 24 0.00011 0.0086 16.5 4.8 3 23 1016 1037 1014 1037 0.97

15 24 0.00051 0.042 14.4 8.2 1 23 1069 1091 1069 1092 0.95

16 24 0.007 0.57 10.8 1.8 3 23 1137 1157 1135 1157 0.96

17 24 3.2e-05 0.0026 18.2 3.7 1 23 1163 1185 1163 1185 0.98

18 24 0.32 26 5.6 3.3 1 23 1224 1246 1224 1246 0.93

19 24 0.017 1.4 9.5 1.1 1 23 1252 1275 1252 1275 0.95

20 24 9.2e-06 0.00075 19.9 2.8 1 23 1420 1442 1420 1442 0.99

21 24 0.19 15 6.3 1.4 2 23 1513 1534 1512 1534 0.90

22 24 2.7e-05 0.0022 18.4 2.7 1 23 1540 1562 1540 1562 0.99

23 24 0.095 7.8 7.2 2.9 4 23 1617 1639 1615 1639 0.86

24 24 0.025 2 9.1 8.8 1 23 1662 1684 1662 1685 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	8.6e-05	0.007	16.8	2.8	1	23	186	208	186	208	0.98
2	24	0.0028	0.23	12.0	1.4	1	23	254	276	254	276	0.98
3	24	0.0021	0.17	12.4	1.5	1	20	282	301	282	303	0.94
4	24	0.00034	0.028	14.9	1.2	2	23	403	424	402	424	0.96
5	24	0.0004	0.033	14.7	0.9	2	23	489	510	488	510	0.96
6	24	2.6e-05	0.0021	18.4	1.2	1	23	518	541	518	541	0.97
7	24	3.6	2.9e+02	2.3	0.8	1	23	577	599	577	599	0.91
8	24	0.0058	0.47	11.1	4.4	1	23	605	627	605	627	0.97
9	24	2.5e-06	0.00021	21.6	0.7	1	23	686	708	686	708	0.98
10	24	0.00012	0.0098	16.3	1.1	1	23	714	736	714	736	0.98
11	24	0.00055	0.045	14.3	2.4	1	23	781	803	781	803	0.97
12	24	4.5e-05	0.0037	17.7	2.1	1	23	809	831	809	831	0.98
13	24	0.00086	0.07	13.7	1.0	1	23	986	1008	986	1008	0.98
14	24	0.00011	0.0086	16.5	4.8	3	23	1016	1037	1014	1037	0.97
15	24	0.00051	0.042	14.4	8.2	1	23	1069	1091	1069	1092	0.95
16	24	0.007	0.57	10.8	1.8	3	23	1137	1157	1135	1157	0.96
17	24	3.2e-05	0.0026	18.2	3.7	1	23	1163	1185	1163	1185	0.98
18	24	0.32	26	5.6	3.3	1	23	1224	1246	1224	1246	0.93
19	24	0.017	1.4	9.5	1.1	1	23	1252	1275	1252	1275	0.95
20	24	9.2e-06	0.00075	19.9	2.8	1	23	1420	1442	1420	1442	0.99
21	24	0.19	15	6.3	1.4	2	23	1513	1534	1512	1534	0.90
22	24	2.7e-05	0.0022	18.4	2.7	1	23	1540	1562	1540	1562	0.99
23	24	0.095	7.8	7.2	2.9	4	23	1617	1639	1615	1639	0.86
24	24	0.025	2	9.1	8.8	1	23	1662	1684	1662	1685	0.96

Sequence Information

Coding Sequence: ATGGACAAGTCAGGGGATTCCAATTCGGGTGATTACGATCAGCAGAAAATGCTCCTTGATTATTTGGCAATAATGCAAAACCCGAACCCAAATGCTtccagtaataataatatgaataatgGGGGTCCTGGGAGCAGTGGAGGTGGAGGCAGCAGTGGTCGGAGCAGTGTGACAGAGATGGACCCAGGCCCGGGCATGAGTAACGGCATGAACAATTCCTCGATGCACGATCTTATTCTGGCCAAGCAATATTTGGACCAATTTTCCAACGTAGGGATGAACGGAATGTCCGACTTTCCCAATGGAAATGCGAGCAGTCAGGGTGTGTCAAACAATTTCGGAAATATGGCCATGAATCCGGGGTCATCCGCCTCCTGGATGAACCAATACCCACCGCCGTATCTTCAATTGTTAAACTCCCACTTCCACAAGGAGTTTATGAGGCAGATGAACAATGTCCAGAAGAGCCAAATGGAAGCTGTTCCGCCACCGCTTCCGCCCGTAACCAAAGAAAAACCCAGGCTTCCCCAACCCTGTGCCTCCGATCCAAAGCGATACGAGTGCGAATATTGTCACAAGACTTTTGCCTCCCGTTACTACATGTCTACCCACGTGGCCACGCATTGTCCAGCAGCGCCACCCTCTGTCACCGAACCCCTGAAACGGATCACCTCCCCCGAGCAGTTGCGCCTTCTCGAGAAGTGCCAGCAGAAGAATCAACAAATGCAACAGCAGAATTACAGCTCCAAAGAGGGGAAATTCACCTGCGTCAAATGCGGACGGTGGTTCTACCAGGAGCAAGAGTTCAAACAGCATATGATGTCCCATTCCGGCGAACGACCCTACAACTGCAACCTCTGCGGGAAGCGGTATCGCTATGTCGGCAATTTGGAGACACACAAGTGCCTCGGCAAGATCAATCAAGATTCTACAACACTCCAAATCAAAACGGAAAATGGTTCCATGCCTTCACTAAATGGACGCAATATGAATGGTTTTTACCAGAATGCTCCTTCGTCTTCAAAGTATTTTTCTACACAACAACAGCAACAGGAGTCTTTGCAGAATGATCtcaagatgatgatgatgatggagaACAGTATACAATCTAACGGTGGTGGGTCTCAGGGAATGCTGAGTCCTGCAGTAGCCTCCTCTTTGGTCAACGCCTTGTCATCAGATCGCGACGACACTGGCACCAAACTCAACTGTGGACTGTGCTTCAAGAGCTTTGTGAACGAGGTCGAGCTGATGCACCACCTGAAAACGCACAAACCAGCTGATATCgacatgatgatgatgatgatgtcgGCGGCGGCATCCTCGATGCAGAACGACGATGATGAAGACGATGATagtaacaacaataaaatgggGATGAACACGAGACAGGGCTCGAAGCAAGACAATTTCAGCCAGCTGAACGGACTCACCGACAAGTTTATGAACAACGGGGGCGAATTGATGTGCGTTGTCTGCAACAAGTCCTTTAAAAACCTCATGCTTTACTACACGCACATCAAGACGCACACCGAAATGTTTCCCCAAACCTTTGTCTGTCACATCTGTAAGGAGTCCTTCAACTCTGAGGAGAGCCTTGAAATTCACAAGCGAAAGGTGCACAGTAAAACGATTATTGATACCCCACGTTACAGTTGTGAGGAGGAGCTCCAATTGAATCAGCAAGAAGAAAACGACCTCTCTACCAATTTCAGTGAAGACTGGAATTTCAAGTGTTCCACGTGTGCGGCCAAGTTCCGCGAACAGCAAGTCTTTGACTACCATTTGCTGCTCCACAAGGGGGAGCGACCTCATTCGTGTTCCATATGCGCCAAGTGCTTCAAATCCCGGTTAACATTGACTGTCCACGAGAACAGTCACAACCAAAAGATACCTCCAAAGTTGCTTCCACTCAACAATACCACACCAATGATGAAGGCCGAGCCGAACGGGATGTACGCCCTTCGGAACGGCGGCGGCGGGAACGATTTGCCTATTCCAGGCTCCTTCAAAGCCATCATGAGGCCTCACCTAGACCAAACCAATGACATTTCCTATCAGTGCACAATCTGCGATAAAGTGTACAACAACAAGACCGAGCTAAAGGATCACGAGCTAACGCACTCTGTAGATGGGGAATACACATGCAATGTGTGCTGGAAGAGATTCAGGTCCTTAATAGGACTGAAGATACACAAGAACAAGCACGCCAATGAGATGAAACAGCAAGCCATGACCGGGATTCCGATGAGGGTGAAAAAGGAGGAGAGTATGGTGAACGACATCAGGGAATCGGAACTGTTTATCGAGGAGTTTAACGGGGTGGACAAAGAACGCCCTTATGTCTGCCGAATTTGTAACAAGCGCTTTAAGACTAAACACGCCTTGCCCTATCACATGCTTCTTCATACCGGGGAAACTCCATTCACGTGCAACTTTTGCGGCAAAGGATTCAGGTCCCTCATTAGCCTCAAACTGCACACCAAGAAACACGAAGATGGTACTtggaaaatggaatttaacAACTACGATCAGCCTACAACGTCAGCTGCATCGAATGCCAATCCTTCATCTTATCCAGCATCCTTTGAGAATACAGACAATCTGACTATGAAATTGGATGCTGAACAGAATGAAGAGGAAGAAGACGAAGAGAATGACATTGAATCAGGACATGAAGATGAAAATGAGCCAAATATAAATGACTTTTGTGCAGTGGAAATGATGATGGAGCCCGAGATCACAATCAACGAAGACGAATCCGAGGAGAAACATCAATCTCCAATGAACATGGCTAGTGTGGCTAATGGACTGAATGGCCAATATAGCCACTTTATGAATGAAGACGATGAAATCCCGGATCACCATGAAGACAATGTCGAACAAGAGCACAGAAAACCTATAGAAAACTATCCTGATATTAAACCAGTATTAAACTCTAATTCAGATCTTAAATATGAATGTCCAATCTGTTTCAAGAGATTCAAAAACCGGCTCTCTCTGCCTTACCATTTGATGACCCATGAAAGGGGTGAACCCTTTGGATGTAACCATTGTAACAGGAAGTTTGTATCACAAATGAAACTAAAGAGACACATGAAGATGAAACATTTTATGGAGATGGGTAATGGTCAAGAAAATGGGGACATGAAAATGGAAGATAATGATTTCCAACCAGTTCCACTGAGAGTGGGGAAGTTTAAGTTCAACTGCAGTATATGTAATCGAAAGTTCAAGACCAAGTTCAGTCTGAGGATCCATCAGAAACACCATCATTTGTTTAAGTTTAAGAGGGGTCCTAAGAAGAACGACGAGAATGGTGAAAATGGAGAAGGTGTTCCCAATCAGGAAGGCGCAGATAAAGAGGGCAATAACTCggctgatgatgatgaggagGATGTTCTGTTCTGCAAAATCTGTAACAAGCACTTCACCACAATGGCAGGAAAGGAGTATCACATGATGATCCATAACAACATTAAGCCATACGAGTGCGATCAATGTGGAAAGAAGTTCCGAAGTTACAGCTACTTCAAAATCCACACCAAGTACCATTTGACGAACAGGGTGATAAGAAAGGGAAGGCCGAGAATGTTTGGTGACTTTAACATGAACAACAGTTATCAGTTGTCCAAGGAGTACGAGCATTTGAAGACCGAAGACGGCAGCTATGCGTGTAACATTTGCCAGAAGAAGTTCAAGTGTAGACAATCACTTCCGTATCACATGAATCTCCACAACAAGAACTCCATTTTCCGGTGCATGATCTGCAATTTAGGGTTCAGAAATTTGAGGCGACTGAAGAGCCATAACGCCACCCAGCACGGGGACAGAGATATCGATGAGATGCATCCAAATATTCCAATGAACGGCATGGATTTGCCTTTAAAGCAGGAGATGATTATAGAGGACGAGCTTCCAGACAGAGACCTAGGCGACCCTATGTCTGTCAACGATCCAATCCAGCTCAGTGATCACAGTTCCAATACTTCGATGACCCTGAATGTTGATCCTTTGCTGATTCCACAAGTACACATGGGAGGAATTCAGGTGAAAAAGGACCTGATGCCAGTTGTTCCTCCGCCTGTGGTGATGCCTCAAGAGGAGGAGGTCTCAAGGCCGTCTTTTGTCCCCGAGATGCAGCTGATCGAGTTGGAGTCCGGCGAAAAGGCCTACCTGTGCCTGTTGTGCAAGAAAATGTGTCGTAGCAAACAGGCGAGTGTTTACCACAGGATGATTCATACGGGAGAAAAGCCCTACAAATGCGAAATCTGCGACAAACGATGTAGGTCTCAAGCGAATTTAGAGTTGCACAAGAAGATGCATAAGAACGAACAGATGGCGACAGCAGCCGGTAATTCCTATGCTCCCATGCCTCCTGTACCCGGAGTTCCACCGCCAATGATCCGCAAAAGAAATCGCTTTCGGATCAACAGTAATAGCGCCAATATAATGCCCTTTGAGAACTTTCCCACGGATTCCCGCATGGACATGTCTATGAACAGATGGCGGGCTTTTGCTGACTTTAAGCGGATACGCTGTGTGGAGTGCAACTACAAGTTTAAGAGCGTTCAAGCTCTAACTTATCACTGTATGATTCACACGGGTGAAAAGCCGTATCAGTGCAAAATTTGCCGAAACTCCTTCCGATCCAAGACTAATTTGACTCTCCACGAGAGGTCTCACTTTCCCAAGAACGGGGAGGAGGTGTATGCGCCTTCTTTTAACCCAGATGAACTACAGGTCAACTATAATTTGCAGTTGGACATCCTAAACGGAGCTCCAGGATTAAGTCACCAAATGATGGATGATTCAATGCCACCGCAGCAAAAGTCCCCCGCCAATTGTTATTGCATCGTCTGCGAAAAGTCCTTCCGCACCGAGGGCTATGTGCGACATCATCAGCTCCTGACCCATCAAGTGCGATCCGATGTGAATGTGAACGAGTTGCCTACGATTGTTAACAGTGCCGATGGCTACATTTTCAAATGTGAACGGTGTGGCAACTGCTTTAGAACAAAGcagtattattattaccacCTGAATACTCATCACGGTGGCGAACAATTAGACTAG
Protein Sequence: MDKSGDSNSGDYDQQKMLLDYLAIMQNPNPNASSNNNMNNGGPGSSGGGGSSGRSSVTEMDPGPGMSNGMNNSSMHDLILAKQYLDQFSNVGMNGMSDFPNGNASSQGVSNNFGNMAMNPGSSASWMNQYPPPYLQLLNSHFHKEFMRQMNNVQKSQMEAVPPPLPPVTKEKPRLPQPCASDPKRYECEYCHKTFASRYYMSTHVATHCPAAPPSVTEPLKRITSPEQLRLLEKCQQKNQQMQQQNYSSKEGKFTCVKCGRWFYQEQEFKQHMMSHSGERPYNCNLCGKRYRYVGNLETHKCLGKINQDSTTLQIKTENGSMPSLNGRNMNGFYQNAPSSSKYFSTQQQQQESLQNDLKMMMMMENSIQSNGGGSQGMLSPAVASSLVNALSSDRDDTGTKLNCGLCFKSFVNEVELMHHLKTHKPADIDMMMMMMSAAASSMQNDDDEDDDSNNNKMGMNTRQGSKQDNFSQLNGLTDKFMNNGGELMCVVCNKSFKNLMLYYTHIKTHTEMFPQTFVCHICKESFNSEESLEIHKRKVHSKTIIDTPRYSCEEELQLNQQEENDLSTNFSEDWNFKCSTCAAKFREQQVFDYHLLLHKGERPHSCSICAKCFKSRLTLTVHENSHNQKIPPKLLPLNNTTPMMKAEPNGMYALRNGGGGNDLPIPGSFKAIMRPHLDQTNDISYQCTICDKVYNNKTELKDHELTHSVDGEYTCNVCWKRFRSLIGLKIHKNKHANEMKQQAMTGIPMRVKKEESMVNDIRESELFIEEFNGVDKERPYVCRICNKRFKTKHALPYHMLLHTGETPFTCNFCGKGFRSLISLKLHTKKHEDGTWKMEFNNYDQPTTSAASNANPSSYPASFENTDNLTMKLDAEQNEEEEDEENDIESGHEDENEPNINDFCAVEMMMEPEITINEDESEEKHQSPMNMASVANGLNGQYSHFMNEDDEIPDHHEDNVEQEHRKPIENYPDIKPVLNSNSDLKYECPICFKRFKNRLSLPYHLMTHERGEPFGCNHCNRKFVSQMKLKRHMKMKHFMEMGNGQENGDMKMEDNDFQPVPLRVGKFKFNCSICNRKFKTKFSLRIHQKHHHLFKFKRGPKKNDENGENGEGVPNQEGADKEGNNSADDDEEDVLFCKICNKHFTTMAGKEYHMMIHNNIKPYECDQCGKKFRSYSYFKIHTKYHLTNRVIRKGRPRMFGDFNMNNSYQLSKEYEHLKTEDGSYACNICQKKFKCRQSLPYHMNLHNKNSIFRCMICNLGFRNLRRLKSHNATQHGDRDIDEMHPNIPMNGMDLPLKQEMIIEDELPDRDLGDPMSVNDPIQLSDHSSNTSMTLNVDPLLIPQVHMGGIQVKKDLMPVVPPPVVMPQEEEVSRPSFVPEMQLIELESGEKAYLCLLCKKMCRSKQASVYHRMIHTGEKPYKCEICDKRCRSQANLELHKKMHKNEQMATAAGNSYAPMPPVPGVPPPMIRKRNRFRINSNSANIMPFENFPTDSRMDMSMNRWRAFADFKRIRCVECNYKFKSVQALTYHCMIHTGEKPYQCKICRNSFRSKTNLTLHERSHFPKNGEEVYAPSFNPDELQVNYNLQLDILNGAPGLSHQMMDDSMPPQQKSPANCYCIVCEKSFRTEGYVRHHQLLTHQVRSDVNVNELPTIVNSADGYIFKCERCGNCFRTKQYYYYHLNTHHGGEQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -