Cdip011227.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cloeon dipterum
Gene Symbol
Znf711
Assembly
GCA_949628265.1
Location
OX451262.1:2195165-2202503[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 5.1e-06 0.00037 20.8 1.9 1 23 44 66 44 66 0.98
2 40 0.01 0.75 10.4 1.3 1 23 71 94 71 94 0.98
3 40 4.7e-05 0.0034 17.8 0.5 1 23 100 122 100 122 0.98
4 40 0.00016 0.011 16.2 1.6 1 23 128 150 128 150 0.98
5 40 2.3e-06 0.00016 21.9 0.2 1 23 157 179 157 179 0.97
6 40 0.0066 0.47 11.1 4.4 2 23 187 208 187 208 0.98
7 40 4.3e-05 0.0031 17.9 3.7 3 23 216 237 214 237 0.94
8 40 1.9e-06 0.00014 22.2 1.6 2 23 245 266 244 266 0.97
9 40 0.00039 0.028 14.9 0.1 3 20 274 291 273 295 0.94
10 40 0.0025 0.18 12.4 0.1 1 22 300 321 300 323 0.91
11 40 6.8e-06 0.00049 20.5 2.8 1 23 337 360 337 360 0.97
12 40 0.11 8.2 7.2 3.1 1 23 371 393 371 393 0.96
13 40 1.4e-05 0.00099 19.5 1.9 1 23 481 503 481 503 0.97
14 40 1.4e-07 9.8e-06 25.8 1.9 1 23 509 531 509 531 0.98
15 40 0.00029 0.021 15.3 0.8 1 23 538 560 538 560 0.98
16 40 2.3e-05 0.0016 18.8 3.0 2 23 568 589 568 589 0.98
17 40 2.6e-05 0.0019 18.6 0.7 2 23 596 617 595 617 0.97
18 40 2.2e-06 0.00016 22.0 0.2 1 23 623 645 623 645 0.98
19 40 0.00059 0.042 14.4 2.6 1 20 651 670 651 672 0.97
20 40 0.0018 0.13 12.8 1.6 2 23 781 802 781 802 0.96
21 40 2.1e-07 1.5e-05 25.2 3.0 1 23 808 830 808 830 0.96
22 40 0.0041 0.29 11.7 1.5 1 23 837 859 837 859 0.98
23 40 0.017 1.2 9.8 2.9 2 23 867 888 867 888 0.98
24 40 3e-05 0.0021 18.4 1.9 2 23 895 916 894 916 0.96
25 40 3.2e-06 0.00023 21.5 0.4 2 23 922 943 921 943 0.98
26 40 0.00023 0.016 15.7 3.6 1 20 949 968 949 972 0.94
27 40 0.032 2.3 8.9 0.7 1 19 977 995 977 998 0.94
28 40 0.2 14 6.4 2.7 1 23 1014 1037 1014 1037 0.93
29 40 0.00036 0.026 15.0 1.8 2 23 1048 1069 1047 1069 0.96
30 40 7.3 5.2e+02 1.5 1.5 1 23 1127 1150 1127 1150 0.94
31 40 1.1e-05 0.00079 19.8 1.2 1 23 1164 1186 1164 1186 0.97
32 40 0.00083 0.06 13.9 3.7 1 23 1192 1214 1192 1214 0.95
33 40 0.00085 0.061 13.9 0.2 1 23 1221 1243 1221 1243 0.98
34 40 0.007 0.5 11.0 5.1 2 23 1251 1272 1250 1272 0.98
35 40 0.0004 0.029 14.9 3.1 1 23 1278 1300 1278 1300 0.98
36 40 3.3e-06 0.00024 21.4 1.4 1 23 1305 1327 1305 1327 0.98
37 40 0.00094 0.068 13.7 0.5 1 20 1333 1352 1333 1354 0.97
38 40 0.0055 0.39 11.3 0.6 1 23 1361 1384 1361 1384 0.98
39 40 0.47 33 5.2 1.5 2 23 1399 1421 1398 1421 0.95
40 40 6.6e-05 0.0047 17.4 0.6 2 23 1439 1460 1438 1460 0.96

Sequence Information

Coding Sequence
atgaaaaaaacaggCAGATCTGAGCAACGCACCCATTTTTTCAGGTGGAGGAAATCTCCCCGCGCTGAGCAGAGCAACCTTGAATCACTCACTCAGCACTCGGTGGGCCGAAGACGCCGGAAAACCTCCTTCGAGTGCCACTTCTGCAACGAAGGGTTCAAGCGGAAAAACGCCCTTCAGGTGCACATGCGAGCCCACCTGAGAGTCCTCTTCCAATGCCACCTTTGCCAGGTGGGGCTGCCGTCGCGCGGCCACGTCCGCGCCCACCTGCGTAGGGAGCACCAGGTGCACGACCTGTACCCGTGCACCATGTGCAGCCGCAAGTATCGCAGCAAAGCCGCGCTGGAAATCCACCTGCGCAACCACACCGGCGAGCGACCCTTCATCTGCCCCACCTGCGGCAAAGGGTACATCTCGTTCCACACGCTGAAGGAGCACCAGACGACCCACAGGGAACGCGATAAGACCTTCATATGCGAGGTGTGCGGAAAAGGCTTCCCGAAAAACGCGAACTTGAAAAACCACAGAAAAATTCACTTCGAGGAGGCTCGGACGGAGAAGTGCGAGATCTGTGGCTGGAGCACGTACTGCAAGTACCACCTGAAGAGCCACATGCTGACGCACACGAGGGAGAAGACGGTCATCTGCCACGAGTGCGGCCAGAGTTTCATCCACCAGGCCAGTCTGCGCCACCACATGTCCCTGAAGCACAACCCCGACCGGCCACCGGACAAGTGCGGCCTGTGCGGCAAGGTGTGCAGCTCGGCCTTCAACCTGCGGAGGCACATGCTGACCCACTCGGGCATGAAGGACGTCGCCTGCGAGATTTGCGGCAACACGTTTGCGCAGAAGTCGACGCTGATCAGCCACATGTGGATCATGCACAAGGCCCTGCCGTACAAGTGCGCCGAGTGCGACGAGCAGTTCCGGCTGCAGATCGAACTCAAGCAGCACCGCGTCGCCGCGCATTTGAATAACGAGGAGCACGCCCGCCCTGACAAGGAACCCTACCGCTGCGAGGACTGTGGAAGGAGTTTCATCCACGAGACCAGCCTGAAGCACCACCAGGCCAAGGCGCACAACAAGTACAAAAACCTGCAGCGCCAGCAGCACATTTGCGACTTTTGCGGCAGGGAGTGTCTGTCCGCCTTCAACCTGAGGAGGCACGTCGAAAAGCACCTGCGCCAGGAGGCAAAGCAGaagaATCTGAGCAAACACACCTGTGCTTTCAGATGCAAAGAACAGGACGGCGGAAAAGACTTGGACATGGAGCGCCTCCGCTATAACTTAAGGACCGTCCTGCAAACGGACgagaaaaaacaattgaatGTTTTCTACGAGTGCACGCATTGCCTGTTTCGCGATCCATCTCTCGCCTCGGTCTGCGCCCACGTGCTCGAGGAGCACAATGAAAGACTACTCAAAAACGTGGAACAGGAGCATCCATGCACCGTTTGCGAGCGCATATTTAGCTCCAAGACAAAACTGCAGGTCCACATGCGCAACCACACCGTTGAGAGACCCTTCATCTGCTCCACCTGCGGCAAATCTTTCAGAACAAAAGAATTGCTGAAAAGTCACATGAAGATGCACGAGGATCGCGTCAATTGGTTCACCTGCGAGGTGTGCGGGAAGCATTTTCCCCTGATTAGTCGCCTGAAGGCTCACAGAAATATCCACTTTCCGGAGTCTCGCACGGAGAAGTGCGATATCTGCAGCTTTAGTACCTACCGCAAATCGCAACTGAAAAATCACATGCGGACGCACACCAGGGAGAAGACGGTGACCTGCAAAGAATGCGGACAAAGTTTCGTCCACGCTTCCGGTCTGCTCGCTCACAAGCAGAAGCACACAGCACCCTTTTCACACAAGTGCAACATTTGCGGTAAGGCTTTCGGCCAAGCCTTCAATCTGTGGATGCACATGGCAATCCACACAGGCAAGAAGGAATTCGAATGTGACATTTGCCACAAATTTTTCACGCAGAGCTGCACCCTGATCCAACACCAGTGGCTGGAGCACAATAAGTTTCAAATGATCAAGGCATACAAGCAGGTCAAGGAGGACCGAAAAATTCAGACGCTCATTTGCAGATCTGAGAGCAAACACACCTGTGCTTTCAGATGCAAGGAACAGGGCGCTCTAAAAGGCTTGGACAAGGAGAACCTCCGCTCCAATTTGAAGACCGTCCTGCAAACAGACGAGAAAAAACGATTGAAAGTTTTCTACGAGTGCGCGCATTGCCTGGACCGCTTTCCAACTTTCGGCTCGGGCTGCGCCCACATGCACAAGGAGCACAATGAAAGACCATTCAAAAACGTGGAAGAGatagagaaaaattcatgcaATATTTGCGACCGCGAATTTAGCTGCGAGTCAAAACTGGAGGTCCACATGCGCGACCACACTGGGGAGAAACCCTTTCTCTGCTCCACCTGCGGCAAAtctttcaaaagaaaagacaCGCTGAAAACTCACATGCAGACGCACGAGGATCGCGTCAATTGGTTCAAATGCGAGTTGTGTGAGAAGCTTTTTCCCACGATACATCGCCTGAAGGCTCACAGAAACATCCACTTTCCGGAATCTCTCACGGAGAAGTGCGATCTCTGCGGCTGGAGTACCGACTGCCAATCGAAACTGAAATATCACATGCGATCGCACAGCAAGGAGAAGACGTTGAGCTGCGACGTATGCGGGGAAAGCTTTCGCCACAATTCCGGTCTCTTTAATCACAAGCAGAAACACAAACCCCCTTCACAAAAGTGCGACATTTGCGGAATGGCTTTCATCTTTTCGTTTAACCTGCGGAGGCACATGGCAACCCACACAGGCAAGAAGGAATTCGAATGTGACATTTGCCACAAATGTTTCGCGGATAAAACCACCCTGATCAACCACCAGTGGCGGAAGCACAATAATCTGCCGTACAAGTGTGACGAGTGCGACGAGCAGTTTCATCTGAGTGTCGAGCTGGAGCAGCACAGTATGCATCTTACAATTAAGAAACAGGTCGACGATATCTCTGACAAGGATCCTTTCTCCTGCCAAGACTGCGACAGGAGTTTCCTCCACGTAAGGAGCCTAAAGTTTCACATGCTCAAGGTGCACAACAAAGGAGGCCGAAAACCTAGCAAGCTCATTTGTGACTTCTGCAACAAAATCTATTCGGCTCCCTTTCACCTTAGGAAGCACATCAAAAAGCACCTGCAAGTGGAGGAGAAGAATCATTTGATTAAATCGGCAGATCTGAGCAAACACACCTGTGCTTTCAGATGCAACGAACAGGGCGGCGGAAAAGACTTGGACAAGGAGCGCCTCCGCTCCAACTTGAGGACCGTCCTGCTAACGGACGAGAAAAAACGATTGAAAGTTTTCTACGAGTGCGCGCATTGCCTGTTTCGCCTCCCATCTTTCGCCTCGGTCTGCACCCACATGCTTGAGGAGCACAATGAAAGACCATTCAACCTTAAGGAAGACAAACAGGAGCATCCATGCACCGTTTGCGGGCGCAAATTTAGCTCCGAGACAAAACTGGAGGAACACATGCGCGACCACACTGGTGTGAGACCCTTCCTCTGCCCCACCTGCGGCaaatctttcaaaacaaaagacaTACTGAAATGCCACATGAAGACGCACGAGGAGCGCGTCAATGCGTTCACGTGCGAGGTGTGCGGCAAGCTTTTTCCCATGATAAGTCGCCTGAAGGCTCACAGGAACATCCACTTTCCTGAGTCACGCACGAAGAAGTGTGATATCTGCGGCTTTAGTACCTACTGCAAATCGAAACTGAAAAATCACATGCGAACGCACACCAGGGAGAAGACGTTTAGCTGCGACGAATGCGGAAAAAGCTTTCTCCACAATTCCGGTCTCTTTAATCACAAGCAGAAACACAAACGCTTTTCACACAAGTGCTTCATTTGCGGAAGGGCTTTCAGCATTGCGTTTAACCTGCGGAGGCACATGGCAACCCACACAGGCAAGAAGGATTTCGAATGTGACATTTGCCACAATTTTTTCGCGCAGAAAAGCACCCTGATCCAACACCAGTGGCTGAAGCACAATAATCTGCCGTACAAGTGTGGCAAGTGCGACGAGCAGTTTCAGCTGAATCTCGAGCTCAAGCAGCACAGGATTACCGTGCATCTTAAGAAACAGGTCGACGATATCCCTGACAAGGAACCTGTCCCCTGCCAGGAATGCAACAGGAGTTTATTCCACGAGAGGAGCCTCAAGTTTCACATGCTCAAGGCGCACAACAAGGAGGTCAAAGGAGTTCGAAAAACTCAGAAGAAGTCTCAGAAGCTCATTTGTGACTTCTGCAACAAAGTCTATGCGGTTCCCTATCACCTGAGGAAGCACATCGAAAAGCACCTGCAAGTGGAGGTGGAGAAAAAGAATTTGACtaaaccataa
Protein Sequence
MKKTGRSEQRTHFFRWRKSPRAEQSNLESLTQHSVGRRRRKTSFECHFCNEGFKRKNALQVHMRAHLRVLFQCHLCQVGLPSRGHVRAHLRREHQVHDLYPCTMCSRKYRSKAALEIHLRNHTGERPFICPTCGKGYISFHTLKEHQTTHRERDKTFICEVCGKGFPKNANLKNHRKIHFEEARTEKCEICGWSTYCKYHLKSHMLTHTREKTVICHECGQSFIHQASLRHHMSLKHNPDRPPDKCGLCGKVCSSAFNLRRHMLTHSGMKDVACEICGNTFAQKSTLISHMWIMHKALPYKCAECDEQFRLQIELKQHRVAAHLNNEEHARPDKEPYRCEDCGRSFIHETSLKHHQAKAHNKYKNLQRQQHICDFCGRECLSAFNLRRHVEKHLRQEAKQKNLSKHTCAFRCKEQDGGKDLDMERLRYNLRTVLQTDEKKQLNVFYECTHCLFRDPSLASVCAHVLEEHNERLLKNVEQEHPCTVCERIFSSKTKLQVHMRNHTVERPFICSTCGKSFRTKELLKSHMKMHEDRVNWFTCEVCGKHFPLISRLKAHRNIHFPESRTEKCDICSFSTYRKSQLKNHMRTHTREKTVTCKECGQSFVHASGLLAHKQKHTAPFSHKCNICGKAFGQAFNLWMHMAIHTGKKEFECDICHKFFTQSCTLIQHQWLEHNKFQMIKAYKQVKEDRKIQTLICRSESKHTCAFRCKEQGALKGLDKENLRSNLKTVLQTDEKKRLKVFYECAHCLDRFPTFGSGCAHMHKEHNERPFKNVEEIEKNSCNICDREFSCESKLEVHMRDHTGEKPFLCSTCGKSFKRKDTLKTHMQTHEDRVNWFKCELCEKLFPTIHRLKAHRNIHFPESLTEKCDLCGWSTDCQSKLKYHMRSHSKEKTLSCDVCGESFRHNSGLFNHKQKHKPPSQKCDICGMAFIFSFNLRRHMATHTGKKEFECDICHKCFADKTTLINHQWRKHNNLPYKCDECDEQFHLSVELEQHSMHLTIKKQVDDISDKDPFSCQDCDRSFLHVRSLKFHMLKVHNKGGRKPSKLICDFCNKIYSAPFHLRKHIKKHLQVEEKNHLIKSADLSKHTCAFRCNEQGGGKDLDKERLRSNLRTVLLTDEKKRLKVFYECAHCLFRLPSFASVCTHMLEEHNERPFNLKEDKQEHPCTVCGRKFSSETKLEEHMRDHTGVRPFLCPTCGKSFKTKDILKCHMKTHEERVNAFTCEVCGKLFPMISRLKAHRNIHFPESRTKKCDICGFSTYCKSKLKNHMRTHTREKTFSCDECGKSFLHNSGLFNHKQKHKRFSHKCFICGRAFSIAFNLRRHMATHTGKKDFECDICHNFFAQKSTLIQHQWLKHNNLPYKCGKCDEQFQLNLELKQHRITVHLKKQVDDIPDKEPVPCQECNRSLFHERSLKFHMLKAHNKEVKGVRKTQKKSQKLICDFCNKVYAVPYHLRKHIEKHLQVEVEKKNLTKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-