Choo001741.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- CAMTA1
- Assembly
- None
- Location
- NQII01002263.1:102002-171876[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-30 4.6e-26 90.1 2.0 2 80 87 164 86 170 0.96 2 2 0.00088 9.1 5.3 0.0 102 116 276 289 254 289 0.75
Sequence Information
- Coding Sequence
- ATGCTACTGGTGTCACCAAGGAGCACGCCATACAGAGTCAGCATCGTCATCACCGTCCGTACCATCACCGCTATCATTCTCGTCATTGTCCTCGTCACCATCATTGTAGTAATCTCAGTCACCGTTGTCGTCAATGTCGGAGCCGCTGTCagACCTGCTTGGAAGTGGTCGGGAGTCCTCGGCGTCCTGGCAGACGGGGAGCCGATCAAGCTGCCCGAAAACCTGGAGAGCCTGCCCAAGGCTGATCACTTCCCCACGCAGAGGCATCGCTGGAACACCAATGAGgagatTGCGGCCATCCTCATCAGCTTTGAGAGGCATGCAGACTGGCAGTCCAAGGAAGTCAAGATCAGGCCGAAGAGCGGGTCGATGCTGCTGTACAGCCGTAAGAAGGTGCGTTACCGCAGAGACGGCTACTGCTGGAAGAAGAGGAAAGATGGCAAGACCACAAGGGAGGATCACATGAAGCTGAAAGTGCAAGGAACCGAGTTCTGTAAGGATCGTGGGCACCTGGAACGTGCTTGTATAACCAAGAAGAAATATCAGTCGTCGGCAGATGCAGCAGGCAGAGATCAGCAGCGACATAGTGTCCTGGGAGTACAACATCAAGTGGACACAGCAGTTGCAGAAGAGAAAACAGGGGACAAAATGCCATCACAcgaatttgtagtttattttttgtacaatttccGGGCATATAACCGGAGGGGTCTGTTGTGCGTGCAAGTGAACTCAAATGGCAAACGCCTTATCGTGGAGATAGATACGGGGGCAGGCCATTCCTTCGAGATGAGTGCGCGGCAGCGGTGCAGCAGCGTGGGTGTGTTTCAGAACCCGGACATAGTGCTGGTGCACTACCTGAACGTCCCGTACCCGGACGACAACAAGCTGGCGGTCATCACCCCCAGCCTTGCCCTCTGGGGCGACAAAAAGGAGTGGACGAAGGAAGAGTTAGTGTCACAACTAAAGCCCATGTAG
- Protein Sequence
- MLLVSPRSTPYRVSIVITVRTITAIILVIVLVTIIVVISVTVVVNVGAAVRPAWKWSGVLGVLADGEPIKLPENLESLPKADHFPTQRHRWNTNEEIAAILISFERHADWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEFCKDRGHLERACITKKKYQSSADAAGRDQQRHSVLGVQHQVDTAVAEEKTGDKMPSHEFVVYFLYNFRAYNRRGLLCVQVNSNGKRLIVEIDTGAGHSFEMSARQRCSSVGVFQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKEELVSQLKPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -