Choo002456.1
Basic Information
- Insect
- Clitarchus hookeri
- Gene Symbol
- RCOR3
- Assembly
- None
- Location
- NQII01001329.1:257922-289314[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.24 3.1e+02 0.8 0.0 20 41 41 65 38 68 0.83 2 3 4.2e-10 5.4e-07 28.9 0.0 3 46 126 169 124 169 0.97 3 3 1.5e-12 1.9e-09 36.7 0.0 3 46 382 425 381 425 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTTGCTGAGAGAAATACGGATAGTTTGAGAAATGGACGAAGATCGAGAGGACCTAGCCCAAATGGTCATGTTTCCGAGTCTAGTAGCGAAGAAGAAGGTGAGAAGATCAGAGTTGGCAGAGACTACCAAGCAATAGTCCCTGAATGCTTACCTGTGAATGAGCGAAGGCCAGAGCAGTGCAGCGAGCGAGCACTGTTGGTGTGGTCTCCAACCAATGACATTCCCGACCAGAAACTTGACGAGTACATCTCCCTGGCCAAAGAGAAGTATGGCTACAATGGCGAACAGGCGCTCGGCATGTTGTTCTGGCACAAACATGACCTGGAGCGGGCAATCAGCGATCTCGCCAACTTCACTCCGTTCCCGGACGAGTGGACTGTCGAGGACAAAGTTTTGTTTGAGCAAGCTTTCCAGTTCCATGGGAAGAGCTTCCATCGCATCAGGCAAATGcTTCCAGACAAGTCGATTGCGAGCTTGGTCAAGTACTATTACTCGTGGAAGAAGACTCGCAGCCGCACCAGCCTGATGGACCGGCAAGCCAGGAAGCTGGCCGTGCATCGCGAGGAAGGCAGCGAAGGCGGCTCCGAGCTCGGCTCCAACACAGACTCAGACTCCGACGAGAAGAAATGGACCATCCACAGAGGAATTCGTCGCAAGAGTGGCTCGCCTCCGCATCCTGCGCAGAATAGCGAAGATCCTGGGGGTCAGAAGGAAGGCGGGGAAGGAGGCAAGAGTGCGTGCTCCAACTGCGGAGTAGCATGCACGCACGTCCACGTCTCGCCCAAGGGCAGCATGTGCAGCACTTGCTTCCAGCATTGGAGGCGGACGGGCAGCATTCGGCCGACGACGGGGCCGGTGAAGCGGGACAGGCACTGCCACGTGCTGCTCCGCCACAAGCGCAAACCACCAAAGGGCATGTACATAAACCATGACGACCTGGTGGCGATGGCGTCTGGGCCCCCGAGCGTTGCCCCCTCCACCCAGGGCGAGCACATGCTGAAGGCGATGGACCGTGAGATAGTCTCGCTCAAGCGGCAGGTGCAGAACAACAAGCAGACTCTCAGTTCCTTCAAGCGCAAGACGAGCGAGGGCATCGACGAATTCCGCCCTGCCGACTCCACCAGCCGCATCAACGCCCGCTGGACCAATGACGAGCTGCTTCTAGCTGTGCAAGgGGTGCGCAAATATGGGAAGGACTTCCGTGCTATTGCGGAAGTGATTGGCACCAAAACTGAAGCTCACATGCGTAGTTTTTTTGTCAACTATCGACGTCGTTACAATCTAGATGCTGTTCTCAAAGAATTTGAATCAGAAAATGGGCCTATTGTCGACAATGATGAAAAGGATGAAAAGATGGAGACGGATGGAGTGTCGTCAGGAAGCGAACCCAGCACCCCTACGCCAGGGGCCAGTTCGCCCGTCACCGTCGGCCAGGGACACACCCCCGCGAAGCAGGCCTTCTCCAAGACCCCCATCACAGCCACACAGGCCACCAAATGA
- Protein Sequence
- MVLAERNTDSLRNGRRSRGPSPNGHVSESSSEEEGEKIRVGRDYQAIVPECLPVNERRPEQCSERALLVWSPTNDIPDQKLDEYISLAKEKYGYNGEQALGMLFWHKHDLERAISDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDRQARKLAVHREEGSEGGSELGSNTDSDSDEKKWTIHRGIRRKSGSPPHPAQNSEDPGGQKEGGEGGKSACSNCGVACTHVHVSPKGSMCSTCFQHWRRTGSIRPTTGPVKRDRHCHVLLRHKRKPPKGMYINHDDLVAMASGPPSVAPSTQGEHMLKAMDREIVSLKRQVQNNKQTLSSFKRKTSEGIDEFRPADSTSRINARWTNDELLLAVQGVRKYGKDFRAIAEVIGTKTEAHMRSFFVNYRRRYNLDAVLKEFESENGPIVDNDEKDEKMETDGVSSGSEPSTPTPGASSPVTVGQGHTPAKQAFSKTPITATQATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995150;
- 90% Identity
- iTF_00188980;
- 80% Identity
- -