Basic Information

Gene Symbol
TRERF1
Assembly
GCA_001014945.1
Location
JXOV01006098.1:6135-28040[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-08 2.2e-05 24.5 0.7 2 45 1192 1235 1191 1236 0.94

Sequence Information

Coding Sequence
ATGCTTGTGGAGCTGATGACAAACAATGGGATCGCAATTACAGTATGCAGCAAGGTGTTTGGGAATGCATCGGCGTTGGCGAAGCACAAATTGACGCACAGCGACGAGAGGAAGTACATTTGCGGAATGTGTTCGAAGGCGTTTAAAAGACAGGACCATTTGAATGGTCACATGCTGACACATAGGAACAAGAAGCCGTTCGAGTGCAAGGCGGAGGGCTGCGGCAAGTCGTACTGCGACGCCAGATCGCTGCGGAGGCATACGGAGAACCATCACAGTTCATTAGCGATGACACCCACAACCCCCAATCAATCAATGTCGTCGTCGACGGGACCTCCGACGGGGCTCAGTTTATCGCCGGCCACAGCGAGCGGTGATGCGAGCTCACCGCATGGCGCCACTTGTATCATCCCGAGTGGAGCGGACGGATCCAGCCCGAAATCGGAATCGCCCAACTCTCCAGCGGCGACCACAGCCTCTCCCTCCTCCAGTAGCAGTAACAGCAGTGCCAGTAATTCATCTCCAGCATCGtcgtcctcctcctcctcttcatcGTCGTCGTCCAACGGGAATGAGGGACTCACCCGACAACAATTGGATCTCATTAGCCAAATCATGCAGCAAACGAAACAAGCCAACGCTTCAGCTGTGGCCAGCCAGAAGCAAGTCGTCTCTCAGCAGAGGCCGAGAACGTGGAACATGCAGACACAATTGCAGCAGAGTTCGGGTCAACAGCAGCCGCACCAGCAGCAAGTGAAAATGTCACCAGCTGGCGAAGTGTCTATTAGTACAATTACTTTGAACGGGATCGCAACATTGTCCTCCACCTCGTCGTCAGCGCTACAATCTTCCACGCCAGCCACAGTCACCGCCATCACGACCACGTCGTCGACGACGGCAGCAGCAGCGAACGGCCTGAACTTTGCCAAAATGGAACAGAAGCCGGTCGAGTGCAATCTGTGCCACagaaagttcaaaaatataccCGCTCTGAATGGACACATGCGATTGCACGGCGGCTATTTCAAGAAGGACGCCGAGACGAAAAAGTTCGATAAGAAAGACCCACCTGGACCACCGCTCCAGACAGCCAGCATCGGCGTCAGGGCACTGATCGAGGAGAAAATCATCAGTAAACGTGGAAAAGATTTAAAGGGTGCCTTTGCTGTGCCTGCGCCTCCCCTAGCAACAACACGTCGATCTCCAGACTCTGAACCCTTTTTTACACCGAAGCTGACCGCTGCTTCCAGTCAAGAGACGAGTGGATCAGCGCCAACAATGCCGAGTGTCAATAGTCCGACAAAGggccagcagcagcaacaaccaCAATCTCCAACAGTCCAACCGCAGCTCCCGTCGACCATCCATCTGTCCGTGACGACGACGGCCATCAACAGCGGAACCACAATCCTGTCGTCCACGTCATCAGGAAGCGGAGGGGTGACACACCACCTGAGCAAGGCCATCAGCCAGATCTCGTCCCCGGTAACGGTTAATTCCAGCACAGCTTCTGGTAATTCGATTATCCTGAGCGACAATAAGGACGCCACATTGATCGAGCTGCTGAAGAGGGGCACAAAGGTGGCCGTGAAAAGAGCGTGCTCCGACCCAGGTCAATTAGTGCTCTCCACGGCGACAACCACAAGCTCAAACACCGTTCACCAGCAGACTTTGGACGACCTTCTAGGGAACAATAAATCCCACCTAAACAGCGCTCTTTCTAACGACAGAAACACAGTTGGAAAGGGAGCGGAAATTAGAGACCTGACACCGTCCGTAAAATCCGAAAACCCACCATCATCTACATCGTCACTGTCTCTAACTAATGGGACGCAATCTGTCGACTCGAATTCACCGCCATCGTTAGCCTTAACTATCGCCCAAACGCCGAGCAACTCGGACGTGTTCACTCTGGCCTACACCACGGACTCCTCGTCGCCTTACTTTGGAGAGAACGAGGTGTACAGCGTCAACGACACCGCCATGCTGCTGCAGGCCGTTGACTCCATCCAACTGCTCCACGAGTCCAGCAGCAATGTCGATCAGCTGGACGATATTGGCTCTTTAAGCGACTACGGTTTAGACTCTGACACCGATCACCTAAACCTGTCCAGCTTCACCACTTCGTCAAGACAGCTACAGGCCGTTCTGAACTCCCCACTACCCGAGAGTCTGGCCGAGTTCAGTGCTCTTCATTCCAAGGATTACATCTTGTACAACTGCAAGAGTAATTCCCCAGCCTCCCATAATCATCAGTCCGTCACTTCGCCCCTTCCATCGCCCCTAGCGTACCCCACACCACCAGCAAGTCACGAAGCTGTGGCGCAGTCGTCCCCCTTCCTCGACGACACCCATCAATCATCGGATAATAGCCCCTTCTTTGGGGATGAGAAGAAGAACTATCTGGAATCGAAACTGAGTTTGAATAAGGATGACAGGATATTACAGCTGAAGAATGAACTTTTCAATGACAGTAAGTCAGTTATGGAGGATAACGATGATCATTTTTATAAGGACGACAATGAAACTGAGAACAGGTTACAAGATCTGGCCTTCCTTGACGAACCTCAATCGTTTCTGGATGATGCTAGAAACGCTTCTTCTCCTCTTTCGGCAGCTCTGTTCTCGTCAACAATGTCGAGTGCTGAAGAGGTGAAAGAAGCCTTACAGGAAGTCCTGCCTAATGAACATATTGGTGACGAAACTCCTTCAGAAGCGGACATTGATTTGTACTATCTTCCCAACCTCCAATCTCAGATGATGTCCAACTCAGATGATCCCTTGTTATCCTCCTCTCCAAAAGACTTTGCCAGTAAGCAACTCTCTCCGATTCTAATCAACCAGAAGTTTGATTTTGGAGTTTTCAACCCTCCGAGCAACAAACGAATAAAAACAGATCCCGATGTTCAGACGAAGGTCTCTTTACCTCTGACGGTACAGACGGAACCCATTCAGCAGCCAAAAGACAGTGAGGTTTTTCTCAGCCCTAGCAGTATTTCATCGACGTCCACGGCGACCCATTCGCCGCGGACAGCCACTTCCAATCCCACAACGCGCAAAAGACAGCATTCTGATGTAATTCCAAGGGCTTACGAACTGTACAAGTCGAGACTGAAACGACCATCATCGCACTTTACCCCCGCGCCGATTCTAAATCCCACGCGGAGCACCACCACTGGCATTTATAATGACTTGATGATTGCTTATGGAAATGAGCTGAGGAGCAGCGATGGAGAAACGGCGGCGGACGTGGTGGGGGATTTGTTTGGCGAGGTGAGCCAGAAACCTAGGATCAACATTGGTCCAGGATACCAGGCGGCGATTCCCAAGTGTAATTCACCAGCTGAGGCGAACCTGCTGAACCGAAATCCAGACGCATTAATGTGGAGTCCCGATGTTGCAACCGATGTTAGAGAGCTGCAAAGATTTGTGGGCCTGTCCAAGTCGTCCGCTGTCCCCATGGGAGGGGGAAACAGCTCAGAGGAGACGGCCCTTAAAGTCCTGCTCGACTGCAACGGCGAAATTCATACAGCGGTCCTGGAATTGCTGCAGGCTCCGCCCACCAACATTCACAAGCACTGGTCTTCGCAGGAAATCAACCTGTTCCTACGGGGATTAGAGAAATGGCGGAAAGCGTTCCATAAAATAAGTACCGAGattccaaataaaacaactgCGGATTGTGTTCAGCTGTACTATTTCTGGAAAAAGTTGTGTTCCGACTATAAATCAACGCATTTGCAGCAGCCAATTTGGTCTGCCGAGGATCCATCCTGTCCCCGGTTCCCCACCTCCTCGATGACGCCCAGCAACAACATTAGCAACTGTCTTCCTCTAGCTGCTCTTTCATCCCCTTCAGGAGGAATAGCATTAACCACCACGACGTCCACCTCTGGTCCTTCAGCTTCTCTTGCCTCCACCTCATCGTCAGCATCATCTTTATCGACTACTTCTCCTTCCTCCTCGTCGTCATCATCGTCATCTTCAACCCTCTCCCACCAGGACATCAGACCCCACATTTGCGAGATGCCCGACTGCTCAGcgAGCTTTTCGAGTAAGGCTGCCCTGCATGGCCATACCAAGTTACACTGCATGGGTCGAAGTTTGTCAAGTTTATCAAGTGCCAATTCATCTAGTCACATTAACAGTGCCGCCAGCTTTGGCAATCACGGTAATCCACTACAATCCAAAGACGATTTTCCCTGCAAGGTGTGCGGCAAGATTTTCAACAAGGTGAAGAGCCGGAGTGCGCATATGAAATCCCATCGGCCTCAGGACTCCGATTCGAGCACCACCTAA
Protein Sequence
MLVELMTNNGIAITVCSKVFGNASALAKHKLTHSDERKYICGMCSKAFKRQDHLNGHMLTHRNKKPFECKAEGCGKSYCDARSLRRHTENHHSSLAMTPTTPNQSMSSSTGPPTGLSLSPATASGDASSPHGATCIIPSGADGSSPKSESPNSPAATTASPSSSSSNSSASNSSPASSSSSSSSSSSSNGNEGLTRQQLDLISQIMQQTKQANASAVASQKQVVSQQRPRTWNMQTQLQQSSGQQQPHQQQVKMSPAGEVSISTITLNGIATLSSTSSSALQSSTPATVTAITTTSSTTAAAANGLNFAKMEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAETKKFDKKDPPGPPLQTASIGVRALIEEKIISKRGKDLKGAFAVPAPPLATTRRSPDSEPFFTPKLTAASSQETSGSAPTMPSVNSPTKGQQQQQPQSPTVQPQLPSTIHLSVTTTAINSGTTILSSTSSGSGGVTHHLSKAISQISSPVTVNSSTASGNSIILSDNKDATLIELLKRGTKVAVKRACSDPGQLVLSTATTTSSNTVHQQTLDDLLGNNKSHLNSALSNDRNTVGKGAEIRDLTPSVKSENPPSSTSSLSLTNGTQSVDSNSPPSLALTIAQTPSNSDVFTLAYTTDSSSPYFGENEVYSVNDTAMLLQAVDSIQLLHESSSNVDQLDDIGSLSDYGLDSDTDHLNLSSFTTSSRQLQAVLNSPLPESLAEFSALHSKDYILYNCKSNSPASHNHQSVTSPLPSPLAYPTPPASHEAVAQSSPFLDDTHQSSDNSPFFGDEKKNYLESKLSLNKDDRILQLKNELFNDSKSVMEDNDDHFYKDDNETENRLQDLAFLDEPQSFLDDARNASSPLSAALFSSTMSSAEEVKEALQEVLPNEHIGDETPSEADIDLYYLPNLQSQMMSNSDDPLLSSSPKDFASKQLSPILINQKFDFGVFNPPSNKRIKTDPDVQTKVSLPLTVQTEPIQQPKDSEVFLSPSSISSTSTATHSPRTATSNPTTRKRQHSDVIPRAYELYKSRLKRPSSHFTPAPILNPTRSTTTGIYNDLMIAYGNELRSSDGETAADVVGDLFGEVSQKPRINIGPGYQAAIPKCNSPAEANLLNRNPDALMWSPDVATDVRELQRFVGLSKSSAVPMGGGNSSEETALKVLLDCNGEIHTAVLELLQAPPTNIHKHWSSQEINLFLRGLEKWRKAFHKISTEIPNKTTADCVQLYYFWKKLCSDYKSTHLQQPIWSAEDPSCPRFPTSSMTPSNNISNCLPLAALSSPSGGIALTTTTSTSGPSASLASTSSSASSLSTTSPSSSSSSSSSSTLSHQDIRPHICEMPDCSASFSSKAALHGHTKLHCMGRSLSSLSSANSSSHINSAASFGNHGNPLQSKDDFPCKVCGKIFNKVKSRSAHMKSHRPQDSDSSTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00345354;
90% Identity
iTF_00345354;
80% Identity
iTF_00345354;