Choo005245.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- glmp-b
- Assembly
- None
- Location
- NQII01000134.1:192228-226609[+]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-86 3.3e-82 275.5 0.1 1 307 41 355 41 361 0.92 2 2 9.1e-16 9.4e-12 43.8 2.2 305 352 443 490 429 491 0.93
Sequence Information
- Coding Sequence
- ATGAGTTCGATACATTTTTATGTGGCAACAATTCTTCTTTTACCTTTTACATTGAGTTTGGAGCGGAAGCTGAGGACCGTGGTGAACCCAGGATGCGACATCAGCGTGTGCAACAACGTGACCGTGGTGCACGTGCGAGCGGACGGCCCTCAGGACACCATCCACTACTTGTGGGGGTTCCTGGGCAAGCCGACCATCTGGTTCGCCATGACCAGTCCCACTACCAACCTCTCCATAGACTGGAACACGCTTGTCTGGGAAAACAGGCGTGCCGTACACTTCTCTGAGCCTCCTCTCTACAGCTTCGGAGCAGTCTTCAACAAGGTACGAGGTCTCGACAGCTGCCTCTACAACGATGCAGCGGACTCCGGCTACCTGAACCTGACGGAGAGAGGCGCAGGCTACAGACGAGAGTACGACCTGCGCGACTTCCACTGGAAGATGGTGAACGTGAAGCACGACCAGGAGAGTGCAGAGCTGTTGGTGACCAGCACCAAGTACCATGTGCCTGGCCACGTCCTAGCAGGCAGCATCTCTTTCAAGGTCGCAGCATACGGCTACAAGGACCACGCGGAGAGTCTTCCCCACCTCCTGCACACGGCCAACAGCTCTCAGGTCGACATCGTTCTCGACGGGCTGGTGACCAACTCCAGCTTCCGGAACGCTCGCTACGTGGTCGACCTGCTGTTGGTCGGCGCGGACGGCAGTAATTCCAGCATGCTGCTCAAGTCGTACAAGAGCCTAGACGACGAGAATACCCCAGGAGTGTTTACGATGGTAGACCTGCAGACAGCGTCCAGTGAAACAGCGCAAGGTGGGGGGTACCTCCAGTGGCGTCCCGTGGCGTACGTGTCAAAGCAGCGCGACCTCAGCAACTCGACAGACGCCCACAGTTACCAGTTGGCCGACGTGCCACATCCAGGCAGCGTTCTCAACAACTCGCTGCTGTATGCGGTCTACTCCTACGTGTTGGACACTCCTGCTCTGCTCGCGCAGGAGGCTGTCGTGTCTTTCGGTGAGAGAGAAGACGGCTTCTACAAGAAGACTAACTTTACTTCGTGGGAGGCAGGAGGCAGCGTNTTGAGGTTTGGGAGGGAGACACGAGGCAGCGTCATGCGGTGTTGCCTCGTCACCGCAGGGAGGCAGGAGGCAGCGTTATGCGGTGTTGCCTCGTCACCGCAGGGAGGCAGGAGGCAGCGTCATGCGGTGTTGCCTCGTCACCGCAGGGAGGCAGGAGGCAGCGTCATGCGGTGTTGCCTCGTCACCGCAGGGAGGCAGGAGGCAGTGTCGTGCGGTGTTGCCTCGTCACCGCAGGGAGGCAGCGTCATGCGGACGTTCACCATCGGCTACGGCCAGCCGCCACACGAGGACTTCTCCTTGCTCGTGGTCCTGGTGATCAGCATCGGGCTGGGGCTGCCGGTCGTCATCATAGTCGTCACTTGCATGGTCGTGGCTGTGCGCAGACTGGCTCGTAGCGACGACGACTTGTTCCTTGGACGGTGA
- Protein Sequence
- MSSIHFYVATILLLPFTLSLERKLRTVVNPGCDISVCNNVTVVHVRADGPQDTIHYLWGFLGKPTIWFAMTSPTTNLSIDWNTLVWENRRAVHFSEPPLYSFGAVFNKVRGLDSCLYNDAADSGYLNLTERGAGYRREYDLRDFHWKMVNVKHDQESAELLVTSTKYHVPGHVLAGSISFKVAAYGYKDHAESLPHLLHTANSSQVDIVLDGLVTNSSFRNARYVVDLLLVGADGSNSSMLLKSYKSLDDENTPGVFTMVDLQTASSETAQGGGYLQWRPVAYVSKQRDLSNSTDAHSYQLADVPHPGSVLNNSLLYAVYSYVLDTPALLAQEAVVSFGEREDGFYKKTNFTSWEAGGSVLRFGRETRGSVMRCCLVTAGRQEAALCGVASSPQGGRRQRHAVLPRHRREAGGSVMRCCLVTAGRQEAVSCGVASSPQGGSVMRTFTIGYGQPPHEDFSLLVVLVISIGLGLPVVIIVVTCMVVAVRRLARSDDDLFLGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -