Basic Information

Insect: Clogmia albipunctata
Gene Symbol: Mblk-1
Assembly: GCA_001014945.1
Location: JXOV01018611.1:24456-30268[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.6e-17 6.8e-14 51.4 0.0 1 45 331 376 331 376 0.96

2 2 7.3e-19 1.9e-15 56.3 0.0 1 43 739 782 739 784 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.6e-17	6.8e-14	51.4	0.0	1	45	331	376	331	376	0.96
2	2	7.3e-19	1.9e-15	56.3	0.0	1	43	739	782	739	784	0.95

Sequence Information

Coding Sequence: ATGGGACGCAGGAAATGGAAACTGTATCAAGACGTTCTTACCAGCTCTACACATCACCAGCCTCATTATCAACAGTcacaacagcaacaacaattaTCGCCGACAGATCATCATCAGGCCAATACAGCATCAGCAACAGCTGCACAACCAGATACAAATTTAGCGGTAAACAATATTTCAACAGCAGTGGACTTGGATTGCGTTCCCACTGCGAAAAACAACGGCCAACTTTTGGGCCACTTGAAAGGCAATCTGGACAAGGTCGGTGCTTTGTCCGATAAAGAGGAAGCTCAGCCTCCTGCTGCCCATTGCATAAAGATAGATAAGGaaattaaaatagaaaacgaGGCCATAGAGTCACCTCCTTCTGCTAAAGAggacaatttaaagaaaaacggGGAGGAGAACCCTAATtctcataatttaaatcatcctGTCGATTGGAAGCCACAGGACAAGTGTTATTTCTGTGTCGACGGCAAACTGTTAGCGGTGAACGATCGCGGGGAACTTGTGCCGGAGTCGGGCTCGGGTAATACCGAGCCAGAACTCTTAACCACGACTCCAATCGATTCTGATAGCGATTCTAGTGAGTCAGAAATCGGAAATCCCAATTTGCCTAACGCCACATCGCGGGCAGTGAAGGAACTGCTCCGGAATCCGAATATGACTTCACTAGAATCGGTAATGGCGCAGTATGCGGCAGTTGCATCTATGCACGGACTCCCAGCTATGCCGGGACTGGCTCCATTCTATCCTGGACTTTGGTACTCTCCATTTACTCAAAATTTGCAAGATAATGCcgagtcgtcgtcgtcgactAACCAGAAACAGTCGACCAACAGCGACAATGCGTCTCCAGTGCCCAATGCAGAGCAACCCTTGGACCTGAGTGCCAAGTCTTCATCGTCTTCGTCATCTTCGTTAGATCAGAAGAACATTTTTAAgGCCAAGCCGAGGATGACTGCAATCTCGGGGAGAAGAACATACACGGAAGATGAGCTTCAGAATGCGCTGCAGGACATTCTCAGCGGCAAACTAGGCACAAGACGGGCGGCAGTGCTCTACGGAATTCCTAGATCGACTCTACGGAATAAAGTCTACAAATTGGCCATGGAACAAAAAAGAGAGGCAAATATTAATCCTATTTTGGTGGCACCGGTTCTGAACGATCTCGACGAGGATGATAAGGAGTCCGGAGCCGAGGATGAGAAGGAGCTCGAGAAAACCCTTCACGGTCTTCCTTCCGAAGATATACTCAGAATAACTGCCACTCAGAGCCTTGCCCTTCAAAACATCGGCAAATACTACCAGAATCACAATCAAGATGGACCATCAGACATGGCGACGCCCCCTCCGAAACAATCACCCATTCCATCAAAATCTCAAACGCCTACACTGCAGAACCCTCTACTTGATCCCAATATGTTTAGTCTACTATTGAGTGGAAGTTTGGGTGCTTTGAGTGGATTAGGTGCAAAGTCAGATGAGACGCCTCCAGCTGCGGCAATGGCGGAACTATTCCGGAATTTTCTGTTACAACACGAGCTTCTTAAGAGCTCTGAAGTAGGAAGAGTAGTAAAGTCGGAAACACCTGAAACTGCGTCTCTGGAAAGTACTGGACGCAGTGGAAGCGATGTTAATGATACCAATGACGATCCTTCTGTGATACTGAAAATTCCGTCCTTTAAGCCGATCGTGGGCCCTTCAGGAGTTTCTTTGCCTGGAGCGCCATCGTCCCTTTCGACTGCtatcaacaacaacaagaacGGAGACACAGCCCCGAATTCTCAGCCAACAGCCACCACACCTGTTCTCTCGAGGAGTCCTCATCAGTCACAACAGCACAGCTTATTGGGAATGCCTTCGCCAAATTTGCACCCAAGCAGCGACTCCCAATCGCCACCCATTCCCAACCTAGGTAAAGTGTCAATACGCGACGTTATTGCCCAGAGTATTAGTAAGAATTTCCAGCCAAATTTAATGGAGCCGGTGAAAAAGAAACATCCGCAACCAGAGAGTGGTCCTAGTATGCTGGACTACTATAAGACGTATCCCAGTATATCGGTGAAGAAGGACCTGGGAGCGGAAATGAATCGATTTGGAAGTGGATCCAGTTTGCTGGGGGGTAGTTCGGTCATGAACGCCTCTCTAAATAACACAGGAACGGGTGGCAAGGGGACAAGGCCAAAGCGGGGCAAATACCGCAACTATGACCGAGACAGTCTGGTTGAAGCGGTCAGGGCAGTGCAGAGGGGAGAAATGTCAGTGCACCGCGCGGGAAGTTACTACGGAGTGCCTCATTCCACGCTCGAGTATAAGGTGAAAGAGCGCCACTTAATGCGTCCTCGGAAGCGAGAACCAAAACCTCAGCCGGTGGACGATCGGGGTACCAACTCTAGTTCAAGCCCAGTAACAAATACCAAATCTTCAGACATTCCAAGTTCGTCAAATGCCGTGCGAAGTGCCCTTGACAAGGGCAAACTAGTGTCCCCGGCGTCGGCGAAACCCCCACTCAAAACGCCCCCCTTCTCATCAACGTCGTCGCCTAACGGGATGAAAATGCCGTTTGTAGATCCCGCTATGGCAGCACAATTGCAGTACAGCCCGCATTTATTTTGGCCTCATCCGCCGAACTTTAGTGGGATGCCTATGGATTTTGCCCGCACCTCTGGCTCGTCTTCTTCAACCACATTCCCACCGAACACTCCAGACACATTTTTTGCGTCACAGATGATGCAAAGGTTCCAGGAGGAGGGCGCTCATCGGAAGACAAATTCCACCAACTCAACGTCGTCACACAATTCGAATAGTATGGCAAAGCTGGCGGGCAATAGTATAAACAATTCGGGGAAGCCAGGCCAGCAACTATCCAATTCATTTGTGCCCAAAAGTGCTCGAGAATTAGCTGAAAGTCTGTACGATGGAACAAATGTAAATGGTTCCTTTCTCGACGGAATCATACGCCATAGTCTGGATCGAAAACCTGGAGATATTCCGCAAGGTGCTTTGCTGGACCAGCTGGTCAAGAGCAATCTACCGCTGTCGAGTAAACTTCTAGGAGATGAGGGAAGTAAGACATCCATGTTAGGAAGTGTGGGTAGTTTAAAACGTGGAGCTAGCCCGATGAATTTTCCGACTGAGATTAAGCGAGAACGGGACAGTCCACCCTCAGAGCCAAGTTTGGTAGCGCAGCCGGTTTTGGGCCTTAATAGTCGAAAGAGGGGTTCCGAAGGAAATGATAATGGACCTTTAGTGGACAGTCTACTTAAGCTACGGGAAGGACTTCAGGAGCGACCAACGGAAGACTTCAATGGCAGTAACAACAAAGAGGTCGACCAGAAGCCGAAGAATCTGCTCATGGCGTCCGACAACGATAACGAGGACAGTTCATAA
Protein Sequence: MGRRKWKLYQDVLTSSTHHQPHYQQSQQQQQLSPTDHHQANTASATAAQPDTNLAVNNISTAVDLDCVPTAKNNGQLLGHLKGNLDKVGALSDKEEAQPPAAHCIKIDKEIKIENEAIESPPSAKEDNLKKNGEENPNSHNLNHPVDWKPQDKCYFCVDGKLLAVNDRGELVPESGSGNTEPELLTTTPIDSDSDSSESEIGNPNLPNATSRAVKELLRNPNMTSLESVMAQYAAVASMHGLPAMPGLAPFYPGLWYSPFTQNLQDNAESSSSTNQKQSTNSDNASPVPNAEQPLDLSAKSSSSSSSSLDQKNIFKAKPRMTAISGRRTYTEDELQNALQDILSGKLGTRRAAVLYGIPRSTLRNKVYKLAMEQKREANINPILVAPVLNDLDEDDKESGAEDEKELEKTLHGLPSEDILRITATQSLALQNIGKYYQNHNQDGPSDMATPPPKQSPIPSKSQTPTLQNPLLDPNMFSLLLSGSLGALSGLGAKSDETPPAAAMAELFRNFLLQHELLKSSEVGRVVKSETPETASLESTGRSGSDVNDTNDDPSVILKIPSFKPIVGPSGVSLPGAPSSLSTAINNNKNGDTAPNSQPTATTPVLSRSPHQSQQHSLLGMPSPNLHPSSDSQSPPIPNLGKVSIRDVIAQSISKNFQPNLMEPVKKKHPQPESGPSMLDYYKTYPSISVKKDLGAEMNRFGSGSSLLGGSSVMNASLNNTGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPVDDRGTNSSSSPVTNTKSSDIPSSSNAVRSALDKGKLVSPASAKPPLKTPPFSSTSSPNGMKMPFVDPAMAAQLQYSPHLFWPHPPNFSGMPMDFARTSGSSSSTTFPPNTPDTFFASQMMQRFQEEGAHRKTNSTNSTSSHNSNSMAKLAGNSINNSGKPGQQLSNSFVPKSARELAESLYDGTNVNGSFLDGIIRHSLDRKPGDIPQGALLDQLVKSNLPLSSKLLGDEGSKTSMLGSVGSLKRGASPMNFPTEIKRERDSPPSEPSLVAQPVLGLNSRKRGSEGNDNGPLVDSLLKLREGLQERPTEDFNGSNNKEVDQKPKNLLMASDNDNEDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -