Cdip011215.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cloeon dipterum
Gene Symbol
-
Assembly
GCA_949628265.1
Location
OX451262.1:2151918-2158280[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.028 2 9.1 1.4 1 23 2 25 2 25 0.92
2 40 0.38 27 5.5 0.4 2 23 63 85 62 85 0.96
3 40 1.7e-05 0.0012 19.2 1.1 1 23 96 118 96 118 0.98
4 40 8.2e-06 0.00059 20.2 0.4 1 23 124 146 124 146 0.98
5 40 1.7e-05 0.0012 19.2 0.3 3 23 153 173 151 173 0.96
6 40 0.0051 0.37 11.4 0.4 1 23 182 204 182 204 0.96
7 40 2.3e-05 0.0016 18.8 2.3 1 23 211 233 211 233 0.97
8 40 8.5e-05 0.0061 17.0 3.1 1 23 239 261 239 261 0.98
9 40 2.9 2.1e+02 2.7 0.4 1 23 280 303 280 303 0.92
10 40 2.9 2.1e+02 2.7 0.1 3 10 309 316 308 323 0.86
11 40 0.002 0.15 12.7 1.2 1 23 358 380 358 380 0.98
12 40 0.0005 0.036 14.6 0.6 1 23 386 408 386 408 0.97
13 40 0.0045 0.33 11.6 3.4 1 23 414 436 414 436 0.94
14 40 8.3e-05 0.006 17.0 1.6 2 23 442 463 441 463 0.97
15 40 0.00026 0.019 15.5 0.4 1 23 471 493 471 493 0.97
16 40 0.00025 0.018 15.5 3.5 1 23 499 521 499 521 0.97
17 40 0.65 47 4.8 0.1 2 23 558 580 557 580 0.94
18 40 0.0011 0.082 13.4 2.2 3 23 590 611 588 611 0.96
19 40 0.007 0.5 11.0 3.9 1 23 616 639 616 639 0.95
20 40 3e-05 0.0021 18.4 0.4 1 23 645 667 645 667 0.96
21 40 0.0017 0.12 12.9 1.3 1 23 673 695 673 695 0.97
22 40 2.5e-05 0.0018 18.7 0.2 1 23 701 724 701 724 0.98
23 40 0.0079 0.57 10.8 0.2 1 23 740 762 740 762 0.98
24 40 1.2 85 4.0 2.6 2 23 770 792 770 793 0.95
25 40 0.065 4.7 7.9 0.1 3 23 798 820 797 820 0.89
26 40 0.0033 0.24 12.0 0.7 2 23 847 868 846 868 0.94
27 40 0.82 59 4.5 4.2 1 23 874 897 874 897 0.85
28 40 4e-05 0.0029 18.0 2.6 1 23 906 928 906 928 0.96
29 40 0.0018 0.13 12.8 3.7 1 23 934 956 934 956 0.97
30 40 0.0002 0.014 15.8 2.1 1 23 962 985 962 985 0.96
31 40 7.1e-05 0.0051 17.2 0.3 2 23 994 1015 994 1015 0.97
32 40 0.0003 0.022 15.3 0.9 2 23 1022 1043 1021 1043 0.97
33 40 5.6e-06 0.0004 20.7 0.5 1 23 1049 1071 1049 1071 0.98
34 40 0.033 2.4 8.9 6.3 1 23 1077 1099 1077 1099 0.97
35 40 0.00013 0.0094 16.4 0.5 1 23 1105 1127 1105 1127 0.97
36 40 0.71 51 4.7 0.0 1 23 1299 1322 1299 1322 0.93
37 40 0.00053 0.038 14.5 3.2 3 23 1328 1349 1326 1349 0.94
38 40 2.4 1.7e+02 3.0 0.3 2 21 1398 1417 1397 1418 0.93
39 40 0.032 2.3 8.9 1.5 2 23 1424 1446 1424 1446 0.96
40 40 0.0016 0.11 13.0 0.1 1 21 1456 1476 1456 1477 0.94

Sequence Information

Coding Sequence
ATGTACTCGTGCAAGTATTGCCACGTGCTGTTCGCCACTCGCAGTGAGGTGCACGCGCACGTAGCCGAGAGCCACCCCAAAACGCACGGGTGCATCATCTGCGATTGCCAGTTCCGTACGGCGCAGCTAGCCGCCGAGCACGCTGCTCTCGTGCATCGCGATCGGCCGCGACGGGTGAAGCGGGTGACGTGCGAGCACTGCTTAAGCACCCTCAGCAGCGCACAAGCCTTGGCTCTGCACATTCAGCGCCGACACGAGCCGCGGCCTGGCACCGAGAGCAAGTTGTTCGTCTGCTCGAGCTGCGGAAAGACGTTCGGCCGGCGCTACCAGCTGCTGGAGCACGAGCGGCGGCACACGGGCGAGCGGCCCTTCCAGTGCGTGCAGTGCGGAAGCAGCTTCGCCTCCAGCTCGAACCTGGCCTCGCACATGACGAAGCACCGGCCGCCCAGTCTGGCGTGTCCAGAGTGCGACAAGCGCTTCGGCAGCACCTCGACCCTTCGTGCTCACCGGCAGAGCCACCTCCCCGTCGAGGCGAGACGCACCTTCCAGTGCGAGGTGTGCGGCCGGAGCCTGCTGTCGGCCGCCCACCTCCGCCAGCACAGGCTCGGCCACGACGACGCGGCGCCGTCATTCAAGTGCGCCGAGTGCGGCAAACGCTTCCGCCACCTCAGGTCGCTCAGAGAGCACGTACAGCTTCACTCGGGGGCCAAAAGGCATGTGTGCGAACTTTGCGGTAAAGCGTACGCCATGCGACACAGCCTGACCACCCACAGGCGCACACACGACGCGCCCTTCCGCTGCCAGGTAAAAGCGAGCAAAACTGCGCCAGCCGACACGTACGAGTGCGTCCTATGCAGCCAGCTTTTTAACAAAGTAAAATTGATGCGAGCGCACTTTGAGAGCGAACACCGCGAGAATTTGCTGTGTCCGTATTGCGGCGTCACGTTCCAATTAAACGAGGAATACTACGCGCAGAACGCCATCAGTCGGGTGCTGTTCGCGTGTGACTCGTGCGAAAAGCTGACCAAACTGCCGACCCTGATTCGCAAGCACGAGAGTCCAGAGGAGCGGTACGAGTGCCGCTTCTGCGCGGCCGCGTTCGCCCAGCGCAGCAAGCTGCAGCGGCACAAGAAGCAGCACAACCGAAACTCTGCGTTCATCTGCGCCAGGTGCGGCAAGATGTGCCCGAGCAACCGCGAGCTGGTGGTGCACGAGCGTACGCACACGGGCGAGCGGCCCTTCCCGTGCATTAAGTGCAAGAAGCGTTTCATGTCGGTCAAGCATCTCAACAACCACATGCTCACGCACAACGAAATCTCGTCCGTGTGCGACAAGTGCGGCAAGAGCTTCAAAAACGACAAGTACATGAAGCTGCACCGCCGCATCCACGACCCGTTGCGGCCCATGCCCTACGTGTGCGTCATTTGCAGCAAGGGCTTCTCGCGCCGCCGCAACCTCGACTACCACACGGCCATTCACTCCAACTCGCGAAAGTTCTGCTGCGCGCACTGCGAGAAGCGGTTCAACGTCAAGCCGGGCCTGCTCAAGCACATGCGCATCCACCTCGGCATGAAGTCGCACATTTGCGAAATTTGCGGCCACGCaacCGAGCCTGACGAGCAGGAGAATAGCGACAGCGTGAACGCGTTCTTAGTTTGTAACAAACCGCTGAAATGCCCGTTTTGCGAGGAAGAGTCTGATTCATACAACGCGATGCAAAAGCACACGTCAGTCGTGCACCGCGGGCAGAGGTGCAAAATCACGGCGTGCAGAGACTGCGACCGCAAGTTTAATGACAAGAAAAGGCTGATGATGCACTACAGGCGGTACCACTGGAACGTGCGCTACTCGTGCGACGTCTGCGGCAAGCAATTCCACGGCTGCACCAATCTCTACGCGCACCGAAAGGCCAAACACGAAAACCGATTCGATTTCATTTGCGCTAAATGCGGCAAGGGGTTCTCCACCAGGCGAGAACTGAATTCGCACGAAATCAGGCACACGGGCGTGCGAAACTTTGTGTGCAAAACGTGTGGCAACGCTTTTTACGAAGAGTGCCAGCTGAAGGCGCACATGTCTCTGCACAAAAGAAAAACCGTTTTTACTTGTGAAATCTGTGGCAGGGTCTTAAAATCGCTTGTTAATCTCAAAGGCCACCAAAAAACCGTGCACACCGATTATaaTCACGTTGAATCCATTCACGCCAACTCTCGCAGATTTGTCTGCGATTTATGTGGAAATAGGTACAACACAAAGCAGGTTATTGAAAAGCACATGCTCGTGCACTTCCAAATTAAGCAGTGGAGGCGCTGCGAGTACTGCCACGCGCCGTTTGAAGCGTTCGCCGCGCTGCACGAGCACCTGCTCAAGAGGCACCACGTGAAGATCGCGTGTGACGCGCCGCGCTGCCGGGCCACCTTCCAGACGGCTGAGGCGTTAAAGCGGCACCAGGGCCGCCACAAGGAGGAGGAGCGGGCCAAGCGTAAGGAGAAGGCCGTCAAAGCGGccctccagcagcagcagaagctgGAGGCGCTCACGTGCCGCGTGTGCAACAAAGTGCTGCGCACGGCGTACAAACTGCGGCTGCACCAGTACGAGCACTCGGGCACCTACCCGCACCCGTGTCCGCACTGCGACAAGGCCTTCCTCGAGCGGTGCCGCTTGGCGCACCACGTGCTGATCAACCACGCGGACGAGGAGACGCGCCGGCCGCACGCGTGCAGCTACTGCAACAAACGCTTCAGCGAAAAGTCGTACCTGGCCATTCACGAGCGGCGCCACACGCAGGAGCGGCCCTTCATGTGCGAGCAGTGCGGCAAGCCGTTCACGTGCCGCACCTCGCTCAAGCGGCACCGCGATAGCCACAGCGACACCAAAAAGTACAGGTGCGAGGAGTGCGGAAAGTCTTTCAAGTTCATTACGACGCTGAGCACGCACCGCTACCGCCTGCACCGCAACCCGCGCGCAAAGACTGAGGTGTGCAAGGAGTGCGGCGCCGCCTTCACCACGCGCTACCTGCTGCTGGTGCACTTCAAGACGCACAAGGTGCACCAGCCTCTGGAGTGCGAGCTGTGCGGAAAATTTTTCGGCAACCGCAAGCGGATGGCCACTCACATGAAGACGCATCTGAACATTCGAGCCCACGTTTGCGAGGTGTGCGGCCGCGACTTTGTCGGCTCCAGCACATTAAAGCAGCACATGTTAACGCACACGGGTGCCAGGCCGCACGAGTGCCACGTCTGCCACCTGAGATTTGCCCAAATCACGGCTTTGAAGACTCATTTCAAGCGGCATCCGAACATGCTGCCTTTTAAGTGCGCCGTGTGCGGGTTAACGTTCCGATTAAAGTCTGATTATAACGCGCATTATGATTCACATGCGGCCGACCCTCCTCCGCCAGAGGAGCCGCCGCCTCCAAtcgcacagcagcagcaggctgcTTTTTGCCAGCCGTTTCAAATGGCCAAAATGACGACAGACTTTGGGCTATACGCCCAGCAAGCGCAAGTAGCGCCTGAAATGCAACCACCAAATTGGGCCAGTGAGGAGTTGGAGATAATTTTGCAGCGCCATGTGCAGCCGCGCTCTAGCATGCCCCTCTACCGCTTGCATAACAGACCCGAAATCACCATCTTTCCTGAGGGTTCCGATCCGCCCCCACCGCCTGGCCAATTCTTGCTTCCCGACGAGGAAGTGGCGCCCAAGAAGAATTCGCGATCGACCCGAGCGGTGAGAGGAGAGCCTCTCATGGAGCCACCGGCCGACTTCGTGTTTCCCGAGCCAGAGTGCATTCTCGGTGAGGCGCCCAAGGAAGACAAGAAGGCTTCCACGTCCagaacgccgccgccgccgctggtgACACTGCGCGGCCTACGCATGCAGAAGCGTATCTATGAATGCCAGTACTGCAGCCTCGACTTCCCAGCACTCGATCTGGTCGTCGATCACATCGCCAGAGCGCACCCAGGCGGCTCGAACTGCAAAATCTGCAACGAGAAGTTCTGCAACTCGCGCGGCTTAGAGCAACACATGAAAGACAAACACTGGCGCGAGTAtcaaaaggagaaaaagaaagaagagGCGGGCGGCGTGTCTCCCGAGCCACAGGCCGACGGTGCCGATGAGGACGTTGACTCGGACGGGGTCATCGAGCCGATGGAGGCCTTCACCAGGCTGCCTGACGGGCTGCAGTGCAACGAGTGCATGGTCATTTTTCCCAAGGACTCCAGTTACGCCAGGCACATCTGCAACCCGGCGGCGCCGAACCGCTGCAAGCGCTGCAAACTGAGCTTTGGGACGCATTTAGCACTCGTGCGGCACATCAGCATGGTGCACGGCGCTCAAAACGGCGGCCGCTCCAAGTTCAACTGCAAGGTGTGTGGCGCGGGATTTGCGCACGAAATCAGCTTGCAGAAGCACATCAGCTCGCAAATGTGCAAAGTGTGA
Protein Sequence
MYSCKYCHVLFATRSEVHAHVAESHPKTHGCIICDCQFRTAQLAAEHAALVHRDRPRRVKRVTCEHCLSTLSSAQALALHIQRRHEPRPGTESKLFVCSSCGKTFGRRYQLLEHERRHTGERPFQCVQCGSSFASSSNLASHMTKHRPPSLACPECDKRFGSTSTLRAHRQSHLPVEARRTFQCEVCGRSLLSAAHLRQHRLGHDDAAPSFKCAECGKRFRHLRSLREHVQLHSGAKRHVCELCGKAYAMRHSLTTHRRTHDAPFRCQVKASKTAPADTYECVLCSQLFNKVKLMRAHFESEHRENLLCPYCGVTFQLNEEYYAQNAISRVLFACDSCEKLTKLPTLIRKHESPEERYECRFCAAAFAQRSKLQRHKKQHNRNSAFICARCGKMCPSNRELVVHERTHTGERPFPCIKCKKRFMSVKHLNNHMLTHNEISSVCDKCGKSFKNDKYMKLHRRIHDPLRPMPYVCVICSKGFSRRRNLDYHTAIHSNSRKFCCAHCEKRFNVKPGLLKHMRIHLGMKSHICEICGHATEPDEQENSDSVNAFLVCNKPLKCPFCEEESDSYNAMQKHTSVVHRGQRCKITACRDCDRKFNDKKRLMMHYRRYHWNVRYSCDVCGKQFHGCTNLYAHRKAKHENRFDFICAKCGKGFSTRRELNSHEIRHTGVRNFVCKTCGNAFYEECQLKAHMSLHKRKTVFTCEICGRVLKSLVNLKGHQKTVHTDYNHVESIHANSRRFVCDLCGNRYNTKQVIEKHMLVHFQIKQWRRCEYCHAPFEAFAALHEHLLKRHHVKIACDAPRCRATFQTAEALKRHQGRHKEEERAKRKEKAVKAALQQQQKLEALTCRVCNKVLRTAYKLRLHQYEHSGTYPHPCPHCDKAFLERCRLAHHVLINHADEETRRPHACSYCNKRFSEKSYLAIHERRHTQERPFMCEQCGKPFTCRTSLKRHRDSHSDTKKYRCEECGKSFKFITTLSTHRYRLHRNPRAKTEVCKECGAAFTTRYLLLVHFKTHKVHQPLECELCGKFFGNRKRMATHMKTHLNIRAHVCEVCGRDFVGSSTLKQHMLTHTGARPHECHVCHLRFAQITALKTHFKRHPNMLPFKCAVCGLTFRLKSDYNAHYDSHAADPPPPEEPPPPIAQQQQAAFCQPFQMAKMTTDFGLYAQQAQVAPEMQPPNWASEELEIILQRHVQPRSSMPLYRLHNRPEITIFPEGSDPPPPPGQFLLPDEEVAPKKNSRSTRAVRGEPLMEPPADFVFPEPECILGEAPKEDKKASTSRTPPPPLVTLRGLRMQKRIYECQYCSLDFPALDLVVDHIARAHPGGSNCKICNEKFCNSRGLEQHMKDKHWREYQKEKKKEEAGGVSPEPQADGADEDVDSDGVIEPMEAFTRLPDGLQCNECMVIFPKDSSYARHICNPAAPNRCKRCKLSFGTHLALVRHISMVHGAQNGGRSKFNCKVCGAGFAHEISLQKHISSQMCKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-