Basic Information

Insect: Cloeon dipterum
Gene Symbol: ND-42
Assembly: GCA_949628265.1
Location: OX451259.1:40470119-40477672[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.1 7.2 7.3 2.0 1 23 581 603 581 603 0.97

2 17 0.0019 0.14 12.8 3.4 1 23 609 631 609 632 0.93

3 17 0.00044 0.032 14.8 0.2 2 23 638 659 637 659 0.96

4 17 0.22 16 6.3 0.0 2 23 666 688 665 688 0.93

5 17 0.00044 0.031 14.8 1.6 1 23 701 723 701 723 0.98

6 17 1.2e-06 8.8e-05 22.8 2.7 1 23 747 769 747 769 0.98

7 17 2.9e-05 0.0021 18.5 0.4 1 23 775 797 775 797 0.97

8 17 9.6e-05 0.0069 16.8 1.6 1 23 803 826 803 826 0.94

9 17 0.014 1 10.0 5.2 1 23 836 859 836 859 0.96

10 17 1.2e-06 8.5e-05 22.8 5.1 1 23 931 953 931 953 0.98

11 17 1.9e-05 0.0014 19.1 1.2 1 23 959 981 959 981 0.99

12 17 0.00038 0.027 15.0 0.1 3 23 989 1009 988 1009 0.97

13 17 2.9 2.1e+02 2.8 1.3 2 19 1016 1033 1015 1035 0.84

14 17 6.5 4.6e+02 1.6 9.4 1 23 1100 1122 1100 1122 0.96

15 17 2.3e-06 0.00016 21.9 2.0 1 23 1128 1151 1128 1151 0.94

16 17 0.00012 0.0085 16.6 5.3 1 23 1158 1180 1158 1180 0.98

17 17 0.00016 0.012 16.1 1.9 1 23 1186 1208 1186 1208 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.1	7.2	7.3	2.0	1	23	581	603	581	603	0.97
2	17	0.0019	0.14	12.8	3.4	1	23	609	631	609	632	0.93
3	17	0.00044	0.032	14.8	0.2	2	23	638	659	637	659	0.96
4	17	0.22	16	6.3	0.0	2	23	666	688	665	688	0.93
5	17	0.00044	0.031	14.8	1.6	1	23	701	723	701	723	0.98
6	17	1.2e-06	8.8e-05	22.8	2.7	1	23	747	769	747	769	0.98
7	17	2.9e-05	0.0021	18.5	0.4	1	23	775	797	775	797	0.97
8	17	9.6e-05	0.0069	16.8	1.6	1	23	803	826	803	826	0.94
9	17	0.014	1	10.0	5.2	1	23	836	859	836	859	0.96
10	17	1.2e-06	8.5e-05	22.8	5.1	1	23	931	953	931	953	0.98
11	17	1.9e-05	0.0014	19.1	1.2	1	23	959	981	959	981	0.99
12	17	0.00038	0.027	15.0	0.1	3	23	989	1009	988	1009	0.97
13	17	2.9	2.1e+02	2.8	1.3	2	19	1016	1033	1015	1035	0.84
14	17	6.5	4.6e+02	1.6	9.4	1	23	1100	1122	1100	1122	0.96
15	17	2.3e-06	0.00016	21.9	2.0	1	23	1128	1151	1128	1151	0.94
16	17	0.00012	0.0085	16.6	5.3	1	23	1158	1180	1158	1180	0.98
17	17	0.00016	0.012	16.1	1.9	1	23	1186	1208	1186	1208	0.98

Sequence Information

Coding Sequence: ATGAGCTCGGGGGTCGTGTTGGGGCGGTTTATCCTGCGGCCCGTGCGGCCCATCAGCTGCCTGGGCCGGCGGGGGATCTCGGGCAAGGCCCTGCGCGACCCCACGTACAAGAGGCCCAAGCCGTGGCCCTACACGGAGAAGAAGCTGACCTTCTTCGACGCCTTCTTCATGCGCGAAAGCACCACCGGCCGGATGGACGAAAACTCGAAAATCGTCGTGGTCGAGGGCCCAATCGGCTCGGGCAAGACGGCGGCCGCGAAAAAGCTGGCCGAGGAGCTGGACATGCTGTACGTGCCGGACGGCAACCTGGACATGCACTACGTCAACAGCTACGGCTTCGACACGCGCACCCTGGACGAGCAGCTGCCCGCCTCGTGCCAGAGCTTCGACATCAAGCACTTCCACAAGGAGCCGAACGACCGCAGGGTGGCCCTGATGCAGTGTCTCATGTACAAGATGCGCTACAGGCAGTACGTCAAGGCCCTGGCGCACCTTTTCAGCACCGGACAGGGCGTCGTGCTCGACCGCAGCTGCTACAGCGACTTTGTCTTCACCGAGGCGATGTTCAAGAGCAATTTGATCAGCAAGGAAGCCTACGAAATGTACTACCGATTCCGGGAAAACACGATTTCCCAGCTCCTGAGGCCGCATTTGGTTATTTACTTGGACGTGCCCGTCGCCACCACCTTGCAGAACATCAAGAAGAGGGCCCTGCCTGACGAGAAGGATTCCAAGGCGTTGACTGAAAAATTCGTCACGGACCTGGAGGACTCGATGAAGAACAAGTATCTCAAAGATATCAGCTCTCATGCCGAGCTGCTTGTGTACGATTGGTCGAGCCACGGCGACGTGGAGGTCGTGGTCGAGGACATCGAGCGGGTGAATTTTGACAACTACGAAGATGAAGACCCGAAACTGCGTGACTGGAGGGACCTGGGCGACGAGTGGGACTGGCACAAGCACCGAAAAATGTACGCCGACAGGCAGGAGTGGCTCGAGTCCTTCTTCATCGTGCCCATCCACACTGCGCCTGAATTGCTCGTCGAGGGAGACGACGCCTGGGTCTACAATAACGTCATGGAATcgGCGCCTGGCAACCAGTATAACAGGGGCTTCAACGCCAGCCTCGGTGACAAGGGCATTCTCTTCAAACTGGAAATGGACACGCAGAGCATAATAATCACGAGCAACGACGAGGCTCCCGCCGGGACGGTGTTTTCGACGCCCGAGGGCCACCTGATCATGACCGTCCCTCTTGAGGACATGGGCGGAGACAACAGGCAGAACATCATCAACTATCCTCTGATCATCACCGCCGACGGCAGCATCACTGCCGCCAGCAACATCCAGCTGGACACCGTGGAGACCATCAACGCCAAGGACAAAATcaagcagcaacagcagcagcccgTCTTCGCTCCGGGAACacagttTGTGCTAGTCACGGACGACTCGCTAGGCCAGAGAATGATTCTGACCACCGCTGACGGAAAGATCGACGGTTCGTTCACCCTGCAAACTCAGACCAATGCTGTCGAGCAGGTCAACCCTCTCTCCAACATCACCTTCAGCGCTCCCAATCAACAAAACACAGTCGTGACGAACCTGATCAACACGACCGTTCAGATTCCTCCGAGCATGGAGACGGAGCCGAGTAGCGCAATTAATTACATTCCGCAAGTTACCGCACCCACCCCCGCCAAAgacgaaaatgaaaatcgacctccaatcgcAGGGCCGCACAAGTGCAAGGTTTGCCAGATGGAATTGCGGACGTGGGCGCTGAAGAGGCGGCACGAGCTGCGACACCTGCTGGACAAGCCGTTCCCCTGCAAAGACTGCCACATGTCGTTCAACCACGAGGCGAACCTTTTGCTTCACGAGGGCAGCCACCACGAAGGGCCGATCTGGACATGTCCGTTGTGCGAGCGAAAGTTCAAACGGCTGGCCGGCTACAAAGCGCACACTTTGGTGCACGATAAGGAAGAAAGCATCACCTGCGAGGCGTGCGGCGACGAGTTTCCCACTGAGAAATACCTGGAATTGCACATGGAGGAGAAACACGCGAATCCAGAAGAGTCTGGAGAGATCGTCATCAGCTACGAGTGCAATATTTGCAAGAATATTTTCAACACCTGCGCTGCTTTCAAGGCGCATATGAAGGACCACAATAAgCTGGAGCAGAGTCTGAAAGTGACACAACTAAGAAAAGGATcgccaaacaaaaaatccgGAGCGCACAAGTGTCCGTTGTGCGACAAAAGGTTCAACAAGCCCTCCCTGCTGAAGAGACACAGAGCCACCCACAGCGGGGAGAAACCCTTCAAGTGTGATTTGTGTCCTCGTGGCTTCTCGCAAAAAGGCTCTCTTTTGCTGCATATGTACCTGCACAGGGGCGAAAAACCCCACGCCTGCAACTTTTGTACAGCTTCCTTTTCGCAAAAagGAAATCTGCGTTCTCACATAGCTCGCACGCACGCCATACAGAAATCCGGCGAGCCGCTGTACCAATGCCACCAGTGCCCTTGCAAATTCAGGAAAATCGGCTCGTTGAACACGCACGTCACCAAAAACCACTCAACGCACATCAAACCACCTGAAGAGCAGAAACACAACCTTGCAGACTCTGACATTCTGCAGCAGGCGATCGCCCAGAGCGGTTTGGAAAATGctcCCAAGACTGAAGGGTGTGCCGAGACTGAAATTGTGCAGGTTATCGCAGACTCCATGCAGGACGGAACCACAAAgcaTTACGAAATTAGTGTTCGGCAGCGTGCTGGCTTCCGCTGGCACCAATGCAATCACTGCagcaaagaatttaaaaagccCTCTGATCTGATTCGCCACCTCAGGACGCACACCAATGAGAAACCTTTCAagtgtgATTTTTGCCAACGGGGTTTCACGGTGAAGTCGACCCTGAACGTCCACCTGCTGACGCACTTGCCGCAGAAACCTGCCATCTGCACCATTTGCAACAGGAAATACAACTCGGCTGCTTCCCTCGCGGCTCACgtcaaGAGCCACTCGAACACAAAGACGTTGAAATGCAGCTTCTGCGAGAAGACCTACACCGCCTTGGGGAACAAGGAAAGTCACGGCTGCGAGGAGCAGAAGCGGCACGCGCAGGAAAAGAAGCAGAAGAAGATTTTGGAGAATAAGTTGCTCGAGGAGAAGCTGAAGGAGTCGCTGCAGTATCTGCACGATCCGCTCTTCGCTTCCGAGAAGGGAATGATCGCGATTAACAAGAGGAAAGGCTCGGCCTCCAACCGTCCGGAGGATTACGCCGAGCGGCCTCACGTTTGCACGCGTTGCAGCTGCCGATTTAAGAAAGTTTGCCATTTAAAAGCGCACGAAGCTTCGCACGACGGCATCAAGAGGTTCCTTTGCCACGACTGCGGAAAGTCATTCACGTCGAAAGCTGCTATGAAACACCACATTATGGTCGCGCACACCAAGGCTGGACCGATTTTCCAATGCACCAAATGCAACTCTTCCTACACTACAAAGggGTGTCTGAAAAGGCACATGTTGAGCCACTCGTCGCAGAAATCGTACATCTGTCCGTACTGCGAGCGGCCGTTCTCGTACTCGTCGGCGTGCCGGCAGCACATCAAGACGCACGCCCGCGAGGTGATCAACAACCACGAGCGCAGCAAGCGCAACGTCAAGGCCGCCGTGCTGGTCACCAAGGACGACGCGCTGGCCGGCGGACAGACGCAGAACGTCGTCGAATTGGTCAACGCCGTCGAGCAGCAGCGCTCCCTCTCGGTCATCAACACGCAAAACAACCCTTTCGCGCAGCCCGTCATGGCCAAATACGCCGTTCAGGTCCAGGGCGTTAGAAGTCAAAAGTTTATTAGCGATGAGTGCCACGTGACCTctggcgaccaatcagagaaagGAGAGCGGCTGCGGCACTCTGATTGGCTGGTTTACGTCACGTGA
Protein Sequence: MSSGVVLGRFILRPVRPISCLGRRGISGKALRDPTYKRPKPWPYTEKKLTFFDAFFMRESTTGRMDENSKIVVVEGPIGSGKTAAAKKLAEELDMLYVPDGNLDMHYVNSYGFDTRTLDEQLPASCQSFDIKHFHKEPNDRRVALMQCLMYKMRYRQYVKALAHLFSTGQGVVLDRSCYSDFVFTEAMFKSNLISKEAYEMYYRFRENTISQLLRPHLVIYLDVPVATTLQNIKKRALPDEKDSKALTEKFVTDLEDSMKNKYLKDISSHAELLVYDWSSHGDVEVVVEDIERVNFDNYEDEDPKLRDWRDLGDEWDWHKHRKMYADRQEWLESFFIVPIHTAPELLVEGDDAWVYNNVMESAPGNQYNRGFNASLGDKGILFKLEMDTQSIIITSNDEAPAGTVFSTPEGHLIMTVPLEDMGGDNRQNIINYPLIITADGSITAASNIQLDTVETINAKDKIKQQQQQPVFAPGTQFVLVTDDSLGQRMILTTADGKIDGSFTLQTQTNAVEQVNPLSNITFSAPNQQNTVVTNLINTTVQIPPSMETEPSSAINYIPQVTAPTPAKDENENRPPIAGPHKCKVCQMELRTWALKRRHELRHLLDKPFPCKDCHMSFNHEANLLLHEGSHHEGPIWTCPLCERKFKRLAGYKAHTLVHDKEESITCEACGDEFPTEKYLELHMEEKHANPEESGEIVISYECNICKNIFNTCAAFKAHMKDHNKLEQSLKVTQLRKGSPNKKSGAHKCPLCDKRFNKPSLLKRHRATHSGEKPFKCDLCPRGFSQKGSLLLHMYLHRGEKPHACNFCTASFSQKGNLRSHIARTHAIQKSGEPLYQCHQCPCKFRKIGSLNTHVTKNHSTHIKPPEEQKHNLADSDILQQAIAQSGLENAPKTEGCAETEIVQVIADSMQDGTTKHYEISVRQRAGFRWHQCNHCSKEFKKPSDLIRHLRTHTNEKPFKCDFCQRGFTVKSTLNVHLLTHLPQKPAICTICNRKYNSAASLAAHVKSHSNTKTLKCSFCEKTYTALGNKESHGCEEQKRHAQEKKQKKILENKLLEEKLKESLQYLHDPLFASEKGMIAINKRKGSASNRPEDYAERPHVCTRCSCRFKKVCHLKAHEASHDGIKRFLCHDCGKSFTSKAAMKHHIMVAHTKAGPIFQCTKCNSSYTTKGCLKRHMLSHSSQKSYICPYCERPFSYSSACRQHIKTHAREVINNHERSKRNVKAAVLVTKDDALAGGQTQNVVELVNAVEQQRSLSVINTQNNPFAQPVMAKYAVQVQGVRSQKFISDECHVTSGDQSEKGERLRHSDWLVYVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -