Cdip002337.1
Basic Information
- Insect
- Cloeon dipterum
- Gene Symbol
- lov
- Assembly
- GCA_949628265.1
- Location
- OX451259.1:27239195-27244114[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.15 2.7e+02 1.4 0.0 10 23 86 103 85 104 0.79 2 2 1.3e-18 2.3e-15 56.0 0.0 1 44 383 426 383 427 0.96
Sequence Information
- Coding Sequence
- ATGACTTCTGCTGAGGTGTGCGCCCCCGGCTACAGCCTCCGATGGAACAACCACCAGTACCACATTCTCAATGCTCTCGACGCACTTTTGCAGGACGAGGCTTTTGTTGACGTTACTTTGGTTTGCGACGAAGGAAGGGTCAGGGCACACAGAATTGTCCTGTCCGCGTGTAGTCCATATTTTCAACGCATCTTACTGGACTCGCCATGCAAACATCCAGTCATAGTTTTGAAAGATTTGAAGGAATGGGAAGTGCAAGCAATAGTCGATTTCATGTACAAGGGCGAAATCAGCGTGAGCCAGGCGCAACTTTCGTCCTTAATCAGAGCCGCCGAGTCGCTGCAGATCCGCGGACTGGCGCACATGGAGAAAGAACCGCAATCAGTGAGCAGCCACGAGCTGATGGAAACAGCCGCCACCCCTGGCTCACCTTCTTCGGCACCTCCGCTGCCCTTTTCGCCAGTGCCGTTCACGGGGCCCCGAGGCCCTGAGAACGGATCCCTCCTCCTTTCCTCACCCTTTTCGCCCTCACCCGCACCCCATTTCGAGCCTTCGCCAGTGAAGCAATCGCCGATGAGTGAGGCCAGTTCGCCCATCAACTGCCGAGACCACCACAGAGTTTCGCCTGTTCCCAGAAGAAAACAGGCGAGACCGAGAAGACGATCTGGTGAAATGGTGGCACGCGACCTCAAAAAGCGGCAACCGAGTCGACCTCCGTCGCCCGACCTGCCTGAAAACTTGAGCATCAAAAAGACGCATTCGTCGGAAAAGGTCAACACCATTCTCAACTCGTCCGCTTCGCCGCCGACGGAACACTGCCCGGCGCCGTCGACGCTGCACTCGCCGCCGGCCAGCGGCGCCCCCGAAAGCCCGCTGACCTCGGCCGACCTGCCGCCAAACAAGGCACCCTCGTCGCTGCCCGCCGACCTGGCCGCGAGCGAACGACTGCTCGATTTTTCCATGGGTGGCTCTCCCCACACCCTCGGCCTTCCAGATGCGCAATTAGACACAGCAGGTTTTCCTGTTTTACCCACCGTTTCTTCTATGCCACTGACTCCGCCACACATGTTTTCCATGGAATCGGCACATTTAGTTCGCCCAAAGGGGCAGCACAGCGCGCCGCGAGGCGGACCGCCGCGGTCGTGGACCAACGCCGAGCTTACCGAGGCGCTGCAGCATGTATGGAACAAGAAGATGACAACGTCCCAGGCGTCGCGAATCTTCGGCATACCATACAACAGCCTGCTGATGTACGTGCGTGGCAAGTACGGCAAGTCGCTCAAGCTGGAGCAACTGAAGAAAGACTGCGAGGTGCTGTCCggggcgccgccgccgcccatCGGCCGCGACTCCAAAATGCCCCCCGAAGACCCCCTCGCCAACAACAACCCGCCGGACACGACCGACCTCAACTTCAACCCGTACACCAACTTCTACTCGGACTTAGCGTTCCCCATTCCAGTGAGCATGATCCACTTGTTGCCCCAGTCCGAGAAGAACAGAGAACTGGCGGCCGAGGAGCGAGCCAACGCGCTCGACCTCGTCACCGGGCTGATCGACACATCGCTGCCCAAGAAGTCCATGTAA
- Protein Sequence
- MTSAEVCAPGYSLRWNNHQYHILNALDALLQDEAFVDVTLVCDEGRVRAHRIVLSACSPYFQRILLDSPCKHPVIVLKDLKEWEVQAIVDFMYKGEISVSQAQLSSLIRAAESLQIRGLAHMEKEPQSVSSHELMETAATPGSPSSAPPLPFSPVPFTGPRGPENGSLLLSSPFSPSPAPHFEPSPVKQSPMSEASSPINCRDHHRVSPVPRRKQARPRRRSGEMVARDLKKRQPSRPPSPDLPENLSIKKTHSSEKVNTILNSSASPPTEHCPAPSTLHSPPASGAPESPLTSADLPPNKAPSSLPADLAASERLLDFSMGGSPHTLGLPDAQLDTAGFPVLPTVSSMPLTPPHMFSMESAHLVRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKDCEVLSGAPPPPIGRDSKMPPEDPLANNNPPDTTDLNFNPYTNFYSDLAFPIPVSMIHLLPQSEKNRELAAEERANALDLVTGLIDTSLPKKSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00344379;
- 90% Identity
- iTF_00344379;
- 80% Identity
- iTF_00344379;