Cdip015401.1
Basic Information
- Insect
- Cloeon dipterum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949628265.1
- Location
- OX451263.1:10830774-10851564[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 10 1.9e+04 -5.5 2.6 2 11 82 91 81 91 0.89 2 3 1.4e-17 2.6e-14 52.7 0.1 1 40 302 342 302 347 0.93 3 3 6.4e-19 1.2e-15 57.0 0.0 1 43 618 661 618 663 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAATGCTCTTACTCTAGCTGCATCCAAGAAAAACGTGCGATCAAGAGAGAACTGCAGAAATGGACCAAGGACCTCGTCTACCTAGTGGGACTGGAGCGCGTCGCTGAAGAGTTGATGGGCAGACGAAGATGGCGACAGTACCAAGCCCACGTTCTGGGAGCGGAGGCGATCAGCAAACACGAGACTCAGACTGCCTGGGAGAAGCGCTCCAAGGAGGAGATTGtcaaggaggaggaggaggaggagctGGAGGCAGCAGCGGAGGCGGCAGCCGGGGCAGCAGCCCCCGAGGATCTCCCGAAGGACTGGCAGCCCGAAGACAGGTGCTACTTCTGTGACGGCGCGGTTCATACGGAACCTTGCAGAGTGAGCCTCAGTCCGCAGCCCTCCGAGAGCAGCCAGAGCTCGATGGACTCCTCTCCCCAGCCGGCCTCTGTGGACCTGAACGCGGCCGTCGGCCTGCATCCCGGCAGCCCGGCCTTCTCAATCGAGTCCCTCAACAGAATGGCCACCTCGCTGGCCGCCATGGCCAGCATGGCCGGCAACCCGGCCGCCGTCATGGCAGCCGCGGCCGCTGCCAGCGGCACCGGCCCCGGGATCAACCCCCTGCTGGCCGCCGCGCCTGGCTTCTTCCCCTGGTACCTCAGCCAGGCACTCGCcaagcaacagcagcaacaccaacaccagcagcaacaacaacaccagcagGTTTCCCCCGCTGCCACGCCATCCGGCACAGGAGGCGAGCAGCCGCTCGACCTGAGCGCCAAGCCGTCGAGCAAGTCAGACAGTCCGCTGGACTCGCCGACCTCCCTCAAGATGCCCGGCCTGGACGTGAAGCCCATTTTCCGGGCGAAACCGCGACTCAGCAGCACCGTGGCCGGCCGACGCACCTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAACTCGGCACCAGACGCGCGGCCGTCATCTACGGCATCCCCAGATCTACTCTCAGAAATAAGGTGTACAAATTAGAGCGGGAGCGGGAACGCGACCACCTGTTGATGCAGTCGACGCCGCCACCACCGGCGTCGACGTCGACGCCGGCGGCAGCCGCCGACGACAACTCTGGCGACGAGGACGGGAGCAAGACGCTGTCCATGGAGGAGCTGGTGCGCTTCTCGGGGCTTGACAATCTGCCGGCGACCGACTCGCTGCGGCAGCTGCTGCAGAGCAGTTCTGGCGGCAGCAAATCGTCGTccgcggcgccgccggcgGCGCCTCCATCCGCGTTTCCGGAGCCGCCGGCGGCGCTGGCTCCGTACCTGTCGCAGCTGCTCGGCGCCGCGTCGGCCGAGCAGCAGAGCGGCCTCGTCGAGCTGATGAAGCGCATTGGTGGTGCCGCCGCTGCAGAGAACAACAACAACGCCAGTGGTAGCGGCGCCGAGGCCACCAGCGAGGAGGAGACGACGCCCAATAGCCTGCTGCGCATTCCGTCCTTCAAGCCAAACGGCAACGAGGCCTCCGAGCCCCGCGGCAGTGGCTCCTCATCGCCCTCGCTCGGCGTCAGCCTCCGCGACGTCATCACCAAGAGCATCACCCAAAAGTTCCAGTCGTCGACGCCGTCGATTTCGGTGGTTGACCCAGCCACCCTGATGGCGAACCCACTGAAGAGGATGTCGTCGGACCCTGGCGGCGACCGCTTTTTGCCGCATCACCAAAAGCCGCACCACtcgcagcaccagcagcaccaccaccagtcgcaccaccaccaacaacagcagcaggcgggcagcggcggcgacaGCAAGAACAAGGGGGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGTGACAGCCTGATTGAGGCTGTGCGGGCCGTGCAGCGTGGCGAGATGAGCGTGCACCGCGCCGGCTCCTATTACGGCGTGCCCCACTCCACCCTCGAGTACAAAGTCAAGGAGCGGCACCTGATGCGGCCACGCAAGCGCGACCTGAACAAAGCAAGCTCGTCGGGCGGGTTGCCGGAAGACAAGGCGAAGATCGGGCCGCCGCGTGGCCCGCTGCCAAAGCCGCCTCCAGGGGGCGCTGGCGGCTTCCCGAACCTGGCGGCCATGGCTGGGCTGGCGAACGGACTGGGCGGCAAGGGCCTATTCGGGCcggggccgccgccgctggccTCGGCGGCCGGGCCGTATCACCAGTTCTGGCCGGGGGCGGCCAACCCGTTCATGATCAACCCCGAGCTGTATCAGGAGCAGCTGCTGGCCTCGCACATGATGCAGCGCAAGGCGGCCACCGACCCCGTGGCCGACCGCTTCTTCGACGGCCTCATCCGCAACTCGCTGGAGCGGCCGGCGGCCGGAGGGGAGGCGGCCGGCCTCGCAAACCGTGCCCTCCTCGAGCAGTTGTGCCGGGGGCGGCcgccggcggccgcggccaccgccgccgaGCAGACTGTCGTCGACCTGTCGCAGGAGGACGAGCGGCCGGCCGCCGACTCGGACGACGAGTCGGTCAAGGCGGCCGACGACTGTGATAGGAGGGAGGAAGAGGATGCGGCCGACGGCCAGGGGACCAGCAGCACTGCGCCCAGGAATTCTACCGACTGA
- Protein Sequence
- MAECSYSSCIQEKRAIKRELQKWTKDLVYLVGLERVAEELMGRRRWRQYQAHVLGAEAISKHETQTAWEKRSKEEIVKEEEEEELEAAAEAAAGAAAPEDLPKDWQPEDRCYFCDGAVHTEPCRVSLSPQPSESSQSSMDSSPQPASVDLNAAVGLHPGSPAFSIESLNRMATSLAAMASMAGNPAAVMAAAAAASGTGPGINPLLAAAPGFFPWYLSQALAKQQQQHQHQQQQQHQQVSPAATPSGTGGEQPLDLSAKPSSKSDSPLDSPTSLKMPGLDVKPIFRAKPRLSSTVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLERERERDHLLMQSTPPPPASTSTPAAAADDNSGDEDGSKTLSMEELVRFSGLDNLPATDSLRQLLQSSSGGSKSSSAAPPAAPPSAFPEPPAALAPYLSQLLGAASAEQQSGLVELMKRIGGAAAAENNNNASGSGAEATSEEETTPNSLLRIPSFKPNGNEASEPRGSGSSSPSLGVSLRDVITKSITQKFQSSTPSISVVDPATLMANPLKRMSSDPGGDRFLPHHQKPHHSQHQQHHHQSHHHQQQQQAGSGGDSKNKGGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDLNKASSSGGLPEDKAKIGPPRGPLPKPPPGGAGGFPNLAAMAGLANGLGGKGLFGPGPPPLASAAGPYHQFWPGAANPFMINPELYQEQLLASHMMQRKAATDPVADRFFDGLIRNSLERPAAGGEAAGLANRALLEQLCRGRPPAAAATAAEQTVVDLSQEDERPAADSDDESVKAADDCDRREEEDAADGQGTSSTAPRNSTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01046169;
- 90% Identity
- -
- 80% Identity
- -