Calb007527.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001014945.1
- Location
- JXOV01006455.1:9214-11001[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-93 2e-89 299.2 15.8 2 217 25 222 24 223 0.92 2 2 0.16 3e+03 -2.1 0.2 84 104 369 389 350 426 0.50
Sequence Information
- Coding Sequence
- atgttTCCTTTTACAGCCCAGAAGAGCGCATTAAAGCGAAAGAGTGGGGAGCAGCTGGAGCCTGCGAAGCGGCCACGGCGGAGTGTTCGTTTCGAGAAGGTGACCGTGTTTTACTTTCCGCGGACTCAGGGCTTTGTTTGTGTGCCGTCGCAGGGCGGTTGCACGTTGGGCATGAGCTCGAATCACACGTACAAGAAGTCGATGTCGCTGAACGAGCACATTGCGGAGCAGAGGAAGGCGCATCGGCAGAATTTGGATCCGATCCGAAATTCGTCGAGCGAGGACACGGAGAGCGACGAGGAGCCGAGCGATGTGAGTGAGTCAGACCTGGACATGGAGTCGAGCGGGTTCCTGCAGCCGGTGTCGACGAAGCAGAGGCGGGCGCTGCTTAAGGCGGCCGGAATTCGGAAGATCGAGTCGTCGGAGAAGGACGAGTGCCGGACGATTCGAAGCTCGAGGGAGGTGTGCGGCTGCAACTGCCGCGGTTTCTGTGATCCGGAGACGTGTTCGTGTAGTCGGTCGGGGATTAAATGCCAGGTGGATCGGTTGAACTTCCCCTGTGGCTGCACGAGGGATGGATGCGCGAACGTCATTGGAAGGGTGGAATTTAATCCGATGCGGGTTCGGACGCACTTTATTCACACTATTATGAGGCTGGATTTGGAGGAGAAGCAGCTGGAGCATCAGGAGAGGCGGAAaatggaggaggaggaggatggATCAACGACTCAAAACTATATCACAGTAGTAGGAGGCCATGAACAAATGGTGGAATTAAAGGAAAGTAGTGTGACCAGCAGTCCTTATTTGTCAAATGGTGACGCTCACATTAGTCCCAACAACGATCCCGGCCAACTGAACGACTCTCTAGACTTTCACTATGCCTACCGGGACGAGTACAGTagttctaataataatttaaatactaatcttaataataatatcgaaTTAATGAAAAGTCCTAGTATTACGAATAATAACAGTTCAATAAATAGCCTCAACTCAccaagcagcagcagcaccaaCAGCCAACTATGTAACAGTATACTGAATATATTAGGCTTAAACACAAGTGCTTCGAGTAAGAGTCTCACAGAGGATGAGATCGTGTTGGAGGAGGAGGGGGAGATGGAGAATGAGACAGTTGTTGCCGAAGAGGAGGAAGGagataaatttgaagaagCTAACTTAAACGTGACCAAAAGAAAGTCGCTGCACGAAATGGATTCAAGCGACCTGCTCTATGCGCCAATGCTAGACTTTATGGTGGACCAAACAAGATTACAGGAACAAGCCCAAGTTATATCGTGTGATAAAGTGGTTCTAGACGGTGACAATTTGTCACAACTTAATGGTTATGTTAGTCTAAACAATGAGTCGTCCTCTACAATAGAGGGAGGGGGTGGAGGAGGGGGTGGAGGAGGGGACGGGGATCCTCGGCCCAAATCACCTACCGATCCAATTGCCTCACAATCACCAGGTCCTGTAACCAACTCAGAAACAATTCTCATTGAAAACGCGATCCAGCCTGATTAA
- Protein Sequence
- MFPFTAQKSALKRKSGEQLEPAKRPRRSVRFEKVTVFYFPRTQGFVCVPSQGGCTLGMSSNHTYKKSMSLNEHIAEQRKAHRQNLDPIRNSSSEDTESDEEPSDVSESDLDMESSGFLQPVSTKQRRALLKAAGIRKIESSEKDECRTIRSSREVCGCNCRGFCDPETCSCSRSGIKCQVDRLNFPCGCTRDGCANVIGRVEFNPMRVRTHFIHTIMRLDLEEKQLEHQERRKMEEEEDGSTTQNYITVVGGHEQMVELKESSVTSSPYLSNGDAHISPNNDPGQLNDSLDFHYAYRDEYSSSNNNLNTNLNNNIELMKSPSITNNNSSINSLNSPSSSSTNSQLCNSILNILGLNTSASSKSLTEDEIVLEEEGEMENETVVAEEEEGDKFEEANLNVTKRKSLHEMDSSDLLYAPMLDFMVDQTRLQEQAQVISCDKVVLDGDNLSQLNGYVSLNNESSSTIEGGGGGGGGGGDGDPRPKSPTDPIASQSPGPVTNSETILIENAIQPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -