Basic Information

Insect: Clistopyga incitator
Gene Symbol: Rreb1
Assembly: GCA_947507545.1
Location: OX382177.1:13934065-13942329[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0018 0.19 12.6 0.1 1 23 77 99 77 99 0.98

2 16 0.00011 0.011 16.5 0.3 1 23 113 135 113 135 0.98

3 16 2.2e-07 2.4e-05 24.9 1.3 1 23 141 164 141 164 0.98

4 16 0.8 85 4.3 0.0 2 23 260 283 259 283 0.91

5 16 8.1 8.6e+02 1.1 3.5 3 23 290 311 289 312 0.90

6 16 2.4 2.6e+02 2.7 0.3 1 19 367 385 367 387 0.89

7 16 0.1 11 7.1 0.1 1 23 502 524 502 524 0.97

8 16 4.1e-05 0.0043 17.8 0.1 1 23 533 555 533 555 0.98

9 16 0.0017 0.19 12.6 2.9 1 23 561 584 561 584 0.97

10 16 0.029 3.1 8.8 2.0 3 23 998 1019 996 1019 0.96

11 16 0.00064 0.068 14.0 0.1 3 23 1324 1344 1322 1344 0.97

12 16 0.89 95 4.1 6.5 1 23 1350 1373 1350 1373 0.97

13 16 0.056 6 7.9 1.2 1 23 1413 1437 1413 1437 0.95

14 16 1.8 1.9e+02 3.1 3.0 1 23 1598 1621 1598 1621 0.96

15 16 0.011 1.2 10.1 0.4 2 23 1657 1678 1656 1678 0.94

16 16 0.025 2.7 9.0 7.6 1 23 1684 1706 1684 1706 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0018	0.19	12.6	0.1	1	23	77	99	77	99	0.98
2	16	0.00011	0.011	16.5	0.3	1	23	113	135	113	135	0.98
3	16	2.2e-07	2.4e-05	24.9	1.3	1	23	141	164	141	164	0.98
4	16	0.8	85	4.3	0.0	2	23	260	283	259	283	0.91
5	16	8.1	8.6e+02	1.1	3.5	3	23	290	311	289	312	0.90
6	16	2.4	2.6e+02	2.7	0.3	1	19	367	385	367	387	0.89
7	16	0.1	11	7.1	0.1	1	23	502	524	502	524	0.97
8	16	4.1e-05	0.0043	17.8	0.1	1	23	533	555	533	555	0.98
9	16	0.0017	0.19	12.6	2.9	1	23	561	584	561	584	0.97
10	16	0.029	3.1	8.8	2.0	3	23	998	1019	996	1019	0.96
11	16	0.00064	0.068	14.0	0.1	3	23	1324	1344	1322	1344	0.97
12	16	0.89	95	4.1	6.5	1	23	1350	1373	1350	1373	0.97
13	16	0.056	6	7.9	1.2	1	23	1413	1437	1413	1437	0.95
14	16	1.8	1.9e+02	3.1	3.0	1	23	1598	1621	1598	1621	0.96
15	16	0.011	1.2	10.1	0.4	2	23	1657	1678	1656	1678	0.94
16	16	0.025	2.7	9.0	7.6	1	23	1684	1706	1684	1706	0.99

Sequence Information

Coding Sequence: ATGGGGAAACGGGGCAACGCCCTCGCCGCCAACGTCGCTGTAGCTACTTCCCCCACTCCGTTGAGCGAAGCGAGAGCGCAGCATCCCACTCGTGGCCGGCGAGTACTACGACAACAGCAGGAGCGACAACAACAGATGAGAAGACAACAGAGCATCGACACACCAATGATACACAGGGAGATGGCGCGTCATCGCCATTGGTCAGGAGCGGATCAACCGGACGGTACTTATTCCTGTCCGGCGTGCCCGATAGTTCTCTCGAGCCCCCACGAACTATCGAATCATCTTCGCGGTCACAATTCACCGCGCAGCACCGATTACAGTGGCGAGGACGATTACACGTGTGGCGTTTGTCACAAGGTATTGAGCTCGGCGAGTTCACTGGACCGTCACGTTCTCGTTCACTCTGGCGAACGTCCCTTCAAGTGCAAATACTGCGACATGGCGTTCACGACAAACGGCAACATGAACAGACACCTGAGAACCGCTCACGGCGGTCTCTCGCCTCGGGACAACAGTTACACGGATTCCGAGGCGAGCAGCGACTCGGAAAAGCCGTCTAACATCCGTCGCCACGTCGAGGAGGAATACAACAACAACGAAATAGCAAAAACGAGCTCACTCGATTTCATCGAACGGCGCGACTCTCCGCCGTTTTCCGGCAAACGAAAACGGGATTCGACGGAAACGGACGTCGAGGGTCAGAGGCATCACAAGATTCTTCTCGGAAACTCGAGAACCGAGATGAAGGCCAGTTTGATGGAGCCCCAGAGCCTCAGCTGTCCCGTTTGCGGCAGATTGGATTTCGCAACGATCGCTCTTCTCGAAACTCACTTGGAGAGAAACCATCCGCACTTCCCGGCTACGTGCGATCCCTGCAATTTATCCTTCAAAAATCACCGGGTTCTTAATCTTCACAAATTCATGGTCCACCACAACGAGAATCCTTACGGCAATAACGCGAGAAATTTACGAAATTCCATCGTGGGCTTTCACGATCTTACCTTCGTGGATTTCTCCTCCGACAAATTCCCGGCTATCGCGCGTGCCGTTTGCGAGCAATCGTTGCATCGTCCGGCCTCCGGTGAGATCGCGAAATTTCAGTGCGGAAAATGTCTCCGCGCTTTTCCATGCAGATCGGCTCTCGATGCTCACGAGATGGACTGCGGAGTGACGAACGCCCAAACTCGCGTAATCGGGGACGATCATTCGAGAAGAGACGACTTTTTTGCGGGTCTCGATCTGCAGAACAAAGCCGCACTCACCGAGGCAAAGGAGGGCAAGGATCTCGCCGATATACAGAGCATCATATCGGTAACATCCGGACCGATCCTCCAAAGCTTCCCGCGATCCGACGCGAGCACACCGGAACATCAGATTAAGATAAATCCTAACGTTGGCTCTTCCGGATCATCCGGCACACCGTCCTCCGAATATCATCAAGAGGAGGAAGCGCAGGATGCGTTCGCCGCCCAATTCCGCAAAATGAAGCTCAAAGGGGAATTTCCATGCAGATTGTGCGTCGCCGTATTTCCGAATTTACGAGCACTGAAGGGTCACAATCGTTCCCATATGGGGGTGGGACCGGGATCGCCGTATCCTTGCAACATGTGCCCATACACGAGCGCCGACAAAGCCACTCTCATTCGACATTTGAGATCTCACAATGGTGATCGTCCCTTCGAATGTTCTCTCTGTAATTATGCCTTCACGACTAAAGCAAACTGCGAGAGGCACGTGAGAAATCGTCATGGAAAGCTCACGCGCGAGGACATTAAGAGCGTTCTCATTTATCATCCCCACGAGGACTACACGAACGACGGTTCACTGGGGAGAAGCTCGCCACGTGGAATTCGCGAAGATGTACGCAAGAGTCTAGTCTATCCGAACGAGCGTGACGAGTATTCCCATCAACAGGCCATCTATCCTAGCATGCCTATGGAAGCTAAGCACGATCTGGGCAGCGTCTCGGACGATGGACACATTCGGCCACCGATGGGTATCCAAACATCCCGCGGAATCTCTTCCCTTGGCCATTACGAGAGATCCGAGAGCTTATCGAGAACACCGAGTCGTAGTGGGCATTCCCTCGATCTAAAGAGCCACAGAATGAGCCAGCACAACGACAAATCTCGCAATGAACTCATCGCGAGTTCTGATTTCAGTGGCAAACTCGAAGACGACATGGACTCGAGATCCTCGGAGGACGGAAGCGTTTCTCTAGTCAGCGATACCAAATCCGATGCGGCGCACCAAAGAATCCAAGCTAGTCCTATGGACTTGAAGAAAAATCCCGTGGCCATCGCCGCGGCGGCACCGAATCCAGTTGAAAATTCCGCGTCGGCCACCGGCGAAGACGCGCCGCTCGATCTCTCGATGGACGCTCTCGATCTGAGCAAAAAATCAAAAGACGACAACAACGCCGCTGACCCGGCCGTTAATTCCGAGGATATCGGCAGAAATCAACGAGAATTTTACGACGCCACTAATCGATTTCTAATTACGCAGGCTCTTTTGAAGACTGGACAAAGCCCAAATCCTGCAACCTCGTTCGAAGCTCTCTATGCAAGCGCTCACATGATATACAGCAACTTGGGAAGTTTCCCGACTGTCGGTGCTGGAATTATTCCGCCTTATTTGTTCAATCCTCATATGTTCAGCCAGGATTTCGCCGTCAAGGATAGATTGGAGAAGGAATCGGTTCGCGGATTGCAATTGACCAGCGGTGGAACTCTCGTTGAGCCGCCGACAGGAAGTACCGCCGCCTACACCGGTGCCTATCCTCAAGGCAAAGATATTACCGCACACTCGATGAACAAACAGAGCGTTTTCGACGGTCCCGTGTCCTTGAAGTTGGGCAAAAAAATTATCAGCCCCAGAGAAAAGATGAACAGGTCTCCGTTAACGAATTCCTTAAAAATGGTTCTCAAGAACGGAGTTTATATACCAAAGCAAAAACAACGAAGATACAGAACCGAAAGACCGTTCGGATGCAACCATTGCGTCGCGCGATTCACACTCCGAAGCAACATGGAGAGACACGTCAAACAACAACATCCGTTCCACTGGAAAATGAGGGCCAGAGGAGGTCACTCGACCAGAGGAAGACCAAAGGCGAAGTCACCGACGCTTTTGCAAAACGCTAAATTATTGCCGCTCACTTATCCAAGCATCCTTCCGAAAATCGGAGAATTATCCGACGGTTACGAAAAACATGCCATTTCCGATCAAGTGAAATACGCGATTCTCGCGCAACAGTTGAAGGGCAACAAGATCGAGGAAAACGATACCGAGGAAGAATTGGTCATCGACGAAGGTGCCAATGACAGAGAAACCGGAGACAACAAGGAGACGGTGGAGAGTGAACGCCCGACGAGCCTCTTGAGAGGCAAACTCGAGGGTAGCAATTTGTATCAGGACACGAGCTCGGGGCCGATGAAACGGCAACGATCAGCTTGCGAAATGATTCAACAAATCATCGCCAACCACAAAAAGAGGCGCGTCGAGAATGACGACGAGAACGAAGGTGACGAGGAAGCCGATTGCTCGGCCGATGATTTGTCCACTATCAAGGTCAAAGTTGAGGCCGCCGAACACGAGCAAGAGGATGATTCCAAAGATTGCGCGCCCAGCGAAACGTGCGCCACGGAAATTGCCAAGGACGAGCAATGCTCCCGCGACGACACGACGAGCGAAAGGAACGAAGATGGCGCGGCCGATCTCGCGAGTGTCTCGGAATTGTTGGACAACGCTTCGCAACAGTATCAACAATTTCAGCCGCAATACATGAGCGACGAGGAGGGACTCGTTGCTTCCACCAGCGACTGCAACAATTCCGGCAGCGATGAAAAATCCGATTCCATCAATTCGGCTAATTCAGCAAACTCGGACTCGTCGTCGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGTCGGCTTACTCAATGGCACCAAACAGGGTTATATGCCCGTACTGCGAGAGACCTTTTCCGTGGACTTCGTCACTCAGACGTCACATCCTCACACACACTGGACAAAAACCGTATCAGTGCATGCATTGCTCACTTCTCTTCACGACTAAATCCAATTGCGACCGTCACTTGCTGAGGAAACACAAGAACAACGCGAACAAAAGTCGTCGAATGAGAAATTCATCGTCACCGGAAGCACAGGAACAACCCTCCAATCCCAACAGCAATGCGTTCGCCATGAGAAACGTGCCGGAAAGGCCTTTCAAGTGCACCTTGTGCCCAAGCTCGACCTTCTCTACCGTTGGCAATCTTAACAAGCACACATCATCGAAACACCCGAGCGGTTTTACATCCAACAGGCCCGAGTCACCGGTTACCAGCGAACCTCAAAATAGTCCAATGACTTGCAACAAGCATAACGATCAGAGTGGCTATGAGAGTCAATCGTCCGGAGTTTCGGACAACATGGAACAAGAGGAGAATACGGAGGTCATGGAAAACGGTGAAGCACATGCCCAGAATTTGGAAAACTCGAAGGTAGTTGAAAAAACTCAAGTTGTCGTGAAAACGGAAGCGCCTATGGAATGTAACGAAATCGTGAGAGAGCCTGAAAATGTCGAGACGACAACGACTGATCAGCAGGAACAACCTCAACACGTCGATAACGTCGAAACTACGGAAACCATCGATGCCGCTTCTTCCGCGTTGGACAACACCGCAACGGAAAATGCCGATAACAACCCTACCAACACGAGCGAAGCCTCCAAATCTCGAAGGCCATCGCCAAGGTCATCGCCCGGGCCAACCGACGTACCTTTCAAGTGCCATTTGTGCGAGAGCGGGTTCTCCGAACGTCAAGATTGTCTCGAACACATCAGGATCAATCACACGCGCTCCTACGAGATACTCGTTGAGAGGAGAGCGCTCGATATGGACATCGAGACTCCGGAGGAACAACAGCAACCACCGTCGCATTACAGCAATCGAAAGGTCGTTTGTGCATTCTGTATGCGTCGTTTTTGGTCAGCGGAGGATCTCCGACGCCACATGAGAACTCACACCGGAGACAAGCCGTTCAAGTGCGACATCTGCCACCGACTTTTCACTCTGAAGCACAGCATGCTTCGACATCGAAAGAAGCACGAGTCCGCGGACTCGAGTATGTACGTGGGAACGAGCGGTGACGAAGAGTCTGGGCCATCGCAACCGCCGACGATAACTCCGCGAAGTCAACAGCAGCAGGCATCTTTGATTAGCACGACGAGCGGTGAGTCTCGGATTCAGGAGAGGATCTCTTTGCCAACAGTGGCGACAGTAGCCACAGGCGACGCCGCGCCCAGTTCCCTCGTGCGTTTCAATCCCTACGAGAAGCTCACGACTCTCACGGGAAAACTGGCAAACGCCCAGCAACATTTCCATTCCCACGACGGAACTGACACCGAAAACGACCTCATCTCCAATCTCCTCGGTATTCGCGACAAGAGCATCATCGACAAGGTGCTCCTAGCATCGGCCGATGACGCGGCGAAGCTTCTCGGCGTTAACAGGAATCACGACTGA
Protein Sequence: MGKRGNALAANVAVATSPTPLSEARAQHPTRGRRVLRQQQERQQQMRRQQSIDTPMIHREMARHRHWSGADQPDGTYSCPACPIVLSSPHELSNHLRGHNSPRSTDYSGEDDYTCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGLSPRDNSYTDSEASSDSEKPSNIRRHVEEEYNNNEIAKTSSLDFIERRDSPPFSGKRKRDSTETDVEGQRHHKILLGNSRTEMKASLMEPQSLSCPVCGRLDFATIALLETHLERNHPHFPATCDPCNLSFKNHRVLNLHKFMVHHNENPYGNNARNLRNSIVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIAKFQCGKCLRAFPCRSALDAHEMDCGVTNAQTRVIGDDHSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQSFPRSDASTPEHQIKINPNVGSSGSSGTPSSEYHQEEEAQDAFAAQFRKMKLKGEFPCRLCVAVFPNLRALKGHNRSHMGVGPGSPYPCNMCPYTSADKATLIRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPHEDYTNDGSLGRSSPRGIREDVRKSLVYPNERDEYSHQQAIYPSMPMEAKHDLGSVSDDGHIRPPMGIQTSRGISSLGHYERSESLSRTPSRSGHSLDLKSHRMSQHNDKSRNELIASSDFSGKLEDDMDSRSSEDGSVSLVSDTKSDAAHQRIQASPMDLKKNPVAIAAAAPNPVENSASATGEDAPLDLSMDALDLSKKSKDDNNAADPAVNSEDIGRNQREFYDATNRFLITQALLKTGQSPNPATSFEALYASAHMIYSNLGSFPTVGAGIIPPYLFNPHMFSQDFAVKDRLEKESVRGLQLTSGGTLVEPPTGSTAAYTGAYPQGKDITAHSMNKQSVFDGPVSLKLGKKIISPREKMNRSPLTNSLKMVLKNGVYIPKQKQRRYRTERPFGCNHCVARFTLRSNMERHVKQQHPFHWKMRARGGHSTRGRPKAKSPTLLQNAKLLPLTYPSILPKIGELSDGYEKHAISDQVKYAILAQQLKGNKIEENDTEEELVIDEGANDRETGDNKETVESERPTSLLRGKLEGSNLYQDTSSGPMKRQRSACEMIQQIIANHKKRRVENDDENEGDEEADCSADDLSTIKVKVEAAEHEQEDDSKDCAPSETCATEIAKDEQCSRDDTTSERNEDGAADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSINSANSANSDSSSKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKSRRMRNSSSPEAQEQPSNPNSNAFAMRNVPERPFKCTLCPSSTFSTVGNLNKHTSSKHPSGFTSNRPESPVTSEPQNSPMTCNKHNDQSGYESQSSGVSDNMEQEENTEVMENGEAHAQNLENSKVVEKTQVVVKTEAPMECNEIVREPENVETTTTDQQEQPQHVDNVETTETIDAASSALDNTATENADNNPTNTSEASKSRRPSPRSSPGPTDVPFKCHLCESGFSERQDCLEHIRINHTRSYEILVERRALDMDIETPEEQQQPPSHYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGDKPFKCDICHRLFTLKHSMLRHRKKHESADSSMYVGTSGDEESGPSQPPTITPRSQQQQASLISTTSGESRIQERISLPTVATVATGDAAPSSLVRFNPYEKLTTLTGKLANAQQHFHSHDGTDTENDLISNLLGIRDKSIIDKVLLASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -