Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829532.1:3258823-3276743[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.4 4.4e+02 2.4 1.5 2 13 241 252 240 254 0.87

2 14 0.2 14 7.1 0.7 1 19 263 281 263 283 0.96

3 14 9.5 6.6e+02 1.8 2.9 1 23 309 332 309 332 0.92

4 14 0.045 3.1 9.1 2.1 1 23 361 383 361 383 0.96

5 14 4.2 2.9e+02 3.0 3.1 1 23 658 679 658 679 0.92

6 14 2.9 2e+02 3.4 0.6 1 14 696 709 696 718 0.80

7 14 0.06 4.2 8.7 0.1 2 23 724 745 723 745 0.96

8 14 0.31 21 6.5 3.7 2 23 844 865 843 865 0.93

9 14 4 2.7e+02 3.0 2.1 2 23 882 903 881 903 0.90

10 14 8e-07 5.5e-05 24.1 2.7 1 23 909 931 909 931 0.98

11 14 6.7e-05 0.0046 18.0 1.4 1 23 936 958 936 958 0.99

12 14 0.0007 0.049 14.8 5.1 1 23 964 986 964 987 0.96

13 14 1.5 1.1e+02 4.3 0.1 1 20 994 1013 994 1013 0.90

14 14 0.0016 0.11 13.7 0.6 3 23 1026 1047 1025 1047 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.4	4.4e+02	2.4	1.5	2	13	241	252	240	254	0.87
2	14	0.2	14	7.1	0.7	1	19	263	281	263	283	0.96
3	14	9.5	6.6e+02	1.8	2.9	1	23	309	332	309	332	0.92
4	14	0.045	3.1	9.1	2.1	1	23	361	383	361	383	0.96
5	14	4.2	2.9e+02	3.0	3.1	1	23	658	679	658	679	0.92
6	14	2.9	2e+02	3.4	0.6	1	14	696	709	696	718	0.80
7	14	0.06	4.2	8.7	0.1	2	23	724	745	723	745	0.96
8	14	0.31	21	6.5	3.7	2	23	844	865	843	865	0.93
9	14	4	2.7e+02	3.0	2.1	2	23	882	903	881	903	0.90
10	14	8e-07	5.5e-05	24.1	2.7	1	23	909	931	909	931	0.98
11	14	6.7e-05	0.0046	18.0	1.4	1	23	936	958	936	958	0.99
12	14	0.0007	0.049	14.8	5.1	1	23	964	986	964	987	0.96
13	14	1.5	1.1e+02	4.3	0.1	1	20	994	1013	994	1013	0.90
14	14	0.0016	0.11	13.7	0.6	3	23	1026	1047	1025	1047	0.95

Sequence Information

Coding Sequence: ATGTCTGATACCGGCAGAAAAAGGAGTAGAAAGACAAAATTAGTGCCGCGGGATTTTTCGGAGTTTGTCGACGATGATTGCTTTTTGCAGgaACCTCCTTTCAAAATCCCCTTTCTCAACAATCTCAAAAAGGAAGAAGATGGAGAATCATCAAGCGGTTCTGGACTGGAGTTCTCGGTCAAGGTGGAAGTCGAAGACATACACTCGCTCCCTGAAGAAGACCCTTCGAGCTACATGCAGTATCTCTTTAGTCTGTCCCAGGAATCTAGTGATCACATCGACGAAGATGCATGGGACAAAAAAATCGAAGACCTGAATAAATGTTTTATCATGGACACAAATAAGATGGTCAAAATATTCCATGCGTTGCACAGGAGGTACCCACAAGAGAAAGAGGCAGTCCTGCACTCAAGGAATGCCTGGGGCAAAGTTTTCCACGAAAAACCCATTGAGGAGCTGCCAAGACACCCGCAAGACTTAGAGTTGCAGAATATCCTGTCAAAGTGGAAAACCTGGTGCGTTGCCTCTCGATCTAAAGACACCCCTTTCAGCTACAAATGCTACATATGTGAGGATGCCTGGTGGTGTCTAACGGATTTTAGAAACCATATACGGTCACATGAGGACTGTAGCATATTTCTTGAGGAGGTGCAACAAGAGTGTAACATCGTCGCTCACGAGGGACCAGCACCGAAACCAAAAGACATTAAAATAGATGGTAAATGCTTCAAGTGCGCTAAGACGTTCAAACAGCACCAAGAATGTAAGAAATTTTCTGATTACCACTACTATTGCCTTTACTGCAACGAGCAGTACCCTACTTGCCGGATGCTAAATATTCACGAAGGTGTCTGTGATAAGAATCCCATAAGAACAGCAGCCATAACCGAAGACATAATGACAGATCAGAATAGATTCACAGAATATGCATGTCAAATTTGTAACGTAAAATTCCTTAATAAGCCGGAGAAGTGCGAACACTTGAATGTGTGTCACAGAGTACGGTCAGACGAACCGATAATTACATATAGTAAGAACAAGCATATGCTTGAAGCACACTCAGCGCTGTGGGACAGGCCGTTCAAGTGCAGTATTTGTGATAAGTTTGTCAAGAGGCAATGCATGGCTGCGGAGCACTATGCTAGGCACAGCGAGAACTTTCATCTTATGTATAGGTGTCTGCCGTGTGCGAAAATAAAGCTGTTCCACACGGACGACGCGTTCAGGAACCACCGGAGCAGGTCGCACAGGAAGCAGGACAACCGGAGGCCCGTCTGGGACCGGATCATTGTGCCCAAAGTGATCCTAGAGCAGTGCGAGTTCAATACGCAGGCGCGACGCAGGCGGAGTAACACTTGTAAAAAGGTCAAAAATCCAGCGCCAACCAAAACGGTTACAAAAACATACGGACCTGCAAGGAGGAGAGGAACTAACAGCAGCTCTGAAAACCAAGAGAACGAAGAAGTGAACACACCAGCAGTCAAGGACAATGACTCCATTGTCAGCGAGAGCAGTCAAAACGAACCAGAGGATAGCAAAGATTTCCACAAAACTCTGGACCAGATAACGGAAACTTTGGATATCAAACCAGAAATTGTAGTGAAAGAGGAAAGACTATCCGACGATGAAGACTCGAAGGCAGATTTGACGAAGATAATAGAACAAGTAAAGAAGGAACAGGATCAAAAACCGGAGATCCCTGCAGCTGTGCTCGAGCAATCTAATAAGTTTAAGCAAATCATACAAGAAGTACAGGAAAGCAAACTGTGTAACGTGTTCCGGGCTTCCAAAAGTGTGGGGACAGTTCTAAAGCAAGAGATAAAGAATGAACCTGAAGAAGATGCCGATGATTTGATCATTTTAGACACCGGCAACAAGTTGATTAAGCAGGAAAGCGAGAATTCAGATCTGAGCCTCCTCAATCTAGAACCGGAGGTCATTCTAAAAGCCGGGTACAGGAAACGAAAGACCTACAAGTGCAGCAAATGCGATTACGAAGGCTATCACAGGGAATACAGGGAGCACATCAACAACCACTGCCGGACACCGTCCAAAATCAAATCCCTTACTCCTACCAACGACAATTTCACCTGCACGAAATGTGACAACAGTTATGCTACCCTGAAGATCTACGCGCAGCACTTCGTTGAACACAACTACAGGTTCATGACCTGCCCGCAGTGTGTTACCATGTTTGACAGCATCACGAAACTAGTGTCACACATAAACGCGCATGTCAAACATTCGTTTGTGAGGATGCAAGTTATCAACCGTACTGACAGCGAGGAGAGGACCAAAGTCTGTCAGTGCAAGACGTGTAAAGAGGTTATAGATGTGAGGAATACCTTCGCACACTGGGAGGGGCATTTGGAGATACAACCTGAGCCGGAGAAGAAGCCCAGTGTGGTGGTGCTGGGCAAGGTGAACGCTCGGGGGGAGAACGCTCTGCCGCCTGAAGTGCTGAAACGGATACTAGACCTACTCCAACATCAAGACAGAATAGACAAATCGCTCCCAAAGAAAGTAAAAACGTGTTTCGTGTGCCAGCGCAGTTTCGAACGACAGAACGACTGCAAGAGACATCTGGTGGAACACTTACTAGAAGACGCTTACGCTAACAATGTTGATCATTCCGAgtatttaaaatgtcaaatatgcAGCGATCAGCATAGAAAACCTGATGCATATAAGAAGCACATGAGGGACCACGCCTCCCTGCCTATATACCAATGTGGGCTGTGCAACAAGACCTTCAGTGATTCCAGTAATTTTACCAAGCATAAGAAAGTACATAATCTGAAGGCGTATACTTGTGATGTATGCAATAAGAAGTTTCAAGCCAAGTTTTCACTGGAGAAACACATACAGATGCACATGTCAACCGACCCGTACCGCTGCGACCGCTGCGAGCGCGTATTCTACGACCGAAGCTTCTTCCGACGCCACGTGAGGCAGCACCACGACAAACCCCAAGCCAGGTTCCGGTGCATGATCTGCAAGGAAGGCTTTGAGTCCCTCCGGCTCAAATGGGACCACATGTGGGACGTCCACAAGCAGAGAAAATCCAAAGCCGACTGTCCCATATGCAAGAAGAGTTACAGGAAGATATCTGACGTGCGGAAGCACACACAGTTGGAGCACGGGTTCAATATCTCGCTGGCGAATGTTTTTCAGCTGGTTGATAAGTATCATACGGAGTGTGAGAAGGTGGTTGAGAGTTTGAAGGTGCAGCCGGATGAGAgtagtgatgatgatgtgttgtTGATTGAGGAGGAGAGAGAGACGCTGGTTATATATGATGATTGA
Protein Sequence: MSDTGRKRSRKTKLVPRDFSEFVDDDCFLQEPPFKIPFLNNLKKEEDGESSSGSGLEFSVKVEVEDIHSLPEEDPSSYMQYLFSLSQESSDHIDEDAWDKKIEDLNKCFIMDTNKMVKIFHALHRRYPQEKEAVLHSRNAWGKVFHEKPIEELPRHPQDLELQNILSKWKTWCVASRSKDTPFSYKCYICEDAWWCLTDFRNHIRSHEDCSIFLEEVQQECNIVAHEGPAPKPKDIKIDGKCFKCAKTFKQHQECKKFSDYHYYCLYCNEQYPTCRMLNIHEGVCDKNPIRTAAITEDIMTDQNRFTEYACQICNVKFLNKPEKCEHLNVCHRVRSDEPIITYSKNKHMLEAHSALWDRPFKCSICDKFVKRQCMAAEHYARHSENFHLMYRCLPCAKIKLFHTDDAFRNHRSRSHRKQDNRRPVWDRIIVPKVILEQCEFNTQARRRRSNTCKKVKNPAPTKTVTKTYGPARRRGTNSSSENQENEEVNTPAVKDNDSIVSESSQNEPEDSKDFHKTLDQITETLDIKPEIVVKEERLSDDEDSKADLTKIIEQVKKEQDQKPEIPAAVLEQSNKFKQIIQEVQESKLCNVFRASKSVGTVLKQEIKNEPEEDADDLIILDTGNKLIKQESENSDLSLLNLEPEVILKAGYRKRKTYKCSKCDYEGYHREYREHINNHCRTPSKIKSLTPTNDNFTCTKCDNSYATLKIYAQHFVEHNYRFMTCPQCVTMFDSITKLVSHINAHVKHSFVRMQVINRTDSEERTKVCQCKTCKEVIDVRNTFAHWEGHLEIQPEPEKKPSVVVLGKVNARGENALPPEVLKRILDLLQHQDRIDKSLPKKVKTCFVCQRSFERQNDCKRHLVEHLLEDAYANNVDHSEYLKCQICSDQHRKPDAYKKHMRDHASLPIYQCGLCNKTFSDSSNFTKHKKVHNLKAYTCDVCNKKFQAKFSLEKHIQMHMSTDPYRCDRCERVFYDRSFFRRHVRQHHDKPQARFRCMICKEGFESLRLKWDHMWDVHKQRKSKADCPICKKSYRKISDVRKHTQLEHGFNISLANVFQLVDKYHTECEKVVESLKVQPDESSDDDVLLIEEERETLVIYDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -