Basic Information

Insect: Clistopyga incitator
Gene Symbol: -
Assembly: GCA_947507545.1
Location: OX382187.1:3788755-3791988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7e-05 0.0074 17.0 1.3 1 23 110 133 110 133 0.97

2 14 0.092 9.8 7.2 1.9 1 16 139 154 139 156 0.90

3 14 0.0085 0.9 10.5 0.9 1 23 224 246 224 246 0.91

4 14 2.2 2.3e+02 2.9 1.9 1 20 284 303 284 304 0.79

5 14 0.0042 0.45 11.4 2.6 1 23 327 350 327 350 0.97

6 14 0.0014 0.15 12.9 4.7 2 23 389 410 388 410 0.97

7 14 0.0059 0.63 10.9 3.9 1 23 419 442 419 442 0.97

8 14 0.015 1.6 9.7 1.7 1 23 457 480 457 480 0.95

9 14 4.1e-07 4.4e-05 24.0 0.8 1 23 486 509 486 509 0.96

10 14 0.014 1.5 9.8 0.8 3 23 516 537 514 537 0.94

11 14 0.0018 0.19 12.6 0.4 1 23 542 565 542 565 0.97

12 14 2.3e-08 2.5e-06 28.0 0.4 2 23 572 593 571 593 0.97

13 14 6.6e-07 7e-05 23.4 0.5 1 23 599 621 599 621 0.97

14 14 4.1e-07 4.4e-05 24.0 0.1 1 23 627 649 627 649 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7e-05	0.0074	17.0	1.3	1	23	110	133	110	133	0.97
2	14	0.092	9.8	7.2	1.9	1	16	139	154	139	156	0.90
3	14	0.0085	0.9	10.5	0.9	1	23	224	246	224	246	0.91
4	14	2.2	2.3e+02	2.9	1.9	1	20	284	303	284	304	0.79
5	14	0.0042	0.45	11.4	2.6	1	23	327	350	327	350	0.97
6	14	0.0014	0.15	12.9	4.7	2	23	389	410	388	410	0.97
7	14	0.0059	0.63	10.9	3.9	1	23	419	442	419	442	0.97
8	14	0.015	1.6	9.7	1.7	1	23	457	480	457	480	0.95
9	14	4.1e-07	4.4e-05	24.0	0.8	1	23	486	509	486	509	0.96
10	14	0.014	1.5	9.8	0.8	3	23	516	537	514	537	0.94
11	14	0.0018	0.19	12.6	0.4	1	23	542	565	542	565	0.97
12	14	2.3e-08	2.5e-06	28.0	0.4	2	23	572	593	571	593	0.97
13	14	6.6e-07	7e-05	23.4	0.5	1	23	599	621	599	621	0.97
14	14	4.1e-07	4.4e-05	24.0	0.1	1	23	627	649	627	649	0.98

Sequence Information

Coding Sequence: ATGCCGAAACAAGAAACTTTAACAACGTTCGCCACTGAAAGAAAAGCGACTGATGAAGAAAAGTTGAACAGAGCTGCTCACGATATTCCTTCGAGACTTCGTCCAATGTCAGCTAAGTTAAAAATCTCAACGAGGCCTAGAAAGAAGCGAAATCCGCCGCGGTATCACCAACATTCGAAATTGGAGGATACCGAAGAGATTTTAAAGAATCCCGAGCGAAAGGAGAGTCTCGCGGCTCTGGAATTTCGCATAAACGACAAGAACTTGGAACCCGAGGAGGAGGATCGTGACTGTGATGCCTTGTACAAGAAGCTGAACGACGGCAAATacacctgcgacatatgccagacgagtttcgagcagaagagcaaaatccttcgtcacataaccagcaagcacagctttcatcggcccttcaagtgcttcttgtgcacaaaagccttcaaAAGCTGGAGAAAATTTAGTGACCTGCCCTCGAAATGTGATGACTACGAGCAACAACATTACGGGAAGAGTGTCGTTCCTGTTGGAACGTGGCAACGAATGGACTCCAACGGCGAGGTGGACAACACCATTGATCCTCTGCTGCAGTCAGAATTCAAGATAGAAGTCGTTGAAGAAATGTCAACATCAAAGAAAGAACGTCTCTGTGGAAAGCCAGTCGAGTGGCACAATTGCGACAAATGCGGCCTCAAATTTCCGCTGGAAACTATGCTTAATCGTCACAAGGTCGCCCATAATTACAGCAGCGGAATAAAAAAGATGAAGAAATCGGTGGCTCTTTCGTCGAAGGCAGAAAAGTCTAACAAATCAAAGAGCGATCTTGAAGTTTCATCCCCAGATCTGAAATACAATTGCACAGTCTGCGACTTCACTTGTGACAAACGTTCTATTTTCGTGAGTCATCTGAAATGCGAGAAGCACTCGCACAGAAACATCCCAACTGCGATCAAGTCAAAGGAGAAACCGAGCCAAATATATTTCTGCAAAATCTGCAATTTCGAGAGCAAGAAGCGAACCAATTTGATGTCGCACGTCAAGCGGATGCACCGTCAAGAATTGAAGCTCCAGGTGAACGTGGACAACGAGGTGGAGTGCGAAGATCCGGAGGTCGATCCGATGCGAAACTCAAAAACGCAAAAGAAGCTCATTGCGGATTGTCTAAAATGCGACATGTGTGATTTCGAATGCACCAACAAGAGCACGCTTTATTCTCACAAACGTCGTCACCGAACTATTGACACCGGCGACGTTTATCAGTGCGACGAGTGCAACTACAAAACGGCGAAGAAGCAGTCTCTCTACTCGCACATTCACAGAAAGCACAAGCCTTTCAAGTCTTCAGGGTCGAAGGGCGAGCCCGAATATTTTTCCTgcagtcagtgcgactataagaacaaaaacaagtacgagctcaaggtccacgtcgcgagaaagcacacggacgacttcaagttctcctgcgacatctgcggcaaaaaattcaaggtcaaaggcgatctcacgaatcacataagattcagtcatcgcgagcagccggttatctgcgacgtgtgcggaaaaacttgtctcaacagtaattccctctacgttcaccagaaattcgctcattacaaggccaagtacgagtgtcaggtgtgcaaacgacgcatggtcagccaggagaacctcgacgagcacatgctgcggcagcacgagaaacgcgagaacgtcgtgtgcgaggaatgcggcaagaccttctcacgaaacagccgtctgaaaattcacatgcgcatccacaccggtgacaaaccctacgactgcacgatttgcaataaatcattcgcccggcgaacggccctcaagcaacacctgctaattcacacgggaatgcgaccctacgtttgcgacatctgcggcaaggcctttacgcaaaagcccggactgataagccatcgaaaatctcatcccggtcctcttccgccgcttcCCCGAGTGCTCATCGATCACATTCTCAACGACGTACTCAGACCGCCCTTATGA
Protein Sequence: MPKQETLTTFATERKATDEEKLNRAAHDIPSRLRPMSAKLKISTRPRKKRNPPRYHQHSKLEDTEEILKNPERKESLAALEFRINDKNLEPEEEDRDCDALYKKLNDGKYTCDICQTSFEQKSKILRHITSKHSFHRPFKCFLCTKAFKSWRKFSDLPSKCDDYEQQHYGKSVVPVGTWQRMDSNGEVDNTIDPLLQSEFKIEVVEEMSTSKKERLCGKPVEWHNCDKCGLKFPLETMLNRHKVAHNYSSGIKKMKKSVALSSKAEKSNKSKSDLEVSSPDLKYNCTVCDFTCDKRSIFVSHLKCEKHSHRNIPTAIKSKEKPSQIYFCKICNFESKKRTNLMSHVKRMHRQELKLQVNVDNEVECEDPEVDPMRNSKTQKKLIADCLKCDMCDFECTNKSTLYSHKRRHRTIDTGDVYQCDECNYKTAKKQSLYSHIHRKHKPFKSSGSKGEPEYFSCSQCDYKNKNKYELKVHVARKHTDDFKFSCDICGKKFKVKGDLTNHIRFSHREQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECQVCKRRMVSQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKIHMRIHTGDKPYDCTICNKSFARRTALKQHLLIHTGMRPYVCDICGKAFTQKPGLISHRKSHPGPLPPLPRVLIDHILNDVLRPPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -