Calb007392.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- -
- Assembly
- GCA_001014945.1
- Location
- JXOV01002858.1:666-2769[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0006 1.8 9.0 0.1 48 83 36 70 5 71 0.71 2 4 0.007 21 5.6 0.0 24 82 107 166 89 168 0.60 3 4 0.0086 26 5.3 0.1 47 83 232 267 189 268 0.78 4 4 0.068 2.1e+02 2.4 0.0 43 81 385 422 359 425 0.72
Sequence Information
- Coding Sequence
- ATGAGTGTTAAAGCAGTTGAATGGGTTCCTGCATTGACCCTGACATTGATCGATTTATATAAGACAAAGGACTGTTTCCGGCGACAGTCAAAGGactacttttttaaaactaaaaggGAAGTAGCCTGGAAAGAGATCAGTGAAGTTATGGGTATTTCTACGGAGCAACTGAAATTAAGGATGTCGAGCTTAAAACAGcattattcaaaagaaaaaaaggcaATTGAAAGTCAGCGTAAAACAGAATCAACATGGTACGCTTTCAACAGTTTACAATTCTTGGATGAAGTTAAAGAGgTGGAAACAAACCAGTGGGATCCTTCGTTGTCTTTGAAATTAATCGATTTATACAAGGGAAATGAATGCCTGTGGCGACCGTCGCAACAGCGTGATATAAAAGAGAAGAAAGCTGCTGCCTGGAATGAAATAAGCAGAGTCCTTAATATTCCAGCAAAGGAATTGAAATCAGAAGTTTTgagtcttaaaaaattatattttgaagaaaaacaagaaattcaAAGTAAACGAAAAACAGAATCAACATGGTTCGCATTCGATAGTCTATCCTTTCTGGATGAAATCCATAAGAAAAcgTTATCTGCTCGGATTGATGTTGACTGGAATTCCCTGCTATCCctgaaatttatcaatttgtaCAAGGAAAGGAAATGCTTATGGCATCCGGATATGAGAAATCAATTGAAACAAACAGAAGCATGGAAcgaaataagtaaaattatgGGTATTTCTGTTGAACAACTGAAAATCAAAATGTCTagtattaaaaacttatattcAAAAGAGAAAATGGCAATTCAAAATAActccaaaaaatcaaaatggtaTGCTTTTGACAGCCTTTCGTTCTTGGAATCAGAAGAAGCAAACCCAAGCACTTGTAAAATACTTATAAAAGGAGGCAATTCGAATGATGTTGaggaaaatttaatcaaggaGGAATATCCGGAAATTCCCGTAGTAATTGTTAAAGAAGATCACTGTCTAGATGTTTCCTCTCGCATTGAACAGAATTTAGACACAAAATATACTTCcccaaagaaatatttaaacaaattattgtctgTTGGAAAGCGATGGGACAAAAAATCAACTATTAGATTTCTTGAATTAATGAGTCAGAGAAAAAGTAGGTTGCGTGGTACAAATCCtattgaaagtgaaaaagCATGGCAGGAAATGAGCGATATTTTAGGACtttcaataaaagaattaaaagcaaaaagaCGTTGTTGCTGTACATTGTACCAGCATgaacaaaaattgataaatcgaaaattaagAATACGACCAAAATGGTACGGATTCAATCTAATGTCTAATTTGATTGACGATGATTGTAACGAAATGGATTCCCAAAAGGAAGATCAATTTCGTGATGACGATTCGGTTCAGACCTTTCAAAATGtcttaaatattttagaggATGACCAATCACATGAAAACGATCCGATCCAATGTGATAATGagaGTGATGACTCATGCCAAGAAGTTTCAACTCAACCTTTTGTTGCTG
- Protein Sequence
- MSVKAVEWVPALTLTLIDLYKTKDCFRRQSKDYFFKTKREVAWKEISEVMGISTEQLKLRMSSLKQHYSKEKKAIESQRKTESTWYAFNSLQFLDEVKEVETNQWDPSLSLKLIDLYKGNECLWRPSQQRDIKEKKAAAWNEISRVLNIPAKELKSEVLSLKKLYFEEKQEIQSKRKTESTWFAFDSLSFLDEIHKKTLSARIDVDWNSLLSLKFINLYKERKCLWHPDMRNQLKQTEAWNEISKIMGISVEQLKIKMSSIKNLYSKEKMAIQNNSKKSKWYAFDSLSFLESEEANPSTCKILIKGGNSNDVEENLIKEEYPEIPVVIVKEDHCLDVSSRIEQNLDTKYTSPKKYLNKLLSVGKRWDKKSTIRFLELMSQRKSRLRGTNPIESEKAWQEMSDILGLSIKELKAKRRCCCTLYQHEQKLINRKLRIRPKWYGFNLMSNLIDDDCNEMDSQKEDQFRDDDSVQTFQNVLNILEDDQSHENDPIQCDNESDDSCQEVSTQPFVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -