Choo008144.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- Zmiz1
- Assembly
- None
- Location
- NQII01001443.1:123325-189057[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-25 3.6e-22 77.1 4.1 1 49 540 588 540 589 0.98
Sequence Information
- Coding Sequence
- ATGGTGGCGGCGGCCACTGCCACCGCCACCGCCACCGCCAGCGTCGTCGCCATGCAGGAGCGTCAAGACATGGGCCAGCAGTTTGGCCAAATGCAGAACGTCTCGCAACATGGAATGCAGGCGCAGCAGTACGCCGGCGGCTACGGCACGCAGAGGGCCCACGGTCCCATGGGCATGGGTAACCCCAACTCTGCCATGTCGGGCATGGCCAACATGGGCATGGGCTCCATGGGTGGTGGCATGAACGGTATGAGTCCCATGGGCTCCATGGGCATGATGGGCCAGAATGGAAGCATGCACGCTGGCATGATGGGTTCCATGGGGCCAGGCTCCATGCCCATGAACAAGCTGAGCATGCAGGGCCCCGGCCCACAAGTGTATCCCAGGCGGATCACTCCCTACCCCAACCCCGCAATGCACATGTCTCAGAAGAGGCAGCAGCAGGGGTATCCTAACCCTGGGCCCGGCCCCACGATGCAGCCGAGCTTTTCACCCGCTGGTACGCCACAGTACCCAGCTGGCTATGGTAATGGAAGGCCAGGCTTCCAGTCGCAATACCCACCTCAGCAGGCCATGGGTCCATCGGGGACGTTCGGCCCCACGACGGGGGTGCGTGGGAGCTCTGTGGGCATGAGGCAGGCGACGCCCCCATACACGACCAGCGCCCAGGCGAGCCACCAGTATTTCGGTGCAGGGGCGGGGCCGCAATATGGTGCTGCGGCAGCCGCGGGGCAGTACGGGGCGGGCGCGGGCGCCCAGTTTGACCAGGACATGGGAGCTATGCGCAGCAACATGAGCTACCAGCACAGCCCCATTCCAGGGAACCCCACGCCACCGCTGACACCGGCCAGCAGCATGCCCCCGTACATCAGCCCCAACGCAGATGTCAAGCCCAGCTTCCCCGACCTGAAGCCTCCCCTGCCCATTCAAAAAGATGATGAACTGCGTCTGACATTCCCTGTCCGAGACGGCATCATACTACCCCCGTTCCGATTGGAGCACAATCTCGCCGTCAGCAACCACGTCTTCCAGCTCAAGCCCACCGTTCACCAGACACTGATGTGGAGGTCCGACCTGGAGCTCCAACTGAAGTGTTTCCACCACGAGGACAGGCAGATGAACACCAACTGGCCAGCGAGCGTCCAGGTGTCTGTGAACGCAACCCCGCTGAGCATAGACCGAGGCGAGAACAAAACATCGCACAAGCCGCTCTNCGAGGACAGGCAGATGAACACCAACTGGCCAGCGAGCGTCCAGGTGTCTGTGAACGCAACCCCGCTGAGCATAGACCGAGGCGAGAACAAAACATCGCACAAGCCGCTCTACCTGAAGGAGGTGTGCCAGCCGGGTAGGAACACCATCCAGATCACAGTCTCGGCGTGTTGCTGTGTGAGTTTCTCCTATATTCTTTTGCCTGAACTGTTGCAGTCGCATTTGTTTGTTCTGCAACTGGTTCACCGGCCGAGCGTTCGCAGTGTGTTGCAAGGCCTGCTGCGCAAGAGGCTACTGACGGCAGAGCATTGCATTTCCAAAATCAAACGCAACTTCAGCAACACTGCGTCATCCAGTGGGCCCCTCTGCACAGACAGGGACGGAGTTGAGCAGACCGCGCTCAAGGTGTCTCTGAAGTGTCCGATAACCCACAAAAGAATCACACTTCCTGCGCGTGGTCACGACTGTAAACATATCCAGTGTTTTGACCTGGAGTCTTACCTCCAGCTGAACTGTGAGCGAGGTTCCTGGAGGTGCCCTGTTTGCAAtaaggGAGCTCAGCTAGAAGGCCTCGAAGTGGACCAGTATATGTGGGGCATTTTGAACACACTTAACACGTCTGATGTTGAGGAGGTTACCATTGATTCGTCAGCAAACTGGAAGGCAGCGAAGAATGTTCAGGGGATAAAGACGGAAGATGACAGCGACTCCTGTGGCGCAAAGAGGATGAACAAGGCAATGTCGCCTGGCAGCATGACACTGCCCACGATGAACAATTGGGACATGAGTCAAGCTATGTCTCCGTACATTCCTCCTGACATGAACAGCATTGCAAGTGGTTCGATGATGAACACTGGCCCACCTCCGTACAGCACGGGCAGCCTGGGCCGAAGTAATTCCTACGACTTCGGCGCTGGGTCAAATCCAGGCAGCAACGAGTATGCAGGAGGGGGTGGCCCACTTTCCCACCTCAGCGAGTCTGTCAATTCCCTCGACCCCTTGAATGCAATGGAGAAGACGCTCAACGAGCAGGTATACAATATGCCGCACACCCCACACACGCCACACACCCCGCACACCCCCCACACACCCGGCGGCACACCTGGGAGCGCGCACACCCCTGGTGGAGGTAACGGCCCACCCAGCGTCCCGCCTGCGGGCTCTGGCGACGTCACTAGCACGAGTGCTGGCCCCGGCAGCGGCAGCAACAGCGGCAGTAACAGTGGCAATGCGGCCACTGACACGCCGGATATACCCTCGGACCTCAACTTTGACCCGGCGGCTGTCATTGACGGCGAGGGACAGGGCCAGGAAGGCCTGAACCTGCTGCCGGACAACGTAGTGGATCCGATGGAACTGCTGTCGTACCTGGATCCGCCAGATCTTGCCACACCACCGTCGAGCGGCGCAAGCAGCAACGGCAACAACGGCACGCCGGGAAACACGACCAGTGACGACATCCTGGCGCTGTTTGAGtga
- Protein Sequence
- MVAAATATATATASVVAMQERQDMGQQFGQMQNVSQHGMQAQQYAGGYGTQRAHGPMGMGNPNSAMSGMANMGMGSMGGGMNGMSPMGSMGMMGQNGSMHAGMMGSMGPGSMPMNKLSMQGPGPQVYPRRITPYPNPAMHMSQKRQQQGYPNPGPGPTMQPSFSPAGTPQYPAGYGNGRPGFQSQYPPQQAMGPSGTFGPTTGVRGSSVGMRQATPPYTTSAQASHQYFGAGAGPQYGAAAAAGQYGAGAGAQFDQDMGAMRSNMSYQHSPIPGNPTPPLTPASSMPPYISPNADVKPSFPDLKPPLPIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLXEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCVSFSYILLPELLQSHLFVLQLVHRPSVRSVLQGLLRKRLLTAEHCISKIKRNFSNTASSSGPLCTDRDGVEQTALKVSLKCPITHKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCPVCNKGAQLEGLEVDQYMWGILNTLNTSDVEEVTIDSSANWKAAKNVQGIKTEDDSDSCGAKRMNKAMSPGSMTLPTMNNWDMSQAMSPYIPPDMNSIASGSMMNTGPPPYSTGSLGRSNSYDFGAGSNPGSNEYAGGGGPLSHLSESVNSLDPLNAMEKTLNEQVYNMPHTPHTPHTPHTPHTPGGTPGSAHTPGGGNGPPSVPPAGSGDVTSTSAGPGSGSNSGSNSGNAATDTPDIPSDLNFDPAAVIDGEGQGQEGLNLLPDNVVDPMELLSYLDPPDLATPPSSGASSNGNNGTPGNTTSDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01447171;
- 90% Identity
- iTF_00624409;
- 80% Identity
- -