Basic Information

Insect: Clistopyga incitator
Gene Symbol: -
Assembly: GCA_947507545.1
Location: OX382187.1:3772885-3776143[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.8e-06 0.00062 20.4 0.3 2 23 192 213 191 213 0.94

2 18 3.6e-06 0.00038 21.1 1.1 1 23 219 241 219 241 0.95

3 18 0.51 54 4.9 0.6 1 23 246 269 246 269 0.94

4 18 4e-05 0.0043 17.8 2.2 1 20 275 294 275 297 0.95

5 18 0.012 1.3 10.0 0.2 1 23 303 326 303 326 0.95

6 18 0.00022 0.024 15.4 0.4 1 23 337 359 337 359 0.95

7 18 6.5e-06 0.00069 20.3 2.1 1 23 363 385 363 385 0.95

8 18 0.00011 0.012 16.4 1.1 1 23 391 413 391 413 0.98

9 18 4.9e-06 0.00052 20.7 1.6 1 23 419 441 419 441 0.98

10 18 4.1e-06 0.00044 20.9 0.4 1 23 699 721 699 721 0.97

11 18 5.6e-07 6e-05 23.6 2.3 1 23 727 749 727 749 0.97

12 18 0.088 9.4 7.3 1.3 1 23 754 777 754 777 0.96

13 18 0.00025 0.026 15.3 5.2 1 23 783 805 783 805 0.98

14 18 4.4e-06 0.00046 20.8 2.3 1 23 811 834 811 834 0.97

15 18 0.014 1.5 9.7 1.7 1 23 845 867 845 867 0.91

16 18 6.8e-07 7.3e-05 23.3 0.9 1 23 871 893 871 893 0.96

17 18 3.6e-05 0.0038 17.9 0.7 1 23 899 921 899 921 0.98

18 18 1.9e-05 0.002 18.8 1.5 1 23 927 949 927 949 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.8e-06	0.00062	20.4	0.3	2	23	192	213	191	213	0.94
2	18	3.6e-06	0.00038	21.1	1.1	1	23	219	241	219	241	0.95
3	18	0.51	54	4.9	0.6	1	23	246	269	246	269	0.94
4	18	4e-05	0.0043	17.8	2.2	1	20	275	294	275	297	0.95
5	18	0.012	1.3	10.0	0.2	1	23	303	326	303	326	0.95
6	18	0.00022	0.024	15.4	0.4	1	23	337	359	337	359	0.95
7	18	6.5e-06	0.00069	20.3	2.1	1	23	363	385	363	385	0.95
8	18	0.00011	0.012	16.4	1.1	1	23	391	413	391	413	0.98
9	18	4.9e-06	0.00052	20.7	1.6	1	23	419	441	419	441	0.98
10	18	4.1e-06	0.00044	20.9	0.4	1	23	699	721	699	721	0.97
11	18	5.6e-07	6e-05	23.6	2.3	1	23	727	749	727	749	0.97
12	18	0.088	9.4	7.3	1.3	1	23	754	777	754	777	0.96
13	18	0.00025	0.026	15.3	5.2	1	23	783	805	783	805	0.98
14	18	4.4e-06	0.00046	20.8	2.3	1	23	811	834	811	834	0.97
15	18	0.014	1.5	9.7	1.7	1	23	845	867	845	867	0.91
16	18	6.8e-07	7.3e-05	23.3	0.9	1	23	871	893	871	893	0.96
17	18	3.6e-05	0.0038	17.9	0.7	1	23	899	921	899	921	0.98
18	18	1.9e-05	0.002	18.8	1.5	1	23	927	949	927	949	0.98

Sequence Information

Coding Sequence: ATGGACGATTTCTTTCGAATTCCAAAATCTCTGTGCCACTTCATGGTGAGACACCCGCTCATCGAACACACAGCGACGTCCAACGAATCGTTCAAGACTGATAACATCGACAGCGAGGACGTTAAAAAAATGACGAAAGAAGATAATTGTGAAAAATCGAAAAAATCGCAATTAATCACGGAGATTAATACGGAATCTCTTTCGGAAGAGGATGCGAAGATGTCCAAGGCGTCAAAGAAGACAATAACAAGAGACTGTAAGAAGCCAGTGAAAGTCAGACATAAAATTGAGTACCCAACGACCGAAAAATCCTATAAAAATCCAGTAGCTGCAAACGAGTGTCGTTCGCCCGCAGAAAACCTCGAAGATGTCCCACCGAAGAGGAGAAAGAAGCGTGTCAAGAATGAAGAAAGTTTAGCTAACAATATTCCTTCTCCAGTCGACATACCCGAAGAAAACACAAAGGAACCTTTGAAGAAGGAAAATCTCGACGACCTGGACGATGTTCCTTTGGATCTTCGACAACGGCATCCGGAAGTTGAGAAACCAGCGTCAAAAAAGCAGGGACCAGTGATGTGCGAATCGTGCGGCCAGAGTTTTCCTAGAAAGAGCCAATTGAAGGTTCACATGGTGAATCACAGTACCGTTAAATCGTACAAGTGTGAGATATGCAATATGACGTTCAAAAGAAAATCCGCGCTCAACACCCACTCGGAGCTTCATCGTGGATTAAAGTACAACTGCGACGAGTGCAACTTCGTCGGCTCGACGAAAGTATCCGTGAGATTTCACGTGCGGCGAATGCACCAGAAGGACTTTAGAtacaagtgcgacgagtgcggaaagagtttcatgtcgaacagcgagctcatcgatcacaagacttgccatcttggcacgaaaacttttatctgtgaattctgtggcaaagcgtacttgaagaaatcggccctcggagctcacaagcgactggtacatggaattgttcagaggatactgaggaaggattaccagtgcaagatatgcgacaaacgcttcgcctccgagtacattttgcaaaatcacactggcatacattcgagaaaatttttgtgcactcactgcggcaaagagttcgcatccaacagcagcctccagttgcacaatcgtatgcacaccggcgaacgtccctttcagtgcagacactgcgcaaagtccttcattcgttcgaacgctcttgtcgttcacgaactcacgcacagcggcaaaaggccctacgtctgcgatctctgcggcaaaagctttactcaaagaacgactatgatgattcacagaaaaaaacaccccggAAATCATCCTCCACCGCCGCCGATGCTCCTCAGCAAGCTCGACGACACGATCGACACAAATTCGTACATTCCGCCAGACCCGCTAGGGCCCGATTTTCTGACGGTAAAGATTATGGACGATTTCTTTCGAATTCCAAAGTCTCTGTGCTACTTCATGGTCAAACAACCGACACCCGGAGGGAAGGAAAATACCGAGCAAATTGCAAGAGTCAATCCGTCGACCACGAGTGAAACGTCGGAAGCAAGACGACAGGTGAAGTCCGAAGGTTCTTCGAACGAGGAAGTGCCTGTGAAAGAACAGGTCACGACGAAGAAATCATCGAAGAAGAAGAAGGACGAAAAAAAGTCGAGGCCAGTTAAAAACAAGGTTCCCCCGTCAAAAATAGATGAAATGGAGACAGAAGCTTCTTCGGAATGCTCTTCGCGAAAGGAACCAGCAGAAAATGAGCCACCGAAGAAAAAAATTCGAAAGGACAGAAAGGAAGAAAAGATTACGAGCGAGATTTCTGTGCTCCAAGATACAAATCCGAATAAACCTGCGACGAGGAGCCTGGAAATTCCATCGCACGAAGAAGTAACAGTGGAAAAACCACCAAAGAAGAGAAAGAAGCAAGAAAATGTAGCGAAGAAGGCGAAAATAAAGAAGCCGAAGAAAACTACTAAATTAACGAAAAAACGTCTTTCCGACGAGTTGCTCGATTCGAAATCGGACGGGCAAGAAAAAAATGTTCAGAAAGTCAAAAAAGCCAATGAAAAACCATTGTcctacgagtgcgaaacgtgcgcccgaagttttccgcgaaaaagtcagctgagagttcacatggtcaatcacagcaacgtgagatcccacaaatgcgaagtttgtcaaaaggcgttcaagagaaaatccgagcttacgagtcacatggagcttcacagcggaataaaatacacttgcgacgagtgtaatttcgttacgagcagcaaaatatccgtgagatttcacctacgaagaacccaccagaaggacttccgttacaagtgcgacgagtgcgggaaacatttTATGTCCAATTGCCAATTGAAGGACCACAAGTCGATTCATCTCGGAGTTAAGAGTTTCATATGCGAAATTTGCGGCAGATCTTATTACCAAAAGTCACATTTATCTTCGCACAAGCGATCGGTTCATGGGATCGTTCAGcgggccatgaagaaggaccacgagtgcaaaatctgcaaaaaacacttcgcttccgagtacattcttcaaaatcacgctggcatacatacgagaaaatttttgtgcacctattgcggcaaagagttcgcctcgaacagcagcctccagttacacactcgcatgcacaccggagagcgtccttatcagtgcagattttgcccgaagtctttcgtcagaacgaatgccctcactgtccacgaacttacgcacagcggcatgagaccttacgtttgtgatctgtgcggcaaaagcttcactcaacgcaccacgatgatgggccaccggaagaaacatCCGGGAAAACATCCTCCACCGCCACCGACTATGCTCAGTAAACTTAAGCCAACGGCCGATGCGAATTTCTAA
Protein Sequence: MDDFFRIPKSLCHFMVRHPLIEHTATSNESFKTDNIDSEDVKKMTKEDNCEKSKKSQLITEINTESLSEEDAKMSKASKKTITRDCKKPVKVRHKIEYPTTEKSYKNPVAANECRSPAENLEDVPPKRRKKRVKNEESLANNIPSPVDIPEENTKEPLKKENLDDLDDVPLDLRQRHPEVEKPASKKQGPVMCESCGQSFPRKSQLKVHMVNHSTVKSYKCEICNMTFKRKSALNTHSELHRGLKYNCDECNFVGSTKVSVRFHVRRMHQKDFRYKCDECGKSFMSNSELIDHKTCHLGTKTFICEFCGKAYLKKSALGAHKRLVHGIVQRILRKDYQCKICDKRFASEYILQNHTGIHSRKFLCTHCGKEFASNSSLQLHNRMHTGERPFQCRHCAKSFIRSNALVVHELTHSGKRPYVCDLCGKSFTQRTTMMIHRKKHPGNHPPPPPMLLSKLDDTIDTNSYIPPDPLGPDFLTVKIMDDFFRIPKSLCYFMVKQPTPGGKENTEQIARVNPSTTSETSEARRQVKSEGSSNEEVPVKEQVTTKKSSKKKKDEKKSRPVKNKVPPSKIDEMETEASSECSSRKEPAENEPPKKKIRKDRKEEKITSEISVLQDTNPNKPATRSLEIPSHEEVTVEKPPKKRKKQENVAKKAKIKKPKKTTKLTKKRLSDELLDSKSDGQEKNVQKVKKANEKPLSYECETCARSFPRKSQLRVHMVNHSNVRSHKCEVCQKAFKRKSELTSHMELHSGIKYTCDECNFVTSSKISVRFHLRRTHQKDFRYKCDECGKHFMSNCQLKDHKSIHLGVKSFICEICGRSYYQKSHLSSHKRSVHGIVQRAMKKDHECKICKKHFASEYILQNHAGIHTRKFLCTYCGKEFASNSSLQLHTRMHTGERPYQCRFCPKSFVRTNALTVHELTHSGMRPYVCDLCGKSFTQRTTMMGHRKKHPGKHPPPPPTMLSKLKPTADANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -