Basic Information

Insect: Cloeon dipterum
Gene Symbol: -
Assembly: GCA_949628265.1
Location: OX451262.1:2160893-2170979[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 36 8 5.7e+02 1.4 0.1 8 19 7 18 2 19 0.92

2 36 2 1.5e+02 3.2 2.0 2 23 71 93 70 93 0.85

3 36 9.7 7e+02 1.1 1.3 3 23 115 136 114 136 0.92

4 36 1.3 94 3.8 3.2 1 23 217 238 217 238 0.88

5 36 0.016 1.1 9.9 0.1 2 23 300 321 300 321 0.96

6 36 3.6 2.6e+02 2.4 0.3 2 23 333 355 332 355 0.94

7 36 0.0056 0.4 11.3 3.6 1 20 364 383 364 387 0.91

8 36 3.3 2.4e+02 2.6 0.9 1 21 406 426 406 428 0.75

9 36 0.0079 0.57 10.8 0.7 3 23 476 497 475 497 0.94

10 36 3.7 2.6e+02 2.4 0.3 1 23 503 524 503 524 0.86

11 36 7.4 5.3e+02 1.5 0.1 2 12 541 551 540 561 0.78

12 36 0.45 33 5.3 0.2 3 23 569 589 567 589 0.90

13 36 2 1.5e+02 3.2 0.9 1 23 622 645 622 645 0.91

14 36 0.0081 0.58 10.8 1.0 2 23 720 742 719 742 0.94

15 36 0.0073 0.52 10.9 0.3 2 23 749 771 748 771 0.94

16 36 1.6 1.1e+02 3.6 1.2 1 23 777 798 777 798 0.93

17 36 0.006 0.43 11.2 0.6 2 23 822 844 821 844 0.95

18 36 6.1 4.4e+02 1.7 0.2 1 13 852 864 852 875 0.73

19 36 0.01 0.71 10.5 0.4 1 23 879 902 879 902 0.95

20 36 0.0054 0.39 11.3 1.0 2 23 909 931 908 931 0.90

21 36 0.16 12 6.7 1.1 1 14 937 950 937 953 0.89

22 36 1.8e-05 0.0013 19.2 4.6 1 23 965 988 965 988 0.96

23 36 0.00059 0.042 14.4 0.5 1 23 995 1017 995 1017 0.96

24 36 1.4 99 3.8 0.9 2 23 1025 1047 1024 1047 0.93

25 36 9.7e-05 0.007 16.8 0.9 1 23 1053 1076 1053 1076 0.90

26 36 0.14 9.7 6.9 1.8 2 23 1084 1104 1083 1104 0.96

27 36 3.1e-06 0.00023 21.5 1.0 1 23 1108 1131 1108 1131 0.96

28 36 0.00014 0.01 16.3 4.8 3 23 1142 1163 1141 1163 0.96

29 36 0.00083 0.06 13.9 0.1 2 23 1172 1193 1171 1193 0.97

30 36 1.5e-05 0.0011 19.4 1.2 1 23 1199 1222 1199 1222 0.95

31 36 0.0005 0.036 14.6 2.0 1 23 1229 1251 1229 1251 0.98

32 36 0.084 6 7.6 0.2 1 23 1258 1281 1258 1281 0.95

33 36 0.00039 0.028 14.9 3.9 1 23 1287 1310 1287 1310 0.96

34 36 9.4 6.8e+02 1.1 3.0 2 23 1318 1338 1317 1338 0.77

35 36 0.0017 0.12 12.9 0.6 1 23 1342 1365 1342 1365 0.96

36 36 0.00099 0.071 13.6 2.0 1 23 1370 1393 1370 1393 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	36	8	5.7e+02	1.4	0.1	8	19	7	18	2	19	0.92
2	36	2	1.5e+02	3.2	2.0	2	23	71	93	70	93	0.85
3	36	9.7	7e+02	1.1	1.3	3	23	115	136	114	136	0.92
4	36	1.3	94	3.8	3.2	1	23	217	238	217	238	0.88
5	36	0.016	1.1	9.9	0.1	2	23	300	321	300	321	0.96
6	36	3.6	2.6e+02	2.4	0.3	2	23	333	355	332	355	0.94
7	36	0.0056	0.4	11.3	3.6	1	20	364	383	364	387	0.91
8	36	3.3	2.4e+02	2.6	0.9	1	21	406	426	406	428	0.75
9	36	0.0079	0.57	10.8	0.7	3	23	476	497	475	497	0.94
10	36	3.7	2.6e+02	2.4	0.3	1	23	503	524	503	524	0.86
11	36	7.4	5.3e+02	1.5	0.1	2	12	541	551	540	561	0.78
12	36	0.45	33	5.3	0.2	3	23	569	589	567	589	0.90
13	36	2	1.5e+02	3.2	0.9	1	23	622	645	622	645	0.91
14	36	0.0081	0.58	10.8	1.0	2	23	720	742	719	742	0.94
15	36	0.0073	0.52	10.9	0.3	2	23	749	771	748	771	0.94
16	36	1.6	1.1e+02	3.6	1.2	1	23	777	798	777	798	0.93
17	36	0.006	0.43	11.2	0.6	2	23	822	844	821	844	0.95
18	36	6.1	4.4e+02	1.7	0.2	1	13	852	864	852	875	0.73
19	36	0.01	0.71	10.5	0.4	1	23	879	902	879	902	0.95
20	36	0.0054	0.39	11.3	1.0	2	23	909	931	908	931	0.90
21	36	0.16	12	6.7	1.1	1	14	937	950	937	953	0.89
22	36	1.8e-05	0.0013	19.2	4.6	1	23	965	988	965	988	0.96
23	36	0.00059	0.042	14.4	0.5	1	23	995	1017	995	1017	0.96
24	36	1.4	99	3.8	0.9	2	23	1025	1047	1024	1047	0.93
25	36	9.7e-05	0.007	16.8	0.9	1	23	1053	1076	1053	1076	0.90
26	36	0.14	9.7	6.9	1.8	2	23	1084	1104	1083	1104	0.96
27	36	3.1e-06	0.00023	21.5	1.0	1	23	1108	1131	1108	1131	0.96
28	36	0.00014	0.01	16.3	4.8	3	23	1142	1163	1141	1163	0.96
29	36	0.00083	0.06	13.9	0.1	2	23	1172	1193	1171	1193	0.97
30	36	1.5e-05	0.0011	19.4	1.2	1	23	1199	1222	1199	1222	0.95
31	36	0.0005	0.036	14.6	2.0	1	23	1229	1251	1229	1251	0.98
32	36	0.084	6	7.6	0.2	1	23	1258	1281	1258	1281	0.95
33	36	0.00039	0.028	14.9	3.9	1	23	1287	1310	1287	1310	0.96
34	36	9.4	6.8e+02	1.1	3.0	2	23	1318	1338	1317	1338	0.77
35	36	0.0017	0.12	12.9	0.6	1	23	1342	1365	1342	1365	0.96
36	36	0.00099	0.071	13.6	2.0	1	23	1370	1393	1370	1393	0.94

Sequence Information

Coding Sequence: ATGTGCGAGCTGCGCAGCAAACGTTTTGCGACTCTCTACGCCCTGCGCAAGCACACACCCGATAACCCAAAGGTCCAGCAGCACTCTTGCTATTATTTGAACCCCTCCGATCCGGCCAATTTCGAGTTGAGACCTTGTGCCATTAAGCTGGAAGATATTTCGGATAAACTGGCTCTCCTGAAGCACACAGATGACACCCATTTAGTGCTAACCTGCAAAATTTGCGAGCAATGTTTCCTGTCCGCAGATGAATTGAATTGCCACGTGGAGAGCGAGCATCTCTACTCAGTTGATGACGAATTAGACCAAAATATTGAGAGCGAAGATACTAGCGAACGTGATTGCCTGCGCTGTGGCTTAATGTGCCTCTCGAACAGCGAACTTTCAGCTCACTTCATCCGTAAGCACAGTGTTTGTAACCAGTACCAATGCACTCAATGCTTGACCGTGATGGGAAAGCGCGATCTCCTTAAACACAGCGAGCTCCACGGCCTGCAAGGCAAATGTATGGCTCTGATAAATCCGGAAAGCTTGAACTTCAAACAGCCTGTAGACAGACAGATTCTCTGCATACTCTGCTTTCACCTGTGTTCCAATAGTTATGATTACTCCATGCACTTGAAGTTAAATCACCTCTTGGCCGTTGTCTTCCAGTGCCCTATCTgccaaaaattcatcaaaaagaGAAACCGCAAATCTCACAGAATGTTTCACGcaaggaaagagaaaaagttgAAAGTTCAACAACGACTCGCCGAGAGTGAAGCCAAACAGAAACTCAGAAATCAGCAAAAGGCTGAAACAATCAACAAACAGTTACAGAGGATGAAAGCGAGTATCAAGGAATCTGAATCAAAAAAATCGTTGCCAATTCCTGTTCCAGCAAGCAATCTAGCAGAGTGTGGCTTCTGTCAAATGAGTTTCCCCACGGTGGAAGAACTGGTCACCCACCAATACAGCCACATGACCAACAAGGAGGGCGTCCGGCAGGTGTGGCCGTGCGGATTTTGCTCGGAGTTATTCTTCACCCGCAATAGGATCGAGCTGCACATGATGAAGGAACACGCTAAGGAAAAAAGCATCGACAGAcattgctgcaaaatttgctacAAAATCTTTGACACAAAACCAAACTTGGAGAAGCATGTGTGGACCTATCACTTGGGCGTCGAAAAGCCAGTTCGCCAACCAAAGCCGGAATCGCCGCCTAAACCATTCTCTTGCATGTATTGCAGCAAGGAATTTGTTCTTGAAGTAGATTGCGAAGCTCACGAGTTAAATCACGAAACCATTTCGCTCTCTGTATCAGGAGACAGCTTGGACAAAAGGAAGGAGGCCGCGTCCGCTTCTACAATATGCTCTCAAAAGCCCTGCACCTCCATTGATGAAAAGGCCcgacgcaagaccaaaatgaCCAAGAACCCGTGCGATATGTGCTCTAAAGTATTTAGTACGCCGGAAATCTTGAACAGTCACGTACTAAAGTGCCACTGCAGCACTGCCATGTACCAGTGTACCAAATGCAAGGACATAGTTAAAGCTGCAAACCTCCGCGACCACCGAGCGCAACATGGCATGGTCGAGCCTTTCAGCCTGCAAGAGATCAAGGACGGGACTGTCCGTTGCGAGATTTGCAACATGGAATTCGGTCACAATTTAATTCCACACATGTTGTCCACTCATGATTTCCAAATGTACgtcaaatgcattttttgcggctcaatttttaaagacaaaaaagcTTTCTTGGTGCATGTGGCGTCTCACGCAAATTCAGACACGCTGGTATCCTCTGCTTCCATTGCCGCTTTGCAGAAACCGAAAGTGACCTCTAAAATACCCGTCAGAGAGACGCAGGCAACGCACTATTGCTACATTTGCAATGTAGGTTTCCCGAGTTCCAACATTTTGAGCTACCACACCGCAACTCGCCACAATATCATACAAACTCCTACTTTTTCGGTGGGCAAGCAGACCTCCGACAACAACGAAGCCCCTAACACCCACCAATCGAGCGTGCCCACTTCTGACAATAAGAGCCCCGTGGCGATGCACAAGGGTGCTCTTAAAGAAAAGCAGCTCGTTTGCTACGTTAATCCAGAGGACTTGTTGATGAACCTACGCTCGGTGAAAGAGGAAGGAACTGACGGGCAGCTAACTTGCCATATTTGCCTGAAACAGCTCACAAGCAAAACCGCATTAAATCTTCACATGACGCTGGTGCATTCGTTCAGTGACAAAGTCAAATGCAAAAAGTGTGACGAGACTTTCTACTCAGATGAGAAACTGCTTCTTCACGAGCAAATCGCCCACGAAGGCTACATTTTCTATGAGTGCCTGACGTGCAGCAAAACTCTCATAAGCCATCAGTTGAGCAAACACTTGGCGGAACACGGACAACTGTGTGTTGCTGCTGTCAAATTCGATCCAGAGAAACCGGCGTTCCGAGACGGCCGGCGAATCCGCTGTGAATTCTGCGCCAAAACCTATAACAGTTTCGGCACCCTGGCTCGGCACGTGCGACTGAAGCACGAGAAGAGCTCTGCCTTGGAGCACGAATGCAGCATCTGCCAGGCGAGATTCGCggccaaaatcattttagactACCACGTGCGGGAGCAGCACAAAAAAGAATTCGTGTGCGATATGTGCGGCAAGAAGGTGTTCAACCGCGCGCGCTTCATGACGCACATTCTCAACGTGCACAAGATCGAGTGGCGGGTGCCGTGCAGTTTCTGCTTCAAGCGCTTCAGCTCGCGCAAGCTGATGAAGAAGCACGTGGAGGCGGACCACGGCGGCAAGCCCGAGCACGTGTGCAAGTTCTGCAAAAAGGTGTTCAAGAGCAGGACGGCGCGCGAGAACTGCGAGCGCAAGCACGAGGACGTGCGCCCGTTCACGTGCGAGTTTTGCGGCAAGTCGTTCTGCTCCAAGTACGACCTGACCTCGCACAGGACCAGGGTGCACATCAAAACGGAGAAAATATTCATCTGCCACATTTGCGGCAAGGGCTACTCGCGCAGGCAGCCGCTGCTCGGCCACGTGCTGCGGCACGACTCGTCCGAGAAGAAGTGGCGCTGCGACTTTTGCGGCCACCTCACGTTTACCAAGGTGGAGATCAGGCTGCACATCGAGACGACCCACCTGAAGAACAAGGAGTTTTTGTGCACGCAGTGCGGCAAACGCTTCGGCACGAAGGCCTACCTGAAAAGTCACATTTACGAGATGCACAGCGAGGTAAAGCCGACTAAGACGTGCAACCTGTGCAACAAGACTCTAACCCTGAGAAGTTACCGGGACCACATGAAGGCCCACACAACCGTCTACGATTGCGAAATCTGCGGCAAACCGTTCGGCCGCAAGGCGCACTTGTTGCGACACAGAAAGAACTTGCACGGGGCAGCACCTGCAGACGAGCGCGTTGCCTGCGATTACTGCCCAAAAAGCTTCTGCAGCTTGTCCACGTTGCGGCACCACCTGAAACAGTTCCACAGAAACGCTGTGGCGAACAAACTCACTTGCGGCCAATGCAATAAAGCATTCGCGGCGAAAGCCTTGCTAGACGATCACATTCGGAAGCACTCCGATTTGCGCTCTTTCGTCTGCGAGGTCTGCGGCAAGAGCTTCTTCACATTTTACGACCTGAAAAAGCACCGGGTCCGTGTGCACGTAAACACGGAAAAAATTCACACGTGCCACATATGCGGGCTGGGTTTCTCGATGAAGGCCACGCTGGACAACCACGTGCAGAGGCACGACCAGACGGAGCGCAGGTTTTACTGTGACCTGTGCGGCTACGGCGCGTACAAGAAAACCGACCTGGCGATGCACCTCGCGTCCACGCACCTCAAATCGAAACAGCACTCGTGTCCACACTGTGACAAGCGCTTCGGCTGGAAGTCGACCCTGCAAAAGCacataaaaaatctgcacaaagAGGCGCAGCAGAGCAAGCAGTGTCCGCTGTGCAGCAAAGTGCTCAAGCACTGGTGTTTCGCCGAGCACCTCCAGTCGCACACGCAAAATTTCGAGTGTGATATTTGCAAGGCTAATTTTGGCCGCAAATTGCTGCTTCGGCGGCACAAGTTGAAAGCGCACAACGTTTTGATGCACGAGTGCGAGTTTTGTGAAAGACGGTTCGCTCGGAGAACGGAATTAAATGTACACCGCTACAGTGACCATAAGCTAGAGGTCTCgaataaatga
Protein Sequence: MCELRSKRFATLYALRKHTPDNPKVQQHSCYYLNPSDPANFELRPCAIKLEDISDKLALLKHTDDTHLVLTCKICEQCFLSADELNCHVESEHLYSVDDELDQNIESEDTSERDCLRCGLMCLSNSELSAHFIRKHSVCNQYQCTQCLTVMGKRDLLKHSELHGLQGKCMALINPESLNFKQPVDRQILCILCFHLCSNSYDYSMHLKLNHLLAVVFQCPICQKFIKKRNRKSHRMFHARKEKKLKVQQRLAESEAKQKLRNQQKAETINKQLQRMKASIKESESKKSLPIPVPASNLAECGFCQMSFPTVEELVTHQYSHMTNKEGVRQVWPCGFCSELFFTRNRIELHMMKEHAKEKSIDRHCCKICYKIFDTKPNLEKHVWTYHLGVEKPVRQPKPESPPKPFSCMYCSKEFVLEVDCEAHELNHETISLSVSGDSLDKRKEAASASTICSQKPCTSIDEKARRKTKMTKNPCDMCSKVFSTPEILNSHVLKCHCSTAMYQCTKCKDIVKAANLRDHRAQHGMVEPFSLQEIKDGTVRCEICNMEFGHNLIPHMLSTHDFQMYVKCIFCGSIFKDKKAFLVHVASHANSDTLVSSASIAALQKPKVTSKIPVRETQATHYCYICNVGFPSSNILSYHTATRHNIIQTPTFSVGKQTSDNNEAPNTHQSSVPTSDNKSPVAMHKGALKEKQLVCYVNPEDLLMNLRSVKEEGTDGQLTCHICLKQLTSKTALNLHMTLVHSFSDKVKCKKCDETFYSDEKLLLHEQIAHEGYIFYECLTCSKTLISHQLSKHLAEHGQLCVAAVKFDPEKPAFRDGRRIRCEFCAKTYNSFGTLARHVRLKHEKSSALEHECSICQARFAAKIILDYHVREQHKKEFVCDMCGKKVFNRARFMTHILNVHKIEWRVPCSFCFKRFSSRKLMKKHVEADHGGKPEHVCKFCKKVFKSRTARENCERKHEDVRPFTCEFCGKSFCSKYDLTSHRTRVHIKTEKIFICHICGKGYSRRQPLLGHVLRHDSSEKKWRCDFCGHLTFTKVEIRLHIETTHLKNKEFLCTQCGKRFGTKAYLKSHIYEMHSEVKPTKTCNLCNKTLTLRSYRDHMKAHTTVYDCEICGKPFGRKAHLLRHRKNLHGAAPADERVACDYCPKSFCSLSTLRHHLKQFHRNAVANKLTCGQCNKAFAAKALLDDHIRKHSDLRSFVCEVCGKSFFTFYDLKKHRVRVHVNTEKIHTCHICGLGFSMKATLDNHVQRHDQTERRFYCDLCGYGAYKKTDLAMHLASTHLKSKQHSCPHCDKRFGWKSTLQKHIKNLHKEAQQSKQCPLCSKVLKHWCFAEHLQSHTQNFECDICKANFGRKLLLRRHKLKAHNVLMHECEFCERRFARRTELNVHRYSDHKLEVSNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -