Calb012939.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- kn
- Assembly
- GCA_001014945.1
- Location
- JXOV01003942.1:1034-9822[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-106 7.9e-102 341.5 0.0 229 385 1 185 1 189 0.99 2 2 1.8e-06 0.017 13.5 22.6 421 520 188 306 184 319 0.59
Sequence Information
- Coding Sequence
- ATGTTTGTCCACAACAACTCGAAGCACGGGCGGAGGGCGAAGAGGCTGGACGTTTCCGAAGGTACTGGCAATTCCCCATTGAGTATATCGGGCCACCCTCTCGCTCCAGACAGTACGTACGACGGTCTGTACCCACCGCTACCTGTTGCGACGCCGTGCATCAAGGCGATTTCCCCGAGCGAGGGCTGGACGACGGGCGGCGCTCAGGTCATCATCGTGGGCGACAACTTCTTCGACGGGCTTCAGGTCGTCTTCGGGACGATGCTGGTCTGGTCGGAGCTCATCACTTCGCACGCGATCCGTGTCCAAACGCCACCCAGACACATCCCGGGCGTCGTCGAAGTCACCCTCAGCTACAAGAGCAAACAGTTCTGCAAGGGCTCCCCCGGACGATTTGTCTATGTTTCATTAAGCGAACCCACCATTGACTACGGATTCCAGAGGCTCCAAAAGCTGATCCCCCGGCATCCAGGCGATCCAGAGAAACTAcccaaagaaattatattgaaacgAGCAGCAGATCTTGCAGAAGCGCTTTACTCAATGCCCAGAAGCTCTCCTAGCAGTGCCACAGGATTCAATTCGTACACTGGACAGCTGGCAGTCTCGGTTCAGGACGGAGTAACTGGAACAACGGGTGCACAGTGGACAGAAgATGACTACCAGAGGGGGACAAGCAGCAGTGTGAGTCCTCGCGGGGGCTACTGTAGCAGTGCCTCGACCCCACATTCCTCGAATGGGGGCTCCTACGGTGCTTCAAACACAAACAACTCGACGCAGAACAACGCCTCGGTGAACGGGTACCACACGGCCAACATGGGCACCATCCCGTCCTCGCCAGCCAGTGTCTTCAACTCCACATCCAGTAGTGCATTTGAGCCAATTGTGACGTACTCCTCCTCGTCGTCCTCCTCGACGAATCCCTGGCATCAAACCTTTGTTCCTGTGCATTCTCACCACCACCATCACCACCATGGCCCCCACCAGAGCTGGCACAGTCCGACCACACAAAACAGCTCGGCCGAGGTCATTTAG
- Protein Sequence
- MFVHNNSKHGRRAKRLDVSEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSSPSSATGFNSYTGQLAVSVQDGVTGTTGAQWTEDDYQRGTSSSVSPRGGYCSSASTPHSSNGGSYGASNTNNSTQNNASVNGYHTANMGTIPSSPASVFNSTSSSAFEPIVTYSSSSSSSTNPWHQTFVPVHSHHHHHHHGPHQSWHSPTTQNSSAEVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_00344845;
- 80% Identity
- iTF_00344845;