Calb010556.1
Basic Information
- Insect
- Clogmia albipunctata
- Gene Symbol
- jarid2b
- Assembly
- GCA_001014945.1
- Location
- JXOV01005346.1:15082-20509[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 9.2e+03 -2.8 0.0 48 67 832 849 796 858 0.64 2 2 4.8e-23 1.5e-19 70.2 0.0 6 89 1261 1342 1256 1342 0.93
Sequence Information
- Coding Sequence
- ATGGTGATAATACTCAAAGAGTCGAAAAGGAAGAGGAAGCAGCTACCGGCTGTGGACACACCGATGGCGGCGGATAAACCGAAACGAACAAAAGTTCATGCGCAGCGGAAATTCGCACAAGGCCAAGGTAATTCCCACACGAATCATGCCTCGACTTCAGGAGCCACAGCGTTGGCCTCAAAGGACCCCAGCTCGTCCACGTCCAACAGCTCCAAAGACAACGTAGCCCACGAACAGATCATGCCAGACACGCCTCAGGCAAAGGACTTTCTCACCTATGTCTGCTTCAACAGGAATCCCATTTTCCAGCATTTAAACTACGTTGGACGACCGGTGAAAACCGGGACCTCCAGCACCTCTTCTTCCCCACAGAACCAGGAGAGTGGTAGCAATTCCAGGAAGACGACGCCAAATAATAGAACTCTCGAGGGAGCCAAGAAACGCGTAGAAAACTCAAATTACATTCCGTTTGGAGTGAGAAAACAAGCCGAAACAACACCGacattaattgaaaagaagaTTACCACGACAGAACCATTAAAAACAGAAGAGACGCCTAGTAATGTGAGAAAAACGAGGTCCAAACCACATCCAGAAGAGGACCAAAACTCTGTTAAACAAAACATATCCATAGTAGAGTCAGAAAAGGGAGAAGAGGTCTCAGAAAAGAAGACCGGTAGAAAGAGAAAATCAAAtgcaaaaactgaaattacTCCCGCAAAAGTTGAGCCGAAAGTGAAAGAAGTCACAAAACCGGATCGTGTCACAAGACAAGCAATTTCAAAGCCTCCCTCTGTCGCTGTATCAACGGCAAAGCCCTCGCCAGTTGATGATAAATCAGACTTTTCTTCGGACGACGACAAGCCATTAATAAGTGCAATTGCCAAAAAGGCGAAACTTTTAAAAGCAGAAAACGACATAAAAGTCTCTGAAGAGGAAGTGGAGTCTGTTCCCGGGAAAAGGCAATTGAGAAAATTCGGTTCAGTCCACACTTCAAGTCCAGTCTCTCCAAGCTTTATAAAACAACCTATAAAGGATCGATTAAACGAAGCGAATCGAACAGAATCCCGGAATTCCGTTGACAATAAGCGTCCAGGACGGAATAAAGGTAAATCGACGCCAGTGTCAGACCACGATGACGATCAGAACGAAGACAGTTTACAGAAAACCAAGCCAAAGGCCAAGAAAAAGTTCTTATCTAAGGAATTGGAGAAACTGAACGCAGACATATCGCAGACCACAGAAATAAGTGAGAATGACACCAAGACAGCTCGACCGACTCGCAAAACAAAAGAGGCAGCTACAATTTACATGGAATTGATCGGACATAAGTTAAATTTGCATGACAGCGACGAGGAGGGTGCGTCTTCTCTGGACAGTTTCCCAGAGCTGCCGAATGTTAAACGGACCGAACAGATGGAGAATGAACTGAAGCAGCAAGTTGGGAAGACAAAAGTGGAAAAACGAGGACGAAAACCGAAAAAGGTGGCAGATCCCATGGAAAAATCTCCAGAAAAGGAGGTTGAAACGATGACGGAGCAGAAGCGAGAAAAGGCagtgattaaaaaaatggacAAAAGTTTTAGTGACTCTGACGAGGAACCATTGGCAACTAAGCTGACTAAGAAACCTCGACCACAAGCTTCATCACCagttaaaattgaatcaaaggCTCCTTTTATAAGTCAATCACCAGTAAATGCATTTTCTAAACCAGAATTTAAAAGCGAAGACTCAGTAAAACAATCTCCCAAATTAAATGAAGCAGATGACCTTCTAAACTTCTCACTAACATCTTTCAAGTCCCCAAACACAATTGAAAATCGGTCAATGGAATTGATTACTcctgaaaagtctaaacctgATCAAAGTAAACCTTTAAAACAATCAGTCAAAGATTCTTGGAAAATTGAACCTAAAACTGTGATTGACGATGTGGAATTTCTAAAACCTCCcaacaaattgaaaacattagGAAAGTCAACAGATCAGAAAATAGTGGATGAATCATCGCCTCAGTCAATAGCGAATTTGATGATGAATCCACTGCCGAGTAAAGAAGAATCGGGCAAAATATTTGGCATTGCAAGTGTCACTTTGGCTCAAAGTTCAGGGCCACAGGACACTAAATGCACTTTGGGGCGATGTGGGTCAGTCCATAAGCCGCTGGGTCCAGCTGTTCCAACAGAGGCTCTTCTAGGTGAATGTTCTACGAATAAAGAAAGGAGAAAATCAAAGGTGAACATGAGTAATGAACAGATTCAGAAATGGTTGTTGGATTGCAATGCAGCGCATGATAAAGAGTCAATTCCTGACGATCTTAGCGATATAGACTATAACGCTTCCCCGAAACCACGAACCTATTCCCCATACGTGGATCCCCATGAAGAGTCATCATCGTCAGCCTCGAAAAAGATCACCCAAAACAAGATGCCGATAACAAAGGCGAAAAACCTAATTGAGAAATTCGATGAGGAAAAGGAAGTGGAGGACGAGGTGAACCAGAGTGTCAAGAAAATAATACAGAAGCTCAATTTTGATGACGAAATACCCCAGTCTACGAAAGCCACAAACCCCACAGTTGTTGAGAAGAAGGCAGAACCTCCAAAAAAGGCTATTAAAAAGGAAAAGCCCGTTGTTGAGAAAGCAAACGCCAATCCTCCTGCTCAAGAACAGTCTCCCCTTGATCGAAAACCGATCTATAATAGAAAACCACCAGTGTATAATCCACCTGTAGAAACTCCACcaacaaaaattacaaaaccaaGTAGTTTTACTGCCTTTTCTCCAGAAAATGAGTTTTCAGTTTATTCTTTTGATAAAGAGGAGGATGTTACTCCAATTCAAGCACCTCCTTTCAGAAGACATAGCAGAAGAGAGTCCAATAATGACGAGTCtcctaaaaatataaagaaagaaaagtCTGCCCCAACGACGCCTATAAAAGATGTGGAACAAGAAGTAGCCTTGGCTCTCAGTCCGTCAGCATCTGTAGCGTTAAAGGTGAATCTTAATCCAAAAGAGAAAAGGACCAGCAAAGGGGAAAGTTCTACAACTGCAAaacccaatttaaaaatagctaCTAAAACGGAGGACAATGATTCCGATTCTGAAGGTCACACAATTTACATCCCCCTGCAAGGGACCAACGTGAATCAGAGTGGTAAAAGCGATCAACTTATTCAAGGAGTTGCCGTCAAACTGGGAACAGAAGGTCCTGATGGTTGTGTGGTGATGAAAGCAAAGTTAGTCACAAAAGCCCTAGGTGCTGCAACAAATTCCCTATCCGATGCAAAGACTCAGGAGATTATGAAGACTTTAATGAACTCAAAAGATATTGGTGGTCTAAAGCCAGTTCCAGTGGGGACAGTTCAGCCCAGATTCAAATCGAATGAACCAGCAACATCCACAACAAATCCCTCAAATCTAATGAGAACCGGTTCGAATTCGTCATTGATTTCACAAAAGTCGAAAGTGTCTAAAACCACAATTAAAAACGATACTCCCATACAACCCAGTAATAATACCGCCTTTCCTAGGACAGACGACCCAGCTCAAATGGTCGAGGCTCCAGTGTTCAGACCGACAGAAAAGGAGTTTCAGGACCCGATGGAGTTTATCGAGAGAATTACTCCGATCGCGGCTCGGTTTGGATTGTGTCGTATTATTCCCCCGGCCAGCTTTAAACCAGAGTGCAGAGTGTCTGACGATATGAGGTTCACGGCGTATAATCAGTATGTCCACAAGATGCTGCACCGTTGGGGTCCAAGTGCAAAGGAGTTGAGTGCCATTAGGAAATACTTGGCGACTCAGAGTATTTCAATGGCGCAACCGCCTTGGATCGGTGGAATGGAAGTCGACTTACCTCGACTGTATCACACGGTCCAAGAGTTGGGAGGTCTAAAAGAGGTGATTGAGAAGAAGAAGTGGGCTCGAGTTGCCGAAGAGATGTGCATTCCAAAGGCGGCTCAGGATAGAGTTACAAAACTGGACGATATCTACTGCAAGTATTTACTACCCTATGACACCCTATCACCAGCGGAGAGGCAAAAACTGTTTGATGAGGTGGAGGCGGACTGGGCGAAGAGAGAAGCGAAGGCGAGAAGGAATGCCGATCGTAGGATCGACGAAAGTGAGGACAATCTGAGCAGTTCAGACGACGAAGAAGAGGAGGACGACGATGACAATTTAATGGAGTGTATAATCAAGGGGCGCAGCATGCCGTTGAACGCCTTCTTCAGGATAGCCAGGAACACGATGGCGCTGTGGTTTAAGAACACAGAACCGGTTTCGGCGGATGTGGAGAGTGAATTTTGGCGACACGTTGCGGTTAGAGACAGTCACGTTTGTGTTCATTCCGGATCGATAGACTCCAGTGGATGGGGCTACGGATTTCCCGCTCCAGGGTCCAAGTCTAAAGCATCACCTTGCGCCAAACATCCCTGGAACCTCAAAGTATTAACCAACAACAGTGGATCTGTGCTAAGGTCCCTGGGTCCAGTGATGGGGGTTACCGTGCCCACTCTCCACGTGGGAATGCTATTCAGTGCCTGTTGCTATTATAGAGATCCGCACGGTCTGCCCTGGATCGAGTACCTTCACACGGGAGGGTCTAAAATTTGGTACGGGGTTCCGGATGACCAGAGCACTAATTTCAGGGCGGCGCTCACGTCGTTAGTGCCAACCCACTGTCAGAACAAGACCATTTGGCTGCCCTGCGACACCGCAATGGTCCCACCGCACTTGCTGACGGACAAGGGGGTGTCACTGTGTCGGACAGAGCAACAGCCCGGCCAATTTGTTGTTGTCTTTCCAAGGGCCTACACTTCCAGTATTTCAACGGGCTATGTGGTCTCAGAGAGTGTGTACTTTGCGACAAACAGCTGGTTGGACACGGCTCACCAGGACTTCAATGtaagtcaaatattttaa
- Protein Sequence
- MVIILKESKRKRKQLPAVDTPMAADKPKRTKVHAQRKFAQGQGNSHTNHASTSGATALASKDPSSSTSNSSKDNVAHEQIMPDTPQAKDFLTYVCFNRNPIFQHLNYVGRPVKTGTSSTSSSPQNQESGSNSRKTTPNNRTLEGAKKRVENSNYIPFGVRKQAETTPTLIEKKITTTEPLKTEETPSNVRKTRSKPHPEEDQNSVKQNISIVESEKGEEVSEKKTGRKRKSNAKTEITPAKVEPKVKEVTKPDRVTRQAISKPPSVAVSTAKPSPVDDKSDFSSDDDKPLISAIAKKAKLLKAENDIKVSEEEVESVPGKRQLRKFGSVHTSSPVSPSFIKQPIKDRLNEANRTESRNSVDNKRPGRNKGKSTPVSDHDDDQNEDSLQKTKPKAKKKFLSKELEKLNADISQTTEISENDTKTARPTRKTKEAATIYMELIGHKLNLHDSDEEGASSLDSFPELPNVKRTEQMENELKQQVGKTKVEKRGRKPKKVADPMEKSPEKEVETMTEQKREKAVIKKMDKSFSDSDEEPLATKLTKKPRPQASSPVKIESKAPFISQSPVNAFSKPEFKSEDSVKQSPKLNEADDLLNFSLTSFKSPNTIENRSMELITPEKSKPDQSKPLKQSVKDSWKIEPKTVIDDVEFLKPPNKLKTLGKSTDQKIVDESSPQSIANLMMNPLPSKEESGKIFGIASVTLAQSSGPQDTKCTLGRCGSVHKPLGPAVPTEALLGECSTNKERRKSKVNMSNEQIQKWLLDCNAAHDKESIPDDLSDIDYNASPKPRTYSPYVDPHEESSSSASKKITQNKMPITKAKNLIEKFDEEKEVEDEVNQSVKKIIQKLNFDDEIPQSTKATNPTVVEKKAEPPKKAIKKEKPVVEKANANPPAQEQSPLDRKPIYNRKPPVYNPPVETPPTKITKPSSFTAFSPENEFSVYSFDKEEDVTPIQAPPFRRHSRRESNNDESPKNIKKEKSAPTTPIKDVEQEVALALSPSASVALKVNLNPKEKRTSKGESSTTAKPNLKIATKTEDNDSDSEGHTIYIPLQGTNVNQSGKSDQLIQGVAVKLGTEGPDGCVVMKAKLVTKALGAATNSLSDAKTQEIMKTLMNSKDIGGLKPVPVGTVQPRFKSNEPATSTTNPSNLMRTGSNSSLISQKSKVSKTTIKNDTPIQPSNNTAFPRTDDPAQMVEAPVFRPTEKEFQDPMEFIERITPIAARFGLCRIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIRKYLATQSISMAQPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKAAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADRRIDESEDNLSSSDDEEEEDDDDNLMECIIKGRSMPLNAFFRIARNTMALWFKNTEPVSADVESEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPAPGSKSKASPCAKHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCYYRDPHGLPWIEYLHTGGSKIWYGVPDDQSTNFRAALTSLVPTHCQNKTIWLPCDTAMVPPHLLTDKGVSLCRTEQQPGQFVVVFPRAYTSSISTGYVVSESVYFATNSWLDTAHQDFNVSQIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -