Cdip013721.1
Basic Information
- Insect
- Cloeon dipterum
- Gene Symbol
- -
- Assembly
- GCA_949628265.1
- Location
- OX451262.1:30791473-30796275[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.59 8.5e+02 0.1 0.0 19 29 18 28 11 39 0.80 2 10 0.00031 0.44 10.7 0.7 12 44 134 160 126 160 0.83 3 10 9.9e-09 1.4e-05 25.0 2.8 8 44 189 224 187 224 0.89 4 10 0.11 1.5e+02 2.5 3.5 14 43 258 284 247 285 0.78 5 10 1.8 2.5e+03 -1.4 1.8 16 38 288 312 286 318 0.80 6 10 5.1 7.3e+03 -2.8 0.1 14 24 312 322 309 324 0.81 7 10 0.059 84 3.4 2.3 15 43 361 386 353 387 0.84 8 10 0.034 49 4.1 6.1 1 43 376 415 376 416 0.91 9 10 7.5 1.1e+04 -3.4 0.8 17 29 420 432 418 455 0.58 10 10 1.7 2.4e+03 -1.3 6.0 7 43 482 515 480 516 0.78
Sequence Information
- Coding Sequence
- ATGCAGCAGCCGAGAGTGAGAGAAGGAAAAACTCCGattcaaaagccgctgtgcagactgtgcgagtgtccgacgtcggacggccacgtcctcgcgtcgcaggtggacaggctcaagctgaggaaatgggccatggaggtcatgaacctgacggaagaagacgaaaacttgccggacgtggtcgaagaagacgctttgatctgctatttttgcatctggcaggcagaGTTCGGGGATGAGTCCGGAGATGAAGCTGTtgcttggtggccgaaaaatcttgatttggaTGAAAACGCTAGGGTTCTGCGTGAGAATTATTCAAttggaGATGTGgaacagtgttgggtgcagttggaagagATTGATCTGCCCGAATACGAAAAGGAAATCCCCGAGGAGAGGAAATGCGACAGTGCAGTTTGTCTTTACTGCGGCAATAGTTACAACCGACTGATGGAACACGTCAAACTGATGCACAAAGAAGCAATCAAATGCGGAATTCGGGGCTGCACGACTTACTTTCAcaccgaggaggaaaaagagcagcaaatGCAGCACGACTTTCACGCGAACCAATGCGAAAGCAGGAAAATTCGttgtaaatattgtgaaaCCGTCCTTTTTCTTTCCTCGTCGAGTAATTTGAAGAAGCACATGTTTCGCAAGCATCCGGAATTTCCGGTGTTGTGCACGCGTCCAGGCTGCAACGAGTACTTCAAAACCAAGTCCGAAATGATCCTCCACTTCAATTCGCACAAACGAGCCATAAATCAAGATCTTTACCAATGCAAGCACTGTGAGTATTTCACCACGAAGATGTCCACTTTGAGTCGACACGTAGAGGGGAGGCACATGCCAAAGGTCTTCAAATGTAGCAGTTGCAACGCTAAATTCGGCTCGAAAGTGTTAGTGAATGTGCACAACCAACAATATCACACTTTTGACAAGTGCAAATCTTGTGGCCAGGACGTGGCTCCCGGGATCATAGCACGCCACAGAAGACAACGTGTTTGCCCCAAATGCAAACTGAGATTCAAGTGCTTGGGTTTGTATCAATTGCATAAGAAGAGCTGCAAACAAACACCATATAGTTGCAAGGAGTGTGGAAAATCTTTCAACAAGTCTTCTAAGTTGTATATCCACTTGAAAAAGGTTCACACCGAAACCGCGATTGTTCACTGCGAGCATTGCGACTTTTCTACATATGCCAAGACTAGATTGAGTGTCCACTTGCAACGCAAACATTTGCCAAAGACGATCAAGTGTGATGAGTGCGACAAATTGTTCGCATCTGAATCATTTCTCAAGGATCACAAACAGAGGTGGCACAAATACGTTCGTTGTGCGGAATGTGCTCAGGAGATGTGCACTCAAACCATGTCTAAACATCGGACCGTCAAGATTTGCCGCTGCTGCAAGTGCAAGTTGAAGTGCTCAGGACTTTTTCAAAAGCATAAGAAGAGCTGCAAATCAACCGGTTGCAAAGAGTGTGGAAAAACGTTCAACATGAGTTGGAAGTTGAATTTACACATGCATAGAGTTCACAACAAAGCCATTCTGCACGCGGCAGAATACGGTGATTTGGAGGTATGCAAGGAACTCTTGGAGCAAGGCGAAGACGTCAACGCCACGGACGTATTTGGCTACGACGTCTATCATTTCGCCTCTATGAATGAAACCTGCGGCTTGGAACTGATCGATTTGTTTGCGGCCCACGGTGCcataatgaaaagaaaaagctgGCAAGCAGACCTTGATGCAGTCGAGCTCGCTTTGAGCGAAAATAATAACGTAGAGTTTGCGATCaagcttttcaatttatacaAATCACCGGCGAGCTTTCTTTCGTGCTACCTGCGTCAAAGTGATGACTTGGAATTGATGAAGTTGGCTTTTGAGAAGGACCCGTCTGTAGCCAAAGTAAAGGGCGAAGACGGATTCGACAAGACTATTTCGTGCAACGTGGCGCGGAAGTTAAATCTGGACGTATTCGAGTGGATTCTTGAAGTCATCATCACTACCGAAgaagatttattttacgaGAAGAAGTGGCAACTTGACATTCTCAAGTATTCTGCCTTCAACAAGCTGCACGGTGGGGATATCGCCaactgcattttttctttgctcatCAGTAATTTGACGAGAGAAGATTTGACGCCTCTCCTCGTTACTGTCGTGTCGTCTAGGATGCCTGAAGATGTGAACATGAACGTTGTTGGACTACTAGTTGAAAATGGTGCCTACGTGAATGCAAGAATTAATGGCAAATCCCTCCTTGATCACTTCGTGGCTTCGAATTCATTATCGGCCGCCCAAGATGTGTACAAATGGAGCCGAAAGGAGATTTGCGCGAGCACCTTGCATTACGCCGCAGCGAAAGCGGATGTCGAAATGTGCGAGTGGCTCGTTGGACGTCCCATGGCTGCCAacatgggaaataaaataccaGTTTTCCTGCACAGCGTTACAGAGAACCACAAACACGGAGCCAATCTCATTCGTCGCTTTGATCGAATTCTGCGTGATTATGTAAATGTTGCCTCTGGAAGAGAGCCAGATGATCTAAAGACTCCACTCCAATCGGCCATGTATAACAGAAACCTCGGAGTTGCAGAAGCTTTGCTAGAAATAGGCGCCGATTTGAACGTGAAATATAATACCTATAATTTGTTAATGTACTGCCTGTGGAACAATTTTCTGGACGGCGCCAAGCTTGTGTATGCCAGAGACAGGAGCCAGCTTGGACCAATAATCCTTTGGCGCCGTGGGCATTCGACCGTCGAGACATTCATCCCGCACGCATTGTGCCCCGATGTCAGGTGGCGCGACTGGCAATGA
- Protein Sequence
- MQQPRVREGKTPIQKPLCRLCECPTSDGHVLASQVDRLKLRKWAMEVMNLTEEDENLPDVVEEDALICYFCIWQAEFGDESGDEAVAWWPKNLDLDENARVLRENYSIGDVEQCWVQLEEIDLPEYEKEIPEERKCDSAVCLYCGNSYNRLMEHVKLMHKEAIKCGIRGCTTYFHTEEEKEQQMQHDFHANQCESRKIRCKYCETVLFLSSSSNLKKHMFRKHPEFPVLCTRPGCNEYFKTKSEMILHFNSHKRAINQDLYQCKHCEYFTTKMSTLSRHVEGRHMPKVFKCSSCNAKFGSKVLVNVHNQQYHTFDKCKSCGQDVAPGIIARHRRQRVCPKCKLRFKCLGLYQLHKKSCKQTPYSCKECGKSFNKSSKLYIHLKKVHTETAIVHCEHCDFSTYAKTRLSVHLQRKHLPKTIKCDECDKLFASESFLKDHKQRWHKYVRCAECAQEMCTQTMSKHRTVKICRCCKCKLKCSGLFQKHKKSCKSTGCKECGKTFNMSWKLNLHMHRVHNKAILHAAEYGDLEVCKELLEQGEDVNATDVFGYDVYHFASMNETCGLELIDLFAAHGAIMKRKSWQADLDAVELALSENNNVEFAIKLFNLYKSPASFLSCYLRQSDDLELMKLAFEKDPSVAKVKGEDGFDKTISCNVARKLNLDVFEWILEVIITTEEDLFYEKKWQLDILKYSAFNKLHGGDIANCIFSLLISNLTREDLTPLLVTVVSSRMPEDVNMNVVGLLVENGAYVNARINGKSLLDHFVASNSLSAAQDVYKWSRKEICASTLHYAAAKADVEMCEWLVGRPMAANMGNKIPVFLHSVTENHKHGANLIRRFDRILRDYVNVASGREPDDLKTPLQSAMYNRNLGVAEALLEIGADLNVKYNTYNLLMYCLWNNFLDGAKLVYARDRSQLGPIILWRRGHSTVETFIPHALCPDVRWRDWQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -