Basic Information

Insect: Clistopyga incitator
Gene Symbol: prdm10
Assembly: GCA_947507545.1
Location: OX382184.1:47774-52429[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0078 0.83 10.6 0.6 2 23 513 534 512 534 0.95

2 14 4.4e-08 4.6e-06 27.1 1.3 1 23 568 590 568 590 0.98

3 14 0.0094 1 10.3 2.1 1 23 598 621 598 621 0.97

4 14 0.022 2.4 9.1 0.1 2 23 674 695 673 695 0.95

5 14 0.004 0.42 11.5 0.4 2 23 708 729 708 729 0.97

6 14 0.00074 0.078 13.8 1.5 2 23 747 768 746 768 0.97

7 14 0.0069 0.73 10.7 1.6 2 23 777 798 776 798 0.96

8 14 0.025 2.7 9.0 0.1 1 23 805 827 805 827 0.98

9 14 0.00014 0.015 16.1 3.2 1 23 834 856 834 857 0.96

10 14 0.0035 0.37 11.7 2.8 1 23 862 884 862 884 0.98

11 14 0.00011 0.012 16.4 4.7 1 23 890 913 890 913 0.96

12 14 0.0043 0.46 11.4 1.9 1 23 946 969 946 969 0.97

13 14 0.00014 0.014 16.1 2.0 1 23 991 1014 991 1014 0.95

14 14 0.0016 0.17 12.7 3.4 2 23 1051 1073 1050 1073 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0078	0.83	10.6	0.6	2	23	513	534	512	534	0.95
2	14	4.4e-08	4.6e-06	27.1	1.3	1	23	568	590	568	590	0.98
3	14	0.0094	1	10.3	2.1	1	23	598	621	598	621	0.97
4	14	0.022	2.4	9.1	0.1	2	23	674	695	673	695	0.95
5	14	0.004	0.42	11.5	0.4	2	23	708	729	708	729	0.97
6	14	0.00074	0.078	13.8	1.5	2	23	747	768	746	768	0.97
7	14	0.0069	0.73	10.7	1.6	2	23	777	798	776	798	0.96
8	14	0.025	2.7	9.0	0.1	1	23	805	827	805	827	0.98
9	14	0.00014	0.015	16.1	3.2	1	23	834	856	834	857	0.96
10	14	0.0035	0.37	11.7	2.8	1	23	862	884	862	884	0.98
11	14	0.00011	0.012	16.4	4.7	1	23	890	913	890	913	0.96
12	14	0.0043	0.46	11.4	1.9	1	23	946	969	946	969	0.97
13	14	0.00014	0.014	16.1	2.0	1	23	991	1014	991	1014	0.95
14	14	0.0016	0.17	12.7	3.4	2	23	1051	1073	1050	1073	0.96

Sequence Information

Coding Sequence: ATGGATTCGAGGGGCCCTCCCGAGGGGGGCCCTATTGACCCACTCGTTTTACCAATTATCGACAAGTCCTCCGAAATATCGGACAATTGGTCGGCCAGTAATTTACTTGCCTCGACATTCGGTGATCAAACTAGGAAAGTCAACGGCAGCAGCAACACCACCACCAACAACAACAACAACAACAACAACAACAACAACAACAACAATAACAACGCACTGCTCTTTGTTACTGTCGGCTATATGGAAGATCAAAGTCGAGACTACTCCAAGATGTTCCCGGCGTACGAGCCGGTACCTTTTGCCTCTCATCCGGCATCTCCGCTCTCCGATTTTGAGCAACGAGTGAGCACGTTGGATCCCAACATGAGCTCAGCGGCGAGATATTCTCCGACGCCCGTACCCCTTCCGCCTTTGCCGTTTCCCAATTCCGTCGTGGTTCTTCAAGGTCCACCGTCGCCGTTTGTCGCACCAGCGGAGAGTAACGCCAGATCCAACATCAATTTTGCACAGAATCAAAACTGCGATCGGAATATACCACAGGCAGACGTCGTCGGTGACTTTGTTACCAATGGCAATGATAGTTTAACTTCCGGCGTCAGTGGAGAATTGATCTTGATGCAAGGTGGAAATTCGGAATTGGAAGGATCAGTCGGTACACCACTGATGCTCACCGGTATTCCCGGTGGGGAATTTGCCTTGACAAGGGAATTTCTCGTAATGCAAGACGATCAAATAAACGTAATGGGGGAGAGTCTGAGAAATGAGGAAATGAGTGGCGGCGATCGGACAGTGTCGGTCGTGTCACAGACAATTTGTCGTATGGAGGAAGAGAAGATTGTTTCGCCGGAGAAGAATGCCGCGAGTGACGATAGCCAGGAGAGAGCGATGCCGAGGAAAGAAGTTGAGAAAATAAATACGGAACGGAGTGTGATAAGACGATCGAGACGTCAGATAAACGATAAAAAGACGTTTTGGTGCGAGGAATGCGAGTCCGGTTGTCACAAAGCAGGCGGTGGGGGCTGTACGTCTTCGAAAAATGTACGGACGATTGCCGATGAGCCGGTGCCTTCGCGCGCTATTGCCACACTACCGGGCTCTTATCTCTCCATCGACAAATTACCCTCGTCGAACCTATTGCCGGGAGGCAATTCGACCTTTGGCGTTTTTGCCAAACGTAATATTCGCTCGCGCACTCAATTTGGTCCGATCGAAGGAATTCTATGGCCGTATTACGGCACACCGTTTGACAATGTTTTACCGTTGCTCTACGAAACCGAGAGCGGAGAATTCATGAAGATCGATGTATCCAATGAAAATGCTTCCAACTGGATGCGTTTCGTTAGGCCTGCGACAACATACAAAGAACAAAATCTGGGAATTTGTCAGCAGGCCGACGGCATAGTTTTTCTAACGACGAGAAACATTTTACCCAAGGAGGAACTGAGAGCCGGGCCTAATCCAGAATACGCGATACGCAGAAACTTGCCAATTCTCCAGCCTGAAGTGAAAGACGAATCAAGTGAGACAAGGGTATGGCCGTGTTTCGAGTGCAATCAGCGCTTTCTGACTTCCGAAAAGCTTCAAAAACATCTCACCGTTCATGAAAATACAAAACCGGAAAACAAATCGAGAATGAAGCGAAAAAAAGTAGCCGTTTCGACAAACAAATTATTGAAAGTCGTCGATGGGCAAACGCTGTTGTACACTTGTCCGCACTGTCCAAAGGTATTTCCACGAAGTTACAGTCTAAAGCGGCACTTGTTGATACATCCGGGGGCAAAAGCACCGCGATACGAGTGCTCCTCGTGTGGAGAAAACTTTTTACACCCATACAATCGCAGTCGTCATATGAAGATATTTCACGGTGGCGgcggtggcggcggtggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggttccggtggtggtggcggtggcaccggcggtggaaCGAAGGAAAAGGAAAATTCACGACAAAATTCAACCGAGTGGACGTGCTCGACGTGTAATCTCATATTTGGCAAAGCGAGTTTACTCGCTATACATACACTGGGCCATTCGAGCAAGAGCATGGTGGGTGAAACGTTCGGAAATCGTTGTCCGCAATGTAACGAGCAATTAAAAACGCGCGGTGAATTGATAAGTCATGTTTCGAAACATGCTCGCTTAAAATTACCAAAATCAACGAAAATGACACCGCTCGCATCGAACAAATGTAGCATGTGTTACAAACGTTTCGCCACCAAAGTCCGATTACAACAACATTATTTGGTGCACGGTGCCGAGGACCAAAAGCCACTGCCATGCAACATTTGCGCCAAACGATTTATGAACAACTCCGCGCTCTCGTGTCATCTCAAAACTCACAGGGAAGATAAACAGATATTCGAATGTCCAATGTGCCGAGAGCTTTTTGATCAAGTATTAATGTTAAAAGATCATATCGAAAGACATCGAAACGAAGACGAGACTTTTACTTGTCCGCATTGTCCTCGAAGTTTCGTCAAGTATTCGGTTATTCGCAAGCACATACGAGCTCATCATTGCGAACGAAAGCACAAGTGTCAATTTTGCGCAAAGCGATTTCCCACTGTCGACAAACTGCGAATGCATTTGCTGCGCCATTCGGACCACAGAGAATTTCATTGTGCAAACTGCGAAAAACGATTTAAGCGCAAAGACAAACTCAAGGAACACATGACGAGGATGCACAATGCGCAAAGAGTCAAGCGCGATGAGCTATCGCGGAACAACCAAATTAAGAAATTTGTACCCAAGGTTAATCCAACGGATTACAATCGCTTTGTCTACAAGTGTCATCGATGTCTCGTTGGTTTCAAGAGACGAGGTATGCTCGTTAATCACTTGGCAAAACGTCATCCGGACGTTGCCCCTGAATCGGTTCCGGAATTGAACTTGCCAATTTTACGTCAAACACGAGACTACTATTGTCAATATTGCGACAAGGTGTACAAAAGCAGCAGCAAGAGAAAAGCGCATATCGTGAAAAACCATCCTGGAGCGGCTCTGCCTCCGAGCAATCGTCACAAAGAGAGCGATATCGTTGGTTTGCCGAACCCAACATTCAGTCAAACGGTGGGAAGCATAAGAACAACGCCACAGAGTTGTCAATGGTGTCACAAACAGTACGCGAGTAAGGCCAAGCTTCTTCAGCATCAACGAAAGAAACACTCGGCATTAATGGCGCCGGCCGATCAGGTACCCCGATCGCGAACTCGAGCATTTCTCAAAGGTAGACAGATGCAGACCGATAATATTGACGATCGAGATTTTATCATAAGCGAATACGTAGATGACTGCAATGCCGATACACATCAATTTACCAAACCTACGATAATCAAGATATCCACTGGCGTTGATACGATAGCCAACGATCTCGAAATGGTCGCTCAGCAGTTTGTACGTATGCGGGACATACGTTGA
Protein Sequence: MDSRGPPEGGPIDPLVLPIIDKSSEISDNWSASNLLASTFGDQTRKVNGSSNTTTNNNNNNNNNNNNNNNNALLFVTVGYMEDQSRDYSKMFPAYEPVPFASHPASPLSDFEQRVSTLDPNMSSAARYSPTPVPLPPLPFPNSVVVLQGPPSPFVAPAESNARSNINFAQNQNCDRNIPQADVVGDFVTNGNDSLTSGVSGELILMQGGNSELEGSVGTPLMLTGIPGGEFALTREFLVMQDDQINVMGESLRNEEMSGGDRTVSVVSQTICRMEEEKIVSPEKNAASDDSQERAMPRKEVEKINTERSVIRRSRRQINDKKTFWCEECESGCHKAGGGGCTSSKNVRTIADEPVPSRAIATLPGSYLSIDKLPSSNLLPGGNSTFGVFAKRNIRSRTQFGPIEGILWPYYGTPFDNVLPLLYETESGEFMKIDVSNENASNWMRFVRPATTYKEQNLGICQQADGIVFLTTRNILPKEELRAGPNPEYAIRRNLPILQPEVKDESSETRVWPCFECNQRFLTSEKLQKHLTVHENTKPENKSRMKRKKVAVSTNKLLKVVDGQTLLYTCPHCPKVFPRSYSLKRHLLIHPGAKAPRYECSSCGENFLHPYNRSRHMKIFHGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGTGGGTKEKENSRQNSTEWTCSTCNLIFGKASLLAIHTLGHSSKSMVGETFGNRCPQCNEQLKTRGELISHVSKHARLKLPKSTKMTPLASNKCSMCYKRFATKVRLQQHYLVHGAEDQKPLPCNICAKRFMNNSALSCHLKTHREDKQIFECPMCRELFDQVLMLKDHIERHRNEDETFTCPHCPRSFVKYSVIRKHIRAHHCERKHKCQFCAKRFPTVDKLRMHLLRHSDHREFHCANCEKRFKRKDKLKEHMTRMHNAQRVKRDELSRNNQIKKFVPKVNPTDYNRFVYKCHRCLVGFKRRGMLVNHLAKRHPDVAPESVPELNLPILRQTRDYYCQYCDKVYKSSSKRKAHIVKNHPGAALPPSNRHKESDIVGLPNPTFSQTVGSIRTTPQSCQWCHKQYASKAKLLQHQRKKHSALMAPADQVPRSRTRAFLKGRQMQTDNIDDRDFIISEYVDDCNADTHQFTKPTIIKISTGVDTIANDLEMVAQQFVRMRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207577;
90% Identity: -
80% Identity: -