Calb009222.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- SNAPC4
- Assembly
- GCA_001014945.1
- Location
- JXOV01002395.1:1996-4007[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.71 8.2e+02 0.3 0.2 22 46 200 225 199 225 0.86 2 5 5.8e-12 6.7e-09 35.8 0.0 1 44 231 275 231 277 0.95 3 5 2e-09 2.3e-06 27.7 0.0 1 42 286 331 286 333 0.95 4 5 1.8e-15 2.1e-12 47.0 0.0 1 46 341 386 341 386 0.97 5 5 3e-08 3.5e-05 23.9 0.2 3 45 393 435 391 436 0.91
Sequence Information
- Coding Sequence
- ATGAGGAATGAGGAGGATTTTGACTATGAGGAGCAGCAGGACCAACTGGCTGGGGACGTTTTGGAAGTGGACGAATTGGAAAACGTAAAAACCATCATTTTAGAAAACCAAACAATCAATGTAAAAAACTGTTTACGCCTCAACAAGGCGTACAGTGAGGAGCTGAAGAAGCTCAAGTTTAAATTGGAATCAATCCTAGACGAATGTGAAAAGAAATACGAAGAAAATGAGGctcttttaatgaatttaaacacTTCTACTTCAAAAGAAGGCTCTTCTGCCAGCTTTACTCCTCGGATTACAAAGGCTACTCCTGGGTATCCCTATTTTAAGACAGATTTTGGTGCTGTTCCCCCACCGAACAAGGAAGCTTTATACAGGAAAACCAACAAAGAACTATATCCAATGGATTATAGAGGAATTCAAAGATACCGGTGGATTTTATCGGACAAATCCCTGTTAGTGAAGACAGTTAAGGAGCAAATGATCAAGTATTTATCAGTCTCTGCCAGACACGATCCAAAGGAGACttctaaaattgttaaaaggtCTTTAAAACGACTTTGTCAGGACGTTTCTTCCTCAACTTTTACGATTAATTGGGGACAAGTTTGTGATGCTCTCTTCAATAGACACAATTCAAATGAATGCTTGACCATGTGGAATCAGTATTTGCACCCGGATTTGAAGAAAAAGTCCTGGACAGAGGAGGAGAATCGAAAATTAGTTGACAGTGTGAGTAAATATAAGTGCCAAAATTGGCCTTTAATCGCTAAAGCTATTCCAAATCGATCTCCTTTCCAATGCTTTGTCTATTATCAATCCTCCTTCAATGATTTACACAATTATCAACAAAGGAATAAGTTTTCTTTAGAGGAAGACAAAAAATTGTTAGAACTAATTGAGAAACATAGATTTGGATCTGTTATTCCTTGGACTAAAATCCAAATGGAGTTTGGAAGTCGGACAAAAACAGCCTTATATTACCGTTATGAGTTCTCATTAAAATCTACAATAAATAAGGAGCCTTTTAGCATGGAAGAGGATATCATTTTCATGGCTGCCATTCAACAATATGGAGTAAATTTTAAGCGAATTGCTGCCGAATTTCCCAACAGAACCATGGTTCAAATCAGACAGCATTACAATAACGTCCTAAAAACCGAGAATAACGTGAAATGGAATTATGACGACGACATgaaattgatcaattattaCGAGCATGACAGATTAACCTGGGCTGAAATCGCCAAAATCCTAACAGGGCATTCCAGAACCTCGTGCCGAACTCGGTATCAAACAATCAAGAACTTCCTGGCCAAAAATCCCAACAAAACCCTTAAAGATGTCGGTAACAGAGATAAGAAATCGAAAAATGGGGTAACAAAAAGCAATTGGGTCGAGAAAGTGAATGAGATTGGAGACAAAGTCAACGAAAAGAAtctcaaaaataaaaaggactTCACCCCTAACAATAAgatgattgaatttttaaggatGGCCAAGCACCTAGATATCAAATTCAGTTCGAAAGATATGACTTTAACCAGGAAAGCTTTCGATGAATCggaagttatttttattaaaaatgcccGTTTATTACAAAAGCAAAAATTTGAACTAGAGGGAGAAATTAATCCTTCCGAGGAGATTTCTcaagttttaaacaaaattctatCTCTCCAAGGCAGATTAACTGAGaataaaagaaagagaaaGTCACCATATACAGATGAAGGAAGtgtcgatttatttaaaaagcgaatgaaactaatttttgGCCCTTCCATAGAAGCTCtaagaaatgaaaatgaatctGATATTtag
- Protein Sequence
- MRNEEDFDYEEQQDQLAGDVLEVDELENVKTIILENQTINVKNCLRLNKAYSEELKKLKFKLESILDECEKKYEENEALLMNLNTSTSKEGSSASFTPRITKATPGYPYFKTDFGAVPPPNKEALYRKTNKELYPMDYRGIQRYRWILSDKSLLVKTVKEQMIKYLSVSARHDPKETSKIVKRSLKRLCQDVSSSTFTINWGQVCDALFNRHNSNECLTMWNQYLHPDLKKKSWTEEENRKLVDSVSKYKCQNWPLIAKAIPNRSPFQCFVYYQSSFNDLHNYQQRNKFSLEEDKKLLELIEKHRFGSVIPWTKIQMEFGSRTKTALYYRYEFSLKSTINKEPFSMEEDIIFMAAIQQYGVNFKRIAAEFPNRTMVQIRQHYNNVLKTENNVKWNYDDDMKLINYYEHDRLTWAEIAKILTGHSRTSCRTRYQTIKNFLAKNPNKTLKDVGNRDKKSKNGVTKSNWVEKVNEIGDKVNEKNLKNKKDFTPNNKMIEFLRMAKHLDIKFSSKDMTLTRKAFDESEVIFIKNARLLQKQKFELEGEINPSEEISQVLNKILSLQGRLTENKRKRKSPYTDEGSVDLFKKRMKLIFGPSIEALRNENESDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -