Choo003806.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- -
- Assembly
- None
- Location
- NQII01005067.1:73424-101852[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.43 5.5e+02 0.0 0.0 28 39 207 218 204 220 0.81 2 2 3.2e-08 4.2e-05 22.8 0.0 3 45 558 603 557 604 0.95
Sequence Information
- Coding Sequence
- TTGTTCGCAGGTATGCCTGTAGTTTTTGCCCTGCTGGACAGACTCGCCATGTCCAAGAACGCATCACAGATTATTTCTGCgttcaaagaaattataaatgtcCTGTGCTCGGAAGAAAGAGAGAGGCATCTGTTTTACTTGTGCAGAGGCGTCCAGAAAATATCTGCGTATTTGGATCACGCGGACCAAGAGGTCTCAGAGTATGCCTACTACATCCTTGGGTACACTGCCGGTCAACACGAGGAGATAAAGAAATCGCTGACAACGGGTGCCATGTTCGACAGACTGTCTGACGCCATTGCCGCCCAGCAGTGCGCCAAGGGCGGCCTAAGCTCAGCCATCTTCCTGCTGTCTGTCGTGATGGTGGGGAACAACTTGGCCCACGAGTTGGTGCGAGAGTCGGGTTGCCTCAGCAAGCTGTTGCACCTGTTCATTCTCATGAGCCGAGACAGCTTCCTCCACAAATGGCAGACTGGGGCAGTGAAGACAGTGCTACAGAAGTGGTGCATCTTGTGTACAGCGTTGAgcgtgagcatcaacccttccgTCAGTGATGCCAACCAGGCAGAAGCGCGGATAGTCCTGCCGCAGgtgaTTCTTATTGCCTTGATGGTACTTACGCACTTGATTGAGAGATGTCCCAACAACTGTCGCGTGTTCAGTCGTGAAGGTGGTCCAGAAATAGTTGTGGAAGTCACTCAGCATCTCGAGGGAAATACCGACATTGTTAATGCCGCTAATCTGCTGTGGCAGTGCATCGAAGAATTCACTTCTGCAACTCAGGACTTTACCCCACTGGCAACACATGGCCATGGCAACAAAGGGAAGAGTGACGTGGGTGTAGCGCGAACTGCAGAAATTCCACTTGCTCAGCTCATGCGCTCAGGAGCAAACATGGAAAGCATTTTCAGTGACAGCATGACGTGGAAGGGGCAGGTCCCCATTATTGGTCGCTCAACCACGAGCAGAAGTGTCAGCACAAAGTGTACTGAAAATGTTTGTTCTTGTGCTTCTGAGTTAAACTGCTTGTCCGAACTCTGTGAAGGAAATGATTGTGACAAGGCAGAAATCCAGCAATGCAAAGGAGAAACATCGGTTATTTCTACTAGCAGTAACtattcattcaaaattttaagtcGCCTGATGTCGGTGTGTGGTAAGTTGTTTTCTAACAGGAACAATTCTTGTGCGGAAAATCTGTTGGGAGAAAaagttaacaaaacatttaatggtAAAAGTTCCAACACTTCCCGCGAAGAATGTCGATCTTGTAACAATCAGCAGGGCTTTGTGTACCAAAATTCAGTTGGAGTACAAACAACCCCTTCAATTTCTAACAAGTATAAGAAATTTGATGCGAAGTTTAGTAACAGAAGCACATCTGAATCAAAGAAAGAAACATCACTAATGACGGCCCGAAAGGCAGCGTTCTCTGCACGTAACGATTCTAATAGAACGGAAGTCCGTAAGGCAAGAAATCTGGCATCTTCATCTCACGGAAACATGAACTACAATACATGGCAGAACAATATCGGCAAGAATTCAACAAGCACTCCTTTAAAGCACCGTACTTCTATTCTAGCAACAACACCGTCAAAGGCATATAAggaccattcgagctgcacaccTTCTACTTCTAGTGTCCGTTCTGACCTTCTTGTATGTGTTCGCAAGTTCTCGGAAGCAGAGCTCGTGAATTTGTTTAAAGGAGTAGAATTGCACGGATCAAACTTCAGGGCTATCCTGAGTGCTTTCCCCTTCCATCCAAAGAGAACTTCAAGGGAATTGTATTTGAAATGGAGAAGCATAAAAAAACAGTCTGTGTGTGTGATGCAGTGTGCAGGTTCAAGATGA
- Protein Sequence
- LFAGMPVVFALLDRLAMSKNASQIISAFKEIINVLCSEERERHLFYLCRGVQKISAYLDHADQEVSEYAYYILGYTAGQHEEIKKSLTTGAMFDRLSDAIAAQQCAKGGLSSAIFLLSVVMVGNNLAHELVRESGCLSKLLHLFILMSRDSFLHKWQTGAVKTVLQKWCILCTALSVSINPSVSDANQAEARIVLPQVILIALMVLTHLIERCPNNCRVFSREGGPEIVVEVTQHLEGNTDIVNAANLLWQCIEEFTSATQDFTPLATHGHGNKGKSDVGVARTAEIPLAQLMRSGANMESIFSDSMTWKGQVPIIGRSTTSRSVSTKCTENVCSCASELNCLSELCEGNDCDKAEIQQCKGETSVISTSSNYSFKILSRLMSVCGKLFSNRNNSCAENLLGEKVNKTFNGKSSNTSREECRSCNNQQGFVYQNSVGVQTTPSISNKYKKFDAKFSNRSTSESKKETSLMTARKAAFSARNDSNRTEVRKARNLASSSHGNMNYNTWQNNIGKNSTSTPLKHRTSILATTPSKAYKDHSSCTPSTSSVRSDLLVCVRKFSEAELVNLFKGVELHGSNFRAILSAFPFHPKRTSRELYLKWRSIKKQSVCVMQCAGSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -