Calb009690.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- cdc5l
- Assembly
- GCA_001014945.1
- Location
- JXOV01042719.1:401-1340[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-18 5.4e-15 55.3 1.8 2 46 9 54 8 54 0.97 2 2 5.6e-13 6.4e-10 39.0 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGTATTATGATAAAAGGAGGTGTGTGGCGCAACACAGAAGATGAAATTTTGAAGGCGGCTGTAATGAAATATGGCAAAAACCAGTGGTCTCGTATCGCGTCTCTGCTCCATCGAAAGTCCGCGAAGCAGTGTAAAGCCCGTTGGTATGAGTGGCTGGATCCCGGTATCAAGAAAACGGAGTGGTCGAGGGAAGAGGACGAGAAACTGTTGCACTTGGCCAAACTGATGCCCACTCAGTGGCGAACTATTGCGCCGATTATTGGCAGGACAGCCGCTCAGTGCTTGGAGcgatatgaatatttattGGATCAAGCTCAGAAGAAGGAAGATGGTGAAGATGCCGGTGATGATCCTAGGAAACTTAAACCTGGCGAAATTGACCCAAATCCGGAAACCAAACCGGCTCGACCGGATCCAAAGGACATGGATGAAGACGAATTGGAAATGCTGTCCGAAGCAAGAGCTCGTTTGGCTAATACCCAGGGTAAGAAGGCGAAACGAAAGGCTAGGGAAAAGCAATTGGAAGAGGCCAGGCGGCTTGCTGCTCTTCAGAAACGAAGGGAATTAAGGGCAGCAGGAATTGGTGGAGGAAATTAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPGIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEDGEDAGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGGGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -