Basic Information

Insect: Clistopyga incitator
Gene Symbol: -
Assembly: GCA_947507545.1
Location: OX382187.1:1468589-1472135[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0068 0.73 10.8 0.0 1 23 364 386 364 386 0.96

2 11 5.8e-06 0.00062 20.4 1.2 3 23 462 482 461 482 0.97

3 11 0.0001 0.011 16.5 0.2 1 23 488 510 488 510 0.98

4 11 0.0004 0.043 14.6 2.4 1 23 516 538 516 538 0.98

5 11 7.2e-06 0.00076 20.1 1.3 1 23 544 566 544 566 0.98

6 11 0.00028 0.03 15.1 1.3 1 23 572 594 572 594 0.98

7 11 1.5e-07 1.5e-05 25.5 0.5 1 23 602 624 602 624 0.98

8 11 0.0048 0.51 11.2 0.2 1 23 630 652 630 652 0.94

9 11 1.6e-05 0.0017 19.1 2.2 1 23 658 680 658 680 0.98

10 11 2.1e-05 0.0022 18.7 0.6 1 23 686 708 686 708 0.98

11 11 0.0012 0.13 13.1 4.3 1 23 714 736 714 737 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0068	0.73	10.8	0.0	1	23	364	386	364	386	0.96
2	11	5.8e-06	0.00062	20.4	1.2	3	23	462	482	461	482	0.97
3	11	0.0001	0.011	16.5	0.2	1	23	488	510	488	510	0.98
4	11	0.0004	0.043	14.6	2.4	1	23	516	538	516	538	0.98
5	11	7.2e-06	0.00076	20.1	1.3	1	23	544	566	544	566	0.98
6	11	0.00028	0.03	15.1	1.3	1	23	572	594	572	594	0.98
7	11	1.5e-07	1.5e-05	25.5	0.5	1	23	602	624	602	624	0.98
8	11	0.0048	0.51	11.2	0.2	1	23	630	652	630	652	0.94
9	11	1.6e-05	0.0017	19.1	2.2	1	23	658	680	658	680	0.98
10	11	2.1e-05	0.0022	18.7	0.6	1	23	686	708	686	708	0.98
11	11	0.0012	0.13	13.1	4.3	1	23	714	736	714	737	0.95

Sequence Information

Coding Sequence: atggccgttgtcggagaattcgattatttgtgtcggctgtgcgccaccaaaaccggaattctcatgggcctaccgatcttcgaagccggcgaacgcatgagaaacatcgacaagaaaatcgccgcttgtctgccagttcagGTGTCGATGAGCGATCAGCTGCCAAAAGTCGTGTGCGAGCAGTGCGCTTACAAGTTGGATCAGATGTTTGACTTCAGAGAAAAATGCGTCAACACGGAGAACATGTTCATCGAGATGCTTAAGGAGATAAAGGTGGAGGATGGAAGAATAGAGCGAACGTTAAGGGGAGTCGAGGAAATTCCAGTTATTCGTAACAGCATCGACAGGATTCATTGCGAAATGGCTGATATTCAGAGCGGGATAGCCGATATCACGAATAACGAGTGCGGCACGCATTCGGAGGCCAGCGAAAACACTATTCACACGATGCAGGTGATGGACGAAATGGATTTGGCCGGTGGCGAACAGGTCGTCAGCCAAGAGGAAATAGGAGCTCAAGAAACGGACATAGAAGTAACAGGCATCGACTGTTTGGACGGCGATACCGTGAGAATGGTGGATGAACACATGCGCGAAGTCTCGAATCACGAGATTACAATGCATTTGGAGGGAGACATGACCGTCGTAGGAAATTTGACCGTTGACGATCACCTCACTCAGCTTGAAATAAATTACGTAACGACTATCGGACCCGAGAGCCAGAGTCAGGAACAAATCGTCCATTACTGTGACAACGTCAAATACGAGGCTGTGACCGTGAAAAATGAGTACCAGAGGCTACAGGAGAGACTCACGGCGGAGAGTTCGCATTCTACAAAAAATAATGTGGCGACCGACAGTTTTACCACGCCGCATCCAGAACCCGGAAGCGAGCTCGAGGAGCCGTCAATCAGCGAGACCGAGAACCACACGACGATGGACGGTCTGCACTCCGAAAGTATGGCATCGACGTCCCAAGTGAATTCCAAAGATTCCAAGATAATAGTCGAGTACACGAAAACCGCGAAAGACTCTGTGTTAGAAAATATACTTAACAATCCGACGTTCGACGAAACGGGATCGAATTGGTACGTGTGTCCTTTTTGTAACGAGGCAGCGGCCGATCCTGGCAGTCTTGCCACGCATCTCGATCAGCATTTCTGCTGTTGTCCGTGCGGTCTATACTTCACGAGCGTCGAGGTTCTGACGCTTCACGAAGGCGAATGTGATTTGAATAAAAGAAGAGACGAAGAAGTTGCGAAAGAAGAGAAACCGGCGGGCGAAGCGGTGATCGCGGCCGTCGAGTTGGAGTCGATCCCCGAGGAGACAGCGGACAACGGCAAGAAGCAGCCGAACGTGCGGCAAAAATGGACACCTaaaatttgcgcccaatgcggcaaacaatatcgtacaaattacaaacttcaggagcacatgcgaaagcacacaggcgagaaacccttccagtgtcttctctgcgagaaagcattcagaagcaaaatcggtttggcgcagcacacagcgacgcacaccggcgaattcgactacaattgttcgacgtgcggcaaaggtttccagtgcaaaagctatctcattgtccaccaacgcgtccactccgacctgaagccctatccttgcagcacctgcggccaaaatttcaagaccaaacaatcgttgctcgatcaccagaatcgtcatctcggagttaagccctacatgtgcgaaatttgtggccgaggttttattaccaagggtctgtgcaaaagccaccaaaagattcattccggtaaggataatcgtcagtatccttgcgaggtttgcaacaagatgttcgtcagcaaaagctacctaaacactcatttgcgtatccacaccggcgaaaaaccgtatttgtgtgaagtttgcggaaagggttttctcacgcgtgtcgatttgaagattcactcgactatgcacaccggagaaaagagcttcaagtgcgacatgtgcggcaaagtttttgcgcggcgcgccgcgcttcgatgtcacagaagatcgcacacaggcgaacgtccttacagatgcgatgtttgcggcaaaaccttcactcaattcagcccgatggcgatacacaaacgtctgcacaccggggaacgtccttacgagtgcgatgtatgcggcaaagccttcgtttcgcgatcgactatgatgtgccacaggaaaaagcatcatttgccgatcaccgCAACGACCAAAGACGCGTCCGCGAATTGCGAGGAAAAAGATGGCAAAGGAATCTCCGTGGACGGTGTCGTGCACAGCGGAGGAGTGGACGATAGTGTTTCGATAAAAGCCGATTGA
Protein Sequence: MAVVGEFDYLCRLCATKTGILMGLPIFEAGERMRNIDKKIAACLPVQVSMSDQLPKVVCEQCAYKLDQMFDFREKCVNTENMFIEMLKEIKVEDGRIERTLRGVEEIPVIRNSIDRIHCEMADIQSGIADITNNECGTHSEASENTIHTMQVMDEMDLAGGEQVVSQEEIGAQETDIEVTGIDCLDGDTVRMVDEHMREVSNHEITMHLEGDMTVVGNLTVDDHLTQLEINYVTTIGPESQSQEQIVHYCDNVKYEAVTVKNEYQRLQERLTAESSHSTKNNVATDSFTTPHPEPGSELEEPSISETENHTTMDGLHSESMASTSQVNSKDSKIIVEYTKTAKDSVLENILNNPTFDETGSNWYVCPFCNEAAADPGSLATHLDQHFCCCPCGLYFTSVEVLTLHEGECDLNKRRDEEVAKEEKPAGEAVIAAVELESIPEETADNGKKQPNVRQKWTPKICAQCGKQYRTNYKLQEHMRKHTGEKPFQCLLCEKAFRSKIGLAQHTATHTGEFDYNCSTCGKGFQCKSYLIVHQRVHSDLKPYPCSTCGQNFKTKQSLLDHQNRHLGVKPYMCEICGRGFITKGLCKSHQKIHSGKDNRQYPCEVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCDMCGKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECDVCGKAFVSRSTMMCHRKKHHLPITATTKDASANCEEKDGKGISVDGVVHSGGVDDSVSIKAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207572;
90% Identity: iTF_00653042;
80% Identity: -