Basic Information

Insect: Cloeon dipterum
Gene Symbol: -
Assembly: GCA_949628265.1
Location: OX451260.1:6035683-6042645[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00019 0.013 15.9 0.6 1 22 124 145 124 145 0.97

2 16 2 1.4e+02 3.3 3.2 3 23 154 174 154 174 0.93

3 16 0.79 57 4.5 0.2 3 23 187 209 185 209 0.84

4 16 0.0043 0.31 11.6 0.0 1 23 213 235 213 235 0.98

5 16 0.0089 0.64 10.7 0.8 1 23 241 263 241 263 0.94

6 16 0.00047 0.034 14.7 0.9 1 23 274 298 274 298 0.95

7 16 0.63 45 4.8 0.0 2 23 321 343 320 343 0.92

8 16 0.045 3.2 8.4 0.9 3 23 351 371 350 371 0.93

9 16 0.00078 0.056 14.0 1.3 2 23 382 404 381 404 0.94

10 16 0.0011 0.076 13.6 0.1 1 23 445 467 445 467 0.97

11 16 0.0012 0.083 13.4 0.1 2 21 471 490 470 491 0.94

12 16 0.0014 0.1 13.2 0.0 1 23 501 523 501 523 0.95

13 16 9.8e-05 0.007 16.8 0.1 1 23 529 552 529 552 0.97

14 16 0.00014 0.0099 16.3 1.9 1 23 558 580 558 580 0.97

15 16 0.00035 0.025 15.1 0.9 1 23 586 609 586 609 0.95

16 16 0.33 24 5.7 0.3 3 21 617 635 615 636 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00019	0.013	15.9	0.6	1	22	124	145	124	145	0.97
2	16	2	1.4e+02	3.3	3.2	3	23	154	174	154	174	0.93
3	16	0.79	57	4.5	0.2	3	23	187	209	185	209	0.84
4	16	0.0043	0.31	11.6	0.0	1	23	213	235	213	235	0.98
5	16	0.0089	0.64	10.7	0.8	1	23	241	263	241	263	0.94
6	16	0.00047	0.034	14.7	0.9	1	23	274	298	274	298	0.95
7	16	0.63	45	4.8	0.0	2	23	321	343	320	343	0.92
8	16	0.045	3.2	8.4	0.9	3	23	351	371	350	371	0.93
9	16	0.00078	0.056	14.0	1.3	2	23	382	404	381	404	0.94
10	16	0.0011	0.076	13.6	0.1	1	23	445	467	445	467	0.97
11	16	0.0012	0.083	13.4	0.1	2	21	471	490	470	491	0.94
12	16	0.0014	0.1	13.2	0.0	1	23	501	523	501	523	0.95
13	16	9.8e-05	0.007	16.8	0.1	1	23	529	552	529	552	0.97
14	16	0.00014	0.0099	16.3	1.9	1	23	558	580	558	580	0.97
15	16	0.00035	0.025	15.1	0.9	1	23	586	609	586	609	0.95
16	16	0.33	24	5.7	0.3	3	21	617	635	615	636	0.91

Sequence Information

Coding Sequence: ATGGAATTGagaGGAATTCCTGCCAGCGCTGAAAATGACAGTTTGGTGGATCTGGACAGTCTCTGCAGAATTTGTGCCCAGTGTTGCACTGAGGGTGGCTTGGAAGCGGCTGCCTTGACCCAAGACAGAATCAAACGCCTCAAGAGTTTTCTTCGAGTTGAtTTCGGCAAAGAGAGCGATATTCTGCCTCGACAGCTCTGTCATGGCTGTGCAAACGTCCTGGACCAGTGGTCTAATACTCAGCTAACTGTGAAAAGggcgaatgaattttttgaaatgcaactGCAGCTGCGAGGGGAAGAATTCCAGATTGCAaagacgAAGAAAAGCAAGAAATCAGCGTCAAAGGGCCGTTCTTTGAATCCACCGTTTAGCTGCAGCCACTGCGAGGAACAGTTTGAGTCATTGGACTCCCTGATTTCGCACCAACGCACCCTGAGGCCAGGGGACGGCCTTGGTTGTCGCATCTGCGCACAGAATTTCAGCCAAACGTGCCATCTGCTCGAGCACACTGGTGAACACCAACGCCTAAACTCGGCCCAGGTTGCCGTTCTCTTCTGCGACGAGTGCTCAGAAGGGCCGTTCGCCTCGCGGGCCTCCCTGCAGACGCACCTGACGCGCAGCCACCTGAAGGCCTTCCCCTGCGGCCTTTGCGGCCTGGGCTTTGACGAGCTGGTCGACTTCTCAAAGCACGTGCAGACGCACATCAATTTCCGGCATTTTCCGTGCGCTTTGTGCGGCTGCCGATTCACCAAACTGGCCTACCTGCTCGAGCACACGGTGCAGCACGCCAGCGCTGCCAACGGCCGACAAATCACCTTTGCCTGCGAGATCTGCCCTGACCAGGTGTTCAGCAGCAAGCACAACCTAGCGTCGCACATGACGAAGAAGCACCGTTCCAAGGGCAAAGAGCGTTCGACCGCCTTTCTGCCGCTGTCCGAACAGGCGGGCCAACAGTTGGAGTGCGGCGTGTGCAGCGAGGTGTTGGGCTCGTGCCAGGCGCTGGCCGACCACATGGCCGAGCAGCACGCCAAGTTCAAGCTGGTGGCGTGCAAGCGGTGCGGCTGCAAGTTCACCAGGCTGCCCTACTACCTGGAGCACGTGGCCGAGCACGTCGCCCACCCGGACAAGGTGCTGTCCGTGCGGTGCGAGGCGTGCCCCGAGATCTTCAGTAGCAAACACAACCTCTCCAAGCACGTTTACAAGAAGCACCGCAACAATTATCCGGCCAAGCAAGGCCAGGATGGAACTGACGCGGGAAATCTACAGGCAATTGACGGTTTGGACGCAGCAAGCAGGTTCAAAGTGGAGCAGGACGCGGCGACAGGGTTGTACCCGTGCCGCAGCTGCGCGGAGAAGTTCAAGAGCGCAGCGCAGTTGAACGCGCACCTCCTGCAGCACGTGCCGGACAAGTGTCCCACGTGCCGGCGGATCTTCGAGGACCGCGAGGCGCTGCGGGTGCACTTGCAGGACGACTGCTGCAGGCGCCGGCCAGAAAAGTTCCCCTGCCCCGTGTGTGGAAAGCTGCTGGCCACCAGGCAGAGTCTCCGCGTGCACGCCTCCCTCCACACCGGCGAGAGAAAATTCGTCTGCGAGGTGTGCGCCAAGTCGTACCGGACGCAGTCGGCGCTGGCAGGTCACCGGAACGTGGTGCACCTGCAGCAGGCGCAGTACATGTGCCACATCTGCGCGCGGACCTTCTCCTTCAAACTGGCGCTGAAGCGGCACGTGATGCTGCACGTGGGCGACCTGCCGCACCGCTGCACCATGTGCGAGCGCGCCTTCGTCACGGCCAACCTGCTCAAGATCCACAAGGCCAAGGAGCACGAGCGGCGCGTCCTGCTCAACTGCTCGGCCTGCTGCAAGGGCTTCGTCGACATGGTCGGCCTCCGCAGACACATGCGCGCCGTCTGCAAGCTCCCGGAGGCCGACATTCCCTACGTCAGGGACAGGCAGTTCGTCCGACGCCCCACTCAAAACTGA
Protein Sequence: MELRGIPASAENDSLVDLDSLCRICAQCCTEGGLEAAALTQDRIKRLKSFLRVDFGKESDILPRQLCHGCANVLDQWSNTQLTVKRANEFFEMQLQLRGEEFQIAKTKKSKKSASKGRSLNPPFSCSHCEEQFESLDSLISHQRTLRPGDGLGCRICAQNFSQTCHLLEHTGEHQRLNSAQVAVLFCDECSEGPFASRASLQTHLTRSHLKAFPCGLCGLGFDELVDFSKHVQTHINFRHFPCALCGCRFTKLAYLLEHTVQHASAANGRQITFACEICPDQVFSSKHNLASHMTKKHRSKGKERSTAFLPLSEQAGQQLECGVCSEVLGSCQALADHMAEQHAKFKLVACKRCGCKFTRLPYYLEHVAEHVAHPDKVLSVRCEACPEIFSSKHNLSKHVYKKHRNNYPAKQGQDGTDAGNLQAIDGLDAASRFKVEQDAATGLYPCRSCAEKFKSAAQLNAHLLQHVPDKCPTCRRIFEDREALRVHLQDDCCRRRPEKFPCPVCGKLLATRQSLRVHASLHTGERKFVCEVCAKSYRTQSALAGHRNVVHLQQAQYMCHICARTFSFKLALKRHVMLHVGDLPHRCTMCERAFVTANLLKIHKAKEHERRVLLNCSACCKGFVDMVGLRRHMRAVCKLPEADIPYVRDRQFVRRPTQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -