Cdip012851.1
Basic Information
- Insect
- Cloeon dipterum
- Gene Symbol
- bab1
- Assembly
- GCA_949628265.1
- Location
- OX451262.1:21649920-21675456[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-08 5.6e-05 22.8 0.0 3 40 177 214 175 217 0.92 2 2 0.43 8.1e+02 -0.1 0.0 5 21 955 971 953 971 0.90
Sequence Information
- Coding Sequence
- ATGGACAACGAGACGAAGTTGTACATGAAGCGGATGCTGCTGAGCGGCGACGCCGTGGTCACGCAGTTCAAGGGCGGGGGTGGCGGCAGCATGGTCAGCGACGTGTGGAAGAAATTCGGCCGGATTGCCATACGAGCCACGGGCAACCTGGTGGTAGGTGTGGTGGCCTGCAGCCTCTGCTTCAAGGTCTACTCGTACAAAGACAGCTCGCAGGGCACCAGCACCCTCCGCCTGCACGTATGCGGCAACGACGACGCACCCGTCCGAAAAGTCCGCAAGTCAGGAGGTACGGATAAGCCATCGTATATGAACCAAGCCACGCCGTTTGTTGGAGGGCCTGCTGGCGAACGTGCAAAACATCAGCTGCCCATTGCGGATCGTTCCATTTTACTGCTGGTTGGAGTCGGCAGTCGCGTAGTGCGCGTCAGACAGGCTGCCAGTGAGACTGTTTATATTAGCATGTCTCAGCACTACGTGCTGACCAAAAAGTCGACCAGGATGGGTCGCGTGCGTCGCAACTACAGCCGCAAGGACATGGAGGACGCGGTCAGGGCTGTACAGGAGAGGAGGATGAACCTCAACTCGGCCGCCAATTATTTCTGCATCCCCAAATCCACCCTCCATTACGTCGTGACGGGCAAGTCGAAGATGGACTTCAACCGACCGCCGTTTATCATGTCCAAGGGCCAGGAGAATGAATTAGTTCGCGTGTTGGCAAGCATGACCTACGAGGGGGTTGTTTTCAACTTCAATAACATCGAGGAAGTAGTCGAGCGCCGCCTCTCGGGAAACAAAAACCCCTTCGCGCACGGCCGGCCGGGCCGCTCGTGGTGGAACGACTTTCGACTCCGGCACCCAGAAATCGAGTTCGTTTTTCACGCGTTCGCTCCCAAAGATACTCCAGGCTCGGCCGAGGCGTCATGGCCGGCGGTAAACAGCCCCCAGGTGGTGCAGCGGCTCAAGTCTGGCGATCTCCTCAACGCGCCGCAGTCGATGACCCAGCGCGAAATCAAACCAATCCTGCCGAAGCCGTCGacgtcggcggcggccgccaTGAGCCCGCCGTACCAGGACTCGTCGCAGCCGGCTCCGCAGGCGCGACCTCTACAGCCGAAGCAAACGCCAAAGGCCGCACCGAAACCAaagtcgagcgccgccgcgtCCCAGCCGCGCTCGGACAACGACGACTCGGAGCCGCAGCAGGTGTGCCTCCGCTGGAACTCATTCCACTCCAACATGGAGACCATGTTCCCTACGCTTTTGTACAAGGAGAAGTTTGTGGATGTCACCCTTGCCTGCGAAGGACGGCTCATAAAATGTCACAAGGTTGTGCTTTCGTCATGTAGTCCTTACTTAGAACGCCTGCTCAGCGACAATCCATGCAAACACCCCATCGTGTTGATGCCAAAAGATGTTCCTTACTGGGCCCTGCGAGCCATCGTCGATTTCATGTACCGCGGCGAGGTCAACGTGGAGCACGAGCAGTTGGCGCCGTTGCTGGCCGCCGCCGAGTCATTGCAAATCAAAGGTTTGGCCGGATCTCCAGGAGACGCGGGGAGCAGAAAAGACGGAAGGCCAGGCGTGAAGAGAAAGCGGATAGAGTCACCAGCGCAGACGAACCAACAGCCTAAACCGCCCCAGCCGACCCCTCAAAACAACACGTCCTCCCAACAGTCTACCTCAAGTCCAGCGACCGCGACTGCCCAGTCATCATCAAAAAAAGAGGCGAAAGAATCTCCATCTCAGAAACATACCCAAATGGCACCGCACATCGCCGAGAGTCTGCGAGGCCTGTCCCCAGGCATTGAAATCACGCCACTTGTGTCATTTGAGGAGATTAAAACGGAACCCATAGACAGTAATGACGATGGATCTCTCGAACCCCCTGACGATTATGGAATAGGAAAAGTTTCACCGTTCAAAGGCTATGACGACGGAGACGAATCTTTACCAGTCAGTCACGTTGAGAGCTTAATGGAAGAAGAAGACATGGGCGACGAAAGCGATACACTCAATGACCATTCCCAAATACCCGATCCAAACGACTTGCTATCAACTGAAATGGAACCAATTGAagaagAAGACGATTCAGCAAATGTGTACAGTGAAAATGGCATGGACTTCCCCGATTGTGGCCTTTCTGAAGAAGCTTCAGACCTGGTCGAGTCGTATGCTGAAGTGTGCATGCCAAGCACCATAGATAATGTCAGCCTAGCGAGCATATCAGAAGATATAAATTTCGAAACCAAACTGAAGGTTTTGGATGCTGTCCTGCCGACAGCTGCCAAAGAAAAGCCATCTAAATATAGGATAGAAAATGGAGTGTACTTTTGCGACTTGTGCGACGCAAACTTTGTCGATCTCGAAAACTGCACAAGCCACGTCAAAGAGCACTCAAAGAAAAGCGCCTACCTGTGTCCAACTTGTAACTTACCTTGCAAAAGCCACATTGATCTTGTCAAGCATTGCAAAGAGACGCATAAAGAGGACGGACTGTTTCGTTGCGGCAAGTGTTCGCTCGTGTTTGGGCGTCAGACTCAGCTGAAATACCATGAGAGACGAGTGCATCTGCAAGAAAGAAGCCAGGTCTGCCAGTTCTGTGGGAAGGGATTTTTCAAGCGATGTGATCTGAAAATGCACCTCAACATTCACCTTGGAATCATGAAAAACATATGCGTAAAGCCGTATGTTTGCTGCACCTGTGGTGTGAGGTTCAACCAAGTCAGCGCTTTGAAAAACCACATATCGCACCGGCACCCTGTCGGCAACAAGAAAGACGGCTACCCTTGCCCGAGTTGCGGCAAAATCATGACCACCATCGCTGTACTGAAGAAACACCTGAAACTAGTACACAAATCAAGTCTGGACAGTGCCGTTAATAAAATTCAGAGCAAAGAGACCAGTAGTCGTAAATTCTACTGCAAAATCTGCGGGCTTAATTTCAACAACCAGTCTGCGCTGCATGACCATGAGAAGGAAACTCACGCGAGCGCAGAGGAGTTTTCCTGCAAGAGCTGCAACCAGaaattcaAATCGATCGGGGACATAAAGACGCACTGCTGTGTCAGTCCAATTGGTGACACCACAAGATTGATGGTCAAGCAGCTCCTGGATATGCAGACTGATGATTTTtctgaagaagaagaaaactTGGTCAGTGAGGAAGTGATATGCAATGAAACGGTGCCTCCGAATGAACCTGTGGAAGAAGTTATTTCCACGCCGACAAACGATGGAAGTGCGATGCGGGAAATGGTTTTCCACGTGCAAGCCGAGGGTCACAGCGAACTGATGGCTGTCCACGTCAAATACGACATGAACTACATTATTCCTACAGAAAATCAAGACGTGAAACGTGCCGAGACAAATATCGTGAAACCCGTCGCTCcggaaatagttaaaaatgaaattccaaaaatagcTGAGATCCCCAAGCCACCCGAGAAGGAGGCGCCGCAGACCAAGAAATTCGCGTGTGGTGACTGCGGGAAGAGTTTTTCCAAAAAGCACAATTATAAGCAGCATTTAgCAACTCACAACATTGAACTGAAAAAGTACGTGTGCAAAATCTGCAACCAGGTGTACGCGTGGAAATCGTCCTTAAATAAGCACGTGCTGATGAACCACACTGAAAAGTCGAGCACCTACTTATGCAACCTTTGTCCAAAGAGTTTCAACCGAAGTCAAGCCTTCTCTGAACATGTTCGTCGTGACCACATAGGAGAAAAGCCTCACAAATGCGCACAATGTGGAAAGGcgttctttaaaaaaagcgaCTTAACCGTTCACACCAGAATTCATTCCAATGACAAGCCATACATTTGCGGGACCTGCGGCAAAACCTTTTCCCACGTTTCTCATATAATCAGGCATGAGCGCATCCACTCAGGGGTCAGACCGTACAGTTGCGATGTTTGCGGCAAGGCGTTTGCCCAGTCGACCGCCTTGCAAATTGCGCCGCCACCCGCTCCGTGGCCTGCGAAGGCGGTCCGCTGGCTGCGCCTTAGGAGCACCCGACGCCCCGCTGTCGCGGGCTCCGCTTCAATGTCCGCGCAAGTCTTTGGTCAAAACACGAGaAAGGTGTACTCGGTGTGGTATGGCCGAGTGGGAACGACCAACTCAATCACGTCCGACCAGGTTCAGCAAGTCTTCAACGATATGGATCTCTACCCTTCCAAGTCGCAGGTTTACGAGATGCTGCAGTGCGCGAAGGAGTGCGCCAACCGCAGCACGGCAGCTTACCTCACGTTCGGCGAGTTCTGCGTATTCGCCACCGAACTCAAGCGCTGCTATGAAAAAGGCATATCACGCCCGATGCAAATGTCGAGAAAAAACGGGGAGACCGAggagaaaaacaacaaaaggagaaataacaaaaatttgaAGAGCGTGCCTAAATACGAGGTATTCCTCGGCGGCTCATGCAACCCGACAACCTGGCGACAGGACACAGCAATACCCATGCTGAAAAAACTGGGAATCACTTTCTACAACCCACAAGTGTCACACTGGGGCCCCGAACTGGTCGAGTTGGAGTGGAAAGCCAAGCAGCACGCCACCGTCCTCTTCTTTGTGATGGACAACGAGACGCGCTCAGTGGCGTCCCTGATCGAAGCAGCTCACAGCGCCGCGAAGCAGCGGAAGCTGATCCTGGTCATCAGCTCGTACAAAGGGCCGGGACAGGAAATCTGCGGCGAGTTCCTGTCGCAAAAGGAGTACGACGACCTGGCAGCAGGGCAAACGGTTTTACAAGACTTGGTCGAGCGACAAGGGATCCCTGTTTTTGACAGCATTCCTGTGGCGCTGAATTGCACAGCTAAAATATTGAGAGAAAACCTCAGCGTACAAGACTTGAGCCTGAAGGATTTTGCGCAGCCAGTGAAAATGGCGCATGTACAGCTTGGAGATAAGTTGATAAAATTAAGGGAAACGTTTGACGCGCTAGACCACAACAGCTCAGGGCAGCTGAACCTGGCCGACGTGTGCATGGCGTTCAGAATACTAACCGGCAAGAATCTTTCGATGAAAGACCTCCGGAGTATTGTCGCGAGTCAGAGAGGAGTTCTGGGAAAAGACGTAACCGACGTGCCTCTTGAGCAACAGTGCGTCACATTCGAGCAGTTCTGCTCTATCATGGCTGAATTCAAGATGAGAGAAAAATGGGTAATTGGACCGGCGTCAAGGTCGCCCCTTTCGCGTTCTCCGTCGAGCACAAACAACATGTCCATGAGTCAACCACCCAGCTGCCTGCGAGACGTCTACCTGGGCGGCTCGGTCAGCGACTCAAACTGGCGAGACGAAATTGCCATTCCTATATTTAAGAAAAACGGGCTCACCTACGTGAACCCGCAACGCAACTCTGGCAGCTGGGGTAGTCGGCTAGTTCCTATCGAGGCTGCTGCTATGGACGCCAGTTGGCTCCTCTTGTTCGTGATCACCAATAACTGCAGGGCCGTGGCATCAATGGCAATGGCATCTCACTACATTGGCCTGGGTTGCAACATAATTCTGTGTGTACAATATCTTCCTGATGACTGTGTAATTGATGGCGAAAAACTGTCGAAGCAAGCGATAAAGGACTACAACAGGGGCCGCATGTATCTGTCCGATTTGGCCAACAGGGACGGAGTTCCCGTTTTTGAAAACATCACAGAGGCAGTTCAGTGTGCGGTGACTAAGTGCCTGAACCGATGA
- Protein Sequence
- MDNETKLYMKRMLLSGDAVVTQFKGGGGGSMVSDVWKKFGRIAIRATGNLVVGVVACSLCFKVYSYKDSSQGTSTLRLHVCGNDDAPVRKVRKSGGTDKPSYMNQATPFVGGPAGERAKHQLPIADRSILLLVGVGSRVVRVRQAASETVYISMSQHYVLTKKSTRMGRVRRNYSRKDMEDAVRAVQERRMNLNSAANYFCIPKSTLHYVVTGKSKMDFNRPPFIMSKGQENELVRVLASMTYEGVVFNFNNIEEVVERRLSGNKNPFAHGRPGRSWWNDFRLRHPEIEFVFHAFAPKDTPGSAEASWPAVNSPQVVQRLKSGDLLNAPQSMTQREIKPILPKPSTSAAAAMSPPYQDSSQPAPQARPLQPKQTPKAAPKPKSSAAASQPRSDNDDSEPQQVCLRWNSFHSNMETMFPTLLYKEKFVDVTLACEGRLIKCHKVVLSSCSPYLERLLSDNPCKHPIVLMPKDVPYWALRAIVDFMYRGEVNVEHEQLAPLLAAAESLQIKGLAGSPGDAGSRKDGRPGVKRKRIESPAQTNQQPKPPQPTPQNNTSSQQSTSSPATATAQSSSKKEAKESPSQKHTQMAPHIAESLRGLSPGIEITPLVSFEEIKTEPIDSNDDGSLEPPDDYGIGKVSPFKGYDDGDESLPVSHVESLMEEEDMGDESDTLNDHSQIPDPNDLLSTEMEPIEEEDDSANVYSENGMDFPDCGLSEEASDLVESYAEVCMPSTIDNVSLASISEDINFETKLKVLDAVLPTAAKEKPSKYRIENGVYFCDLCDANFVDLENCTSHVKEHSKKSAYLCPTCNLPCKSHIDLVKHCKETHKEDGLFRCGKCSLVFGRQTQLKYHERRVHLQERSQVCQFCGKGFFKRCDLKMHLNIHLGIMKNICVKPYVCCTCGVRFNQVSALKNHISHRHPVGNKKDGYPCPSCGKIMTTIAVLKKHLKLVHKSSLDSAVNKIQSKETSSRKFYCKICGLNFNNQSALHDHEKETHASAEEFSCKSCNQKFKSIGDIKTHCCVSPIGDTTRLMVKQLLDMQTDDFSEEEENLVSEEVICNETVPPNEPVEEVISTPTNDGSAMREMVFHVQAEGHSELMAVHVKYDMNYIIPTENQDVKRAETNIVKPVAPEIVKNEIPKIAEIPKPPEKEAPQTKKFACGDCGKSFSKKHNYKQHLATHNIELKKYVCKICNQVYAWKSSLNKHVLMNHTEKSSTYLCNLCPKSFNRSQAFSEHVRRDHIGEKPHKCAQCGKAFFKKSDLTVHTRIHSNDKPYICGTCGKTFSHVSHIIRHERIHSGVRPYSCDVCGKAFAQSTALQIAPPPAPWPAKAVRWLRLRSTRRPAVAGSASMSAQVFGQNTRKVYSVWYGRVGTTNSITSDQVQQVFNDMDLYPSKSQVYEMLQCAKECANRSTAAYLTFGEFCVFATELKRCYEKGISRPMQMSRKNGETEEKNNKRRNNKNLKSVPKYEVFLGGSCNPTTWRQDTAIPMLKKLGITFYNPQVSHWGPELVELEWKAKQHATVLFFVMDNETRSVASLIEAAHSAAKQRKLILVISSYKGPGQEICGEFLSQKEYDDLAAGQTVLQDLVERQGIPVFDSIPVALNCTAKILRENLSVQDLSLKDFAQPVKMAHVQLGDKLIKLRETFDALDHNSSGQLNLADVCMAFRILTGKNLSMKDLRSIVASQRGVLGKDVTDVPLEQQCVTFEQFCSIMAEFKMREKWVIGPASRSPLSRSPSSTNNMSMSQPPSCLRDVYLGGSVSDSNWRDEIAIPIFKKNGLTYVNPQRNSGSWGSRLVPIEAAAMDASWLLLFVITNNCRAVASMAMASHYIGLGCNIILCVQYLPDDCVIDGEKLSKQAIKDYNRGRMYLSDLANRDGVPVFENITEAVQCAVTKCLNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00344378; iTF_00344576;
- 90% Identity
- iTF_00344378; iTF_00344576;
- 80% Identity
- iTF_00344378; iTF_00344576;