Choo004567.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- pnr
- Assembly
- None
- Location
- NQII01000572.1:117173-163525[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3 1e+04 -7.1 4.2 21 26 13 18 11 18 0.80 2 3 1.7 5.8e+03 -3.8 0.1 10 16 255 261 254 262 0.82 3 3 2.3e-18 8e-15 53.4 4.4 1 35 561 594 561 595 0.98
Sequence Information
- Coding Sequence
- ATGTGTGGTGTGTCGCCTAAGTTTTACGAGCTTTGTCGTCTTTGTTTATCGTGTGATGGTGTTAAATCATCTATTTTCGATGACGAAGGAATTCAGCGCAACTTTCCACTTAAAATTATGACGTGTTTGTCAATATTGgtttctgaGAGAGACCAACTACCGCCTTTAATCTGTCATCGTTGTGTTTACAAGTTGGATACACTATACGACTTTAGGGAAGTATCCAGAAAATCGGATGTGATATTGAAGCAATATTTGACTTATACGGAACATCTTGCAAATACTCAGGAGCAAGGCAAGAAGGAAGTGCAGTGTCCAGTGCGTGCCATAAGCAAGGAGCGGCCCAACAGCAGGAATGGGGATCTGGGGGCTATGGAACGCGAAATGCAGGAGATGGCGGCCACCGAGGCGTTGGAGTTAAGGCTGAAGAAGGAGCCAGCTGATGATGAAGAAGAGCTGTGCAACGGAGTGAAGGACGAGAGGGAGGATGTCACTCTCGACGCCAGTGACAAAGCAGGTGATGGAGAAGAgttggaggaggaagaggaggtgaTGCTGGACCAGTCGGATGGGTCGGATTACGAGGACTACGAGGGTCAGGGGCTGGACATGTCGGTGGACTCTCGCAGGACCGAGGAAGGGGTTAACAAGGAGCAGCTTGAGGAAGACATTGAGGAAGTGCAGGCTGACGACAGGAGTGCCCCGCTCACAGATGAGGACAGCGACTGTGGCTCGGAATCCCGCGTCGAAGAGGGCAGCCCTCCTGAATGGCGTGATGGAGAAGAgttggaggaggaagaggaggtgaTGCTGGACCAGTCGGATGGGTCGGATTACGAGGACTACGAGGGTCAGGGGCTGGACATGTCGGTGGACTCTCGCAGGACCGAGGAAGGTGTTAACAAGGAGCAGCTTGAGGAAGACATTGAGGAAGTGCAGGCTGACGACAGGAGTGCCCCGCTCACAGATGAGGACAGCGACTGTGGCTCGGAATCCCGCGTCGAAGAGGGCAGCCCTCCTGAATGGCGTGTCACTGTGGGGGCAATGAATACTAGCTTTGGCAGCAACGGGGGTGGAGGAGAGGCAAGCAATCTCCTGAGGACGCTGATCTCGTGTCGTAAGCTGGGCATTTCGCCCATGGAGGTGGCTGCAAACAACCGTGCGGTGCCAGCTGCATTGTCGCTGCAGCATTCACTCAAGTCTCGCAGTAAGCTGGCAATGAATACTAGCTTTGGCAGCAACGGGGGTGGAGGAGAGGCAAGCAATCTCCTGAGGACGCTGATCTCGTGTCGTAAGCTGGGCATTTCGCCCATGGAGGTGGCTGCAAACAACCGTGCGGTGCCAGCTGCATTGTCGCTGCAGCATTCACTCAAGTCTCGCAGTAAGCTGTATGCAGCCATCCATGGCTCCCCTCTACCCATCGGCAGCTCACCCCTGCAGGCAGAGATGCTggggaatggaaccaatcagccGTGCACATCCCCCTTggtcaacaacaacaacaacattctGCCGGCAGGCAAGTTGGATGGTAGCCGCAGGAAGCAAAGTTTCCCCTCCAAGGCTGACCCCAACACCCAGGGTGATGTCTACCTGCCAGACTTCACCGGGAACAACCCCTGGTGCAGCATATCGTCCTCTAAGTCTGGGAGGTTGGCAGCACGTCGAGTTGACTTGGCCTGCACCAACTGTGGAACTATGACGACCACCATATGGCGGCGCAACCCTGAGGGAGAGATGGTGTGCAATGCTTGTGGCCTGTACTACAAGTTGCATGGTGTAAACCGCCCTGTCACCATGAGGCGGGACACTATCCACACCAGGAGGCGGAGACCCAAGGGTGAAAAGAGCAGCAGTCGACATAAAAACAAGCTGATGAATAATGGTAGCAGTAACAGCGAGGATCCAGTGGACATGTTGGCGGCCCTACGCAAGCAGATTCAACCCCACCTGATGCTCGCCCTGCAATCCACGCCACAAACAGCTGCCACGCCACCGGTCATCAAGACAGAGCACGGCCATTCTGACGAGGACGAGGCAGAGGCAGTGCCAGAGAGGCCCAGCGAAGCAGACCGGCCTCTCAACCTCGTGGCCACACCCGTCGCTGAATCACAGTGA
- Protein Sequence
- MCGVSPKFYELCRLCLSCDGVKSSIFDDEGIQRNFPLKIMTCLSILVSERDQLPPLICHRCVYKLDTLYDFREVSRKSDVILKQYLTYTEHLANTQEQGKKEVQCPVRAISKERPNSRNGDLGAMEREMQEMAATEALELRLKKEPADDEEELCNGVKDEREDVTLDASDKAGDGEELEEEEEVMLDQSDGSDYEDYEGQGLDMSVDSRRTEEGVNKEQLEEDIEEVQADDRSAPLTDEDSDCGSESRVEEGSPPEWRDGEELEEEEEVMLDQSDGSDYEDYEGQGLDMSVDSRRTEEGVNKEQLEEDIEEVQADDRSAPLTDEDSDCGSESRVEEGSPPEWRVTVGAMNTSFGSNGGGGEASNLLRTLISCRKLGISPMEVAANNRAVPAALSLQHSLKSRSKLAMNTSFGSNGGGGEASNLLRTLISCRKLGISPMEVAANNRAVPAALSLQHSLKSRSKLYAAIHGSPLPIGSSPLQAEMLGNGTNQPCTSPLVNNNNNILPAGKLDGSRRKQSFPSKADPNTQGDVYLPDFTGNNPWCSISSSKSGRLAARRVDLACTNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSSSRHKNKLMNNGSSNSEDPVDMLAALRKQIQPHLMLALQSTPQTAATPPVIKTEHGHSDEDEAEAVPERPSEADRPLNLVATPVAESQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -