Basic Information

Insect: Cloeon dipterum
Gene Symbol: -
Assembly: GCA_949628265.1
Location: OX451261.1:26006432-26011264[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.012 0.85 10.3 2.8 2 23 120 142 119 142 0.94

2 17 0.22 15 6.3 2.5 3 23 153 173 151 174 0.93

3 17 8e-05 0.0057 17.1 0.9 2 23 182 203 181 203 0.97

4 17 0.16 11 6.7 1.2 3 23 209 230 208 230 0.94

5 17 0.00025 0.018 15.6 1.8 1 23 234 256 234 256 0.97

6 17 0.00021 0.015 15.8 1.3 1 23 421 444 421 444 0.95

7 17 0.086 6.2 7.6 1.9 1 23 453 475 453 475 0.82

8 17 0.01 0.72 10.5 3.7 2 23 490 512 489 512 0.95

9 17 0.0033 0.24 12.0 4.2 1 23 525 548 525 548 0.94

10 17 2.4e-05 0.0017 18.8 2.0 1 23 557 579 557 579 0.99

11 17 6.8e-06 0.00049 20.5 0.9 2 23 586 608 586 608 0.96

12 17 2.8e-05 0.002 18.5 1.5 1 23 652 675 652 675 0.96

13 17 1.8e-05 0.0013 19.1 2.9 1 23 865 888 865 888 0.97

14 17 0.00045 0.032 14.7 3.0 1 23 894 917 894 917 0.95

15 17 1.6e-05 0.0011 19.3 1.2 1 23 922 944 922 944 0.98

16 17 3.9e-05 0.0028 18.1 3.2 1 23 950 972 950 972 0.98

17 17 0.00074 0.053 14.0 0.5 2 23 980 1002 979 1002 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.012	0.85	10.3	2.8	2	23	120	142	119	142	0.94
2	17	0.22	15	6.3	2.5	3	23	153	173	151	174	0.93
3	17	8e-05	0.0057	17.1	0.9	2	23	182	203	181	203	0.97
4	17	0.16	11	6.7	1.2	3	23	209	230	208	230	0.94
5	17	0.00025	0.018	15.6	1.8	1	23	234	256	234	256	0.97
6	17	0.00021	0.015	15.8	1.3	1	23	421	444	421	444	0.95
7	17	0.086	6.2	7.6	1.9	1	23	453	475	453	475	0.82
8	17	0.01	0.72	10.5	3.7	2	23	490	512	489	512	0.95
9	17	0.0033	0.24	12.0	4.2	1	23	525	548	525	548	0.94
10	17	2.4e-05	0.0017	18.8	2.0	1	23	557	579	557	579	0.99
11	17	6.8e-06	0.00049	20.5	0.9	2	23	586	608	586	608	0.96
12	17	2.8e-05	0.002	18.5	1.5	1	23	652	675	652	675	0.96
13	17	1.8e-05	0.0013	19.1	2.9	1	23	865	888	865	888	0.97
14	17	0.00045	0.032	14.7	3.0	1	23	894	917	894	917	0.95
15	17	1.6e-05	0.0011	19.3	1.2	1	23	922	944	922	944	0.98
16	17	3.9e-05	0.0028	18.1	3.2	1	23	950	972	950	972	0.98
17	17	0.00074	0.053	14.0	0.5	2	23	980	1002	979	1002	0.95

Sequence Information

Coding Sequence: ATGGAACCCGTGAATAAGGAAGACGAAAGTAGTGTCCTTCTTATGAAAGACATAATGGACATTGAGGATCAGCAATGTGCACTCGAAGTCTATTCAATGCGTAACAATGACGAGTTTGAAACATTGCCAGACTTCCCAGATGAAATTCACATTGACATGAACATGTATCACGAAGAATTCCCATACGGTCTTGAAGAGATGACATCAATACCAAAAAGGATCACTGCAGCAAATCAGGTTTTGCCTTTGTTCAAGAGTGTGTATGAAGACCGCTCTCAAGAGGAAGAAATTAGCCTGGCCAACGAGTGGCAAGAAATATTCCAGTCTCTGTCGACTGGCTCCATCAGAGACCATTGTGAGTGTCTGCTGTGCAACTGCTTTTTTGTCACTCCATCAAAACTCTTGAATCATGTCAATGTTTCTCACCCCCACTTTGGGTCCAAAGAGCTGCAGCATTGCTATGTGTGCAGCCAACGTTTTGTGTTTCCAAAAGCCTTGTCCCTGCACCTGGAACAACATCATGGGCTCTTAGCTCCGCACCTCACCTGCTCAGTTTGTTTCACGCAGCTCAGTTCCCAGTCTGAGTTAAAGGCCCATATGCGCAAGCACAGTCTCATCGAATCCTGCCAATTTTGCTATAGTCATTTTCCCTCCAAACAGCAATTGGCCCAGCACCTCGCCTCTGTGCACGTCAAACAGTTCCCATGTCCATACTGCAGGAAGTCTTTTGACCACAAAGCAGTCTACAGATCCCATTTAGCCAGGCATGAGTCTTTTTCCACCGCGCCCTGTGTTCACTGCAAATGGAAACCAAGTCAGCAGTTAATTGATCCTGAATTGGCCATGCTGCAACACTTGCACACATACCACACTCCAGACCAGTTGCAGTTTTTCTTTGATACAGTTGTGGAAGAAGACAAGCATGAactggaatttgaaaatttactaaGAGCCTATGAAGAATCGTctgcatcaattttaaatGTGTCAGAAGAAAGTCACTGCCTTGAGGCAATTTTGAGTAGCGTAGAAAAAGTGGTCGGAGAGCTGAAAAATACAGAGGATGTCGACACCCAAGTTATTCGATTGTGCAAACTATGCACTAAGGAAGTCCAGAGTCTGGATGAAATACCAGACCATGTGCAGGAATTCCACCCAAAAAGCAAGCAGTGTCCCATCTGTAAGAGTAGGTTTCCTACTGTAAAAAGAGCCCAATGTCACACAAGACTGCATCTGAAGACTGAACCTGAACAAAAGGAATACAAGTGCCAATTCTGTGACATGGAATTTAAAGATACTGGCAAGTTGAACAGACATTTAGAAAACTCTCACAAGatcagCATTCTTGTCAGACCTTTCAGCTGTTCTGTTTGCAACAAATCCTTCAAGCTAAAAACCATCAGGGATAAgCATCTTTCAACCCACCAGGAGATTTTTAAAGCCAATAGAGAAGAAAATATCTCACtgagatgcaaattttgcaactgcATCTTTATCAAATCCAGCTATCTTGCCAAACACACCGAGAAATACCACAGCagtgCTCTCTCATCTGCTGATGGAAAAGCAAGCTTTCAGTGTGCGCACTGCAAAGAGCATCTCAGTGACTTGTCCAAGCTCAAGCGGCACATGGTGTACAGACATGGGGCCGCGTCGGACAAATGTCGGTTTAAGTGCAACCTCTGCAAGGTCAGTTGCCGGACAGCAGTGGGACTGAAGGTTCACATGCGGACACACACCAACTTAAAGCCTAATGAATGCAAAATATGTGGCAAAGGATTCAACCGAACCCATGCTTTGAATCTCCACATGAAAATCGTGCACTCAATCAACACACACCTTAAGCAAAGCAAAAAGATGTACTTATGTGCCCAAAGTGGGTGCTCTAATCAGCAGCCAACTTACGCTGCGATTCTGAAACACTTTCTCCGGGCACACCGTGAtgttaaaagatttatttgcGGTCTTTGCGGAGAGTGCTACTCCCAAAACCAGGAGTTGAAGATCCACATGAAgaacaaacataatttaattgcgcCAAGTATTTCTATCAAAGAGTCAAACAAGCAGACtgatATCCACGTTTTTCCTTCGGTAGAAAAACTTCCGGCTAGTCACCCTCATGCAATGCTAATAACTCAAATATACGAAGACCAGTTGAAGAAGACGTTAAATTTGCCTGATTTCCAAGCAGCTGAGGAGATAgGAGATGTTCAGTCTGACCATAAATTTAGCGAAACTGAGAAGAAACAAACTAAAGAAGTGAAGCAAAATCAAGAACTACCTCTCAATGAGACAATAATTTACGACACTGACCGATACCAGACTGCATTTCCCGACTTGGAAGCCATTGCTGCACCCAATTCCTTAGCAGCAGTCAACAAAGAAACTTACATGAGCATCATTGGTAAAGCCTATGATAAGCTGACTCCACAGTACCCTGAAATGGTTGCTGCTGTTGTAAACTTACCTCCAAAAGAGGAAGAATTTGCCATCTCTCAGCCAATTGTGATATCAAGCAGCACCCAAGAAAGCGATGAAGTTATGCTGGAGGAGCACAAAAAGGTCCATCAGTTGTCTAAAAGATCCAACCATGTTTGTCCACACTGCCCAGATCGAGTTTTCAAGAGATCAAGTGACCTCCAAAGACACCTTAAGAGCCACCAAGAGAACAGAAGTCATCATTGTGACCTGTGTGGAATTGGGTTTACAAGAAAGGATACACTGCTGGTTCACCAGACCAGAAAACATGGATTGCAGAACTTTAACTGTGAAACTTGCGGCAAAATCTTCAAGCTAGAGAGTCAGTTCAAGGAGCACGTCAGAACCCATGCAGAGCGAAAAGATCACAAGTGTGATATTTGTGGGCGTTTATTCACTATGAGAAGCTACCTTAATAGCCACCTGAAGCGGCACGTGAAGCAAAAGGACTACATCCCATGTCCCAGCTGCCCCAGGAAATTCAGCtctgaaaataatatgcaGgTGCACAAAAAGAGTTTTCACGCTAAAGGAGCGATGCTTCTCTCAAGACAACAGAAACAAGATGCACAGAGGCAGGAGGAGGTGCAGAAAGCCACCTTGGCAGCCAACCTGGAGGATGAAATGCTCCAGGTCGACTACTACCTTGAAGACAGCCAGGCTGTGTGCCTAAAGGTACTTTCGGATGCAGACCTGGAATTTCTGCCGTCATGA
Protein Sequence: MEPVNKEDESSVLLMKDIMDIEDQQCALEVYSMRNNDEFETLPDFPDEIHIDMNMYHEEFPYGLEEMTSIPKRITAANQVLPLFKSVYEDRSQEEEISLANEWQEIFQSLSTGSIRDHCECLLCNCFFVTPSKLLNHVNVSHPHFGSKELQHCYVCSQRFVFPKALSLHLEQHHGLLAPHLTCSVCFTQLSSQSELKAHMRKHSLIESCQFCYSHFPSKQQLAQHLASVHVKQFPCPYCRKSFDHKAVYRSHLARHESFSTAPCVHCKWKPSQQLIDPELAMLQHLHTYHTPDQLQFFFDTVVEEDKHELEFENLLRAYEESSASILNVSEESHCLEAILSSVEKVVGELKNTEDVDTQVIRLCKLCTKEVQSLDEIPDHVQEFHPKSKQCPICKSRFPTVKRAQCHTRLHLKTEPEQKEYKCQFCDMEFKDTGKLNRHLENSHKISILVRPFSCSVCNKSFKLKTIRDKHLSTHQEIFKANREENISLRCKFCNCIFIKSSYLAKHTEKYHSSALSSADGKASFQCAHCKEHLSDLSKLKRHMVYRHGAASDKCRFKCNLCKVSCRTAVGLKVHMRTHTNLKPNECKICGKGFNRTHALNLHMKIVHSINTHLKQSKKMYLCAQSGCSNQQPTYAAILKHFLRAHRDVKRFICGLCGECYSQNQELKIHMKNKHNLIAPSISIKESNKQTDIHVFPSVEKLPASHPHAMLITQIYEDQLKKTLNLPDFQAAEEIGDVQSDHKFSETEKKQTKEVKQNQELPLNETIIYDTDRYQTAFPDLEAIAAPNSLAAVNKETYMSIIGKAYDKLTPQYPEMVAAVVNLPPKEEEFAISQPIVISSSTQESDEVMLEEHKKVHQLSKRSNHVCPHCPDRVFKRSSDLQRHLKSHQENRSHHCDLCGIGFTRKDTLLVHQTRKHGLQNFNCETCGKIFKLESQFKEHVRTHAERKDHKCDICGRLFTMRSYLNSHLKRHVKQKDYIPCPSCPRKFSSENNMQVHKKSFHAKGAMLLSRQQKQDAQRQEEVQKATLAANLEDEMLQVDYYLEDSQAVCLKVLSDADLEFLPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -