Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829532.1:4392045-4419133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.017 1.2 10.5 0.2 2 23 375 396 374 396 0.96

2 14 0.028 1.9 9.8 0.3 2 23 404 425 403 425 0.96

3 14 0.0027 0.18 13.0 2.2 2 23 506 527 505 527 0.96

4 14 0.13 9.1 7.7 1.6 1 23 530 551 530 551 0.95

5 14 0.068 4.7 8.6 0.3 2 21 558 577 557 578 0.93

6 14 0.2 14 7.1 0.7 3 21 588 606 586 607 0.92

7 14 0.00076 0.053 14.7 0.1 1 23 619 642 619 642 0.95

8 14 0.011 0.77 11.1 1.0 1 23 648 671 648 671 0.95

9 14 4.7e-05 0.0033 18.5 1.1 1 23 680 702 680 702 0.98

10 14 1.1 79 4.7 2.1 5 23 711 730 708 730 0.94

11 14 1.4 1e+02 4.4 0.1 1 23 957 980 957 980 0.96

12 14 0.043 3 9.2 4.9 1 23 1063 1085 1063 1085 0.97

13 14 0.00084 0.058 14.6 0.8 1 23 1088 1111 1088 1111 0.95

14 14 8.2 5.7e+02 2.0 0.5 3 11 1121 1129 1120 1131 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.017	1.2	10.5	0.2	2	23	375	396	374	396	0.96
2	14	0.028	1.9	9.8	0.3	2	23	404	425	403	425	0.96
3	14	0.0027	0.18	13.0	2.2	2	23	506	527	505	527	0.96
4	14	0.13	9.1	7.7	1.6	1	23	530	551	530	551	0.95
5	14	0.068	4.7	8.6	0.3	2	21	558	577	557	578	0.93
6	14	0.2	14	7.1	0.7	3	21	588	606	586	607	0.92
7	14	0.00076	0.053	14.7	0.1	1	23	619	642	619	642	0.95
8	14	0.011	0.77	11.1	1.0	1	23	648	671	648	671	0.95
9	14	4.7e-05	0.0033	18.5	1.1	1	23	680	702	680	702	0.98
10	14	1.1	79	4.7	2.1	5	23	711	730	708	730	0.94
11	14	1.4	1e+02	4.4	0.1	1	23	957	980	957	980	0.96
12	14	0.043	3	9.2	4.9	1	23	1063	1085	1063	1085	0.97
13	14	0.00084	0.058	14.6	0.8	1	23	1088	1111	1088	1111	0.95
14	14	8.2	5.7e+02	2.0	0.5	3	11	1121	1129	1120	1131	0.89

Sequence Information

Coding Sequence: ATGCAAGCAATACGGCGAGCGATTTGCGCGGGGTGCTTAAGTCAAGATAGGAAGCTGTCGGCGATACGAGACTTGAAGAAATATGCTTTCTTCTGCTACGCTTTGACATTTGACGAGAAGGACTGGGTGTGTTGGGAATGCAGGAAGATGGTGATAAAGTTGGCAGTGTTTCGGAGACAAGTGGCCAAGGCCCAGGGCTCGCTCGCAAACTTGATGAGTGGAAGACCATgccaaataaaatgcatttccAAGCTTACATCAGTCACAATTACTGAGAACCCTCGAGAGGATGAGGCGTTTGTAGAGGTTGAAGCACTAGACCCCCTGTACTACCAACTGGTGAAAGAGGCAGTTCTGAgtgacaatgatgatgatgatgatgaccacaATTCTGTTGACAATTACAAAGCTATGGGTGATGACGACACATTGGATGAGGAAGCAATAGCTGATGACGTAGCAAGGGATGATGAAGCAATAGATGATGACGTAGCAAGGGACGATGAAGCAATAGGTGATGACGTAGCAAGGGATGATGTAGCAATAGGTGATGACGTAGCAAGGGACGATGAAGCAATAGGCGATGACGTAGCAAGGGATGATGTAGCAATAGGTGATGACGGAGCTATGGCTGATGACGGAGCTATGGGTGATGACAATGCTACAGTTGAAGAGTTGGTGTATGAAGATGTGGATAATAACAGACCTACTGTTCAAATAACATTCATAGATGAAACTAATCAGACAGCTGCTAATATTGCTACAAAGCAACCGCAAGTTCTTTTTAAAGGCAGTAATGGTAATAATAAGAACACTCTTAGTAATGTTACTTCAGTTGGGAACAGTAGTTCTAGTAATATTGCTACGGTGTCTACCGTTCATTTGAGTTTTGATGAAgacgaaaTCCCCCTGCCTCAACCCAAACCGAAAATCCTGAAAAACGCCCGCAGTATCATAAAAGTCGTACCTGGCAACACCGGGGACAAAGCGACTCGAACGGAAGACACTTTCGTGGAAATAGACAATCCGTTCACAGTAGAGATGATGTCTCAGGACGAGATGATATTGTGGAGGCTGAGGAAGAGGAATATGGAGTTCTTCACCAGCTGCTCCCCGCTGCTGAGGTGCGAGGAGTGCATGGAGCCCTTTGACTCGCAGAGGATGTATACCGCTCACATGAAAGGGCATTCTAaaGATTTCGGTGACAAACCATGCGAAATTTGTGAGCTAATATTCCACGATGAGGAAGAGTTGAAAATACACAAAGAGCGGCACTACAACGCTCGCGGGCGCTACGGTATACGGCAGGTGAGGGGGTCCAGGATGGGAGGCGATCCGGAGATCCGCCCACAACCGCCTTCCCGGATGGTGAAGGTTCTCAGGCTCACGACCGAAAAGAACCCGCCGCGAATACCTGAACTCCTGAAATGCAAGCACTGCGAGTTCCAATGGGACAGCTCTAACGGCATGCGGGGCCACTGCCGCGCGTCCCACGGGATAGAGGTCGCCGCGTGGATATGCGACCACTGCAACCGCGAATACTCGGAGCTGTACAAGCTGCAGCGGCACCGGAGCCGTCACCAGGCGCACCAGTGCCCCGAGTGCGGCATCGCGCTGCGCAGCCACGTCAAGAAGCACATGCTGCGGGTGCACAAGGAATTACCGATGCTGACCTGTGATCGGTGCGGGCTTGAGTGCAAGGGCAATAGCGGGTTGCAAGCGCACGTGAAGAACTGTAGAACGGTGGCGGATCAGACGTTCTGCGTAGAGTGCAAAATTGAATacaagaacaaatattcgtaccGCGCGCATTTCAAGAACACCATGAAACACGCCTCGGACCAGCGGCCACGGTTTCAGTGCACGGAGTGTGGCAAAGGCTTCCTGGACTCGGCGTCGCTGATGAATCACGTCGACTCCGCCCACGAGAGGCTGAGGAAGTACCTGTGCGATATCTGCGGCAAgGGTTTCTTCACGATGATATCCCGCAAAAAGCACGAGCGACGCATGCACGGCAGCCGGCCCGTGCGCAAGGACTACGTCTGCGCCTATTGCGCGAAAACGTTTGAGagaaAGCGTGAATTGGAGCAACACACGAACAAGCACACGGGCAACCGCCCGTACAAGTGCAAATGCGGGGCAGCGTTCGGCTTCGAGTGCGGCCTGAAGCACCACATACGGGTGAAACACTCCTTGCCGACAACCCGCGAGGAGATCCAGATCGCCACAGTTTCGTTTTGCCACGTTTGTCTCAGCACAGACAGGGCGCTCTCAACAGCGAACGATTATGTggatattttttacaaattctttGAGAATCAGGACTTGATGCTTCCCAACATGCTTTTATGCTGGGAGTGTAAGGCACTGTTGAAAAAATTCAGAAAGTTTATTAGAAAAGCAAATGATGCCCAGAAGATGTTGCAGTTCTGGTATATGAGTAAACAGGATCCTTTCCCACACTCTTTATCTACACTATGTACATCCGAAAGAAATAATGAActcaaaataaataagcaaGAAGAACTAAAACCAGTCAAGATAGAACCTGATTTTGACAATCTTGACACTTTTGACAACTTTGACTCTGACACTGAGATCAAATATGAGCCACAGACAGACGCAACCAATGTCGATTTAGAATCTAAGACTGACATGGAACATTTGAAGAGTGATGATCAAAATTATAGAAAATCAAAGGAATTCAACGATAAAAgaaatagaaaaagaaaagCTAAATACAGATTTGTGAacacaaagttaaaaaaacacaGAAACTTGTTGATAAGAAAGATACCTATAGATATTAGTGAGGCGGTGCAAAGTTTGGAATTGGAGAGGAGGGATGCTTCATTTGTGAAGGCGGAGCATAAATGTGTGGGCTGCGTGGAGATTTATGAAGATGCGGAGAAGGTGGCTAATCACGTTAACAAGTATCATGATGAGTCACTAGGCTGTGCCTGCTACATCTGCCGCGGCCGCTGCCCGCCGGGAGCCCTGCAGGCGCACGTGGCGCGGCACGCGGCGCGGCGCGAGTGCCGCGCGTGCGGGTTCGGGTGCTGCGCGCCCGGCCTCATGCGGAGGCACGTGGCCGACCACCATCGGATGGTGCAGTGCCTCGCTTGCGAGCTGTTCTTCAAAAACGTCCGCCGTTTCTACGACCACTACAAGGCGCTCCACGGCGCGTTCGTGTGCGATTGCTGCGGCAAGCGCTGCCGGACGCGCGCCATGATCGAGAAACATCTGCGACGGCACTTTGGCTACGAGTGCCCATTCTGCAAGAAGACGCTCAAAAACTCGTCCACGTATAGCAACCACGTCGCCGTCCAGCACACGGACTCGTTCGCGGAGGCCGCTTACTGCGTGCAGTGCGACAAGCGGTTCAAGGCGAGTATCCCACACTTTAACCCTACGAcgcatgggtcaatcaacttttcgttgccactcgttgccatggagacgtcccccgGGTAa
Protein Sequence: MQAIRRAICAGCLSQDRKLSAIRDLKKYAFFCYALTFDEKDWVCWECRKMVIKLAVFRRQVAKAQGSLANLMSGRPCQIKCISKLTSVTITENPREDEAFVEVEALDPLYYQLVKEAVLSDNDDDDDDHNSVDNYKAMGDDDTLDEEAIADDVARDDEAIDDDVARDDEAIGDDVARDDVAIGDDVARDDEAIGDDVARDDVAIGDDGAMADDGAMGDDNATVEELVYEDVDNNRPTVQITFIDETNQTAANIATKQPQVLFKGSNGNNKNTLSNVTSVGNSSSSNIATVSTVHLSFDEDEIPLPQPKPKILKNARSIIKVVPGNTGDKATRTEDTFVEIDNPFTVEMMSQDEMILWRLRKRNMEFFTSCSPLLRCEECMEPFDSQRMYTAHMKGHSKDFGDKPCEICELIFHDEEELKIHKERHYNARGRYGIRQVRGSRMGGDPEIRPQPPSRMVKVLRLTTEKNPPRIPELLKCKHCEFQWDSSNGMRGHCRASHGIEVAAWICDHCNREYSELYKLQRHRSRHQAHQCPECGIALRSHVKKHMLRVHKELPMLTCDRCGLECKGNSGLQAHVKNCRTVADQTFCVECKIEYKNKYSYRAHFKNTMKHASDQRPRFQCTECGKGFLDSASLMNHVDSAHERLRKYLCDICGKGFFTMISRKKHERRMHGSRPVRKDYVCAYCAKTFERKRELEQHTNKHTGNRPYKCKCGAAFGFECGLKHHIRVKHSLPTTREEIQIATVSFCHVCLSTDRALSTANDYVDIFYKFFENQDLMLPNMLLCWECKALLKKFRKFIRKANDAQKMLQFWYMSKQDPFPHSLSTLCTSERNNELKINKQEELKPVKIEPDFDNLDTFDNFDSDTEIKYEPQTDATNVDLESKTDMEHLKSDDQNYRKSKEFNDKRNRKRKAKYRFVNTKLKKHRNLLIRKIPIDISEAVQSLELERRDASFVKAEHKCVGCVEIYEDAEKVANHVNKYHDESLGCACYICRGRCPPGALQAHVARHAARRECRACGFGCCAPGLMRRHVADHHRMVQCLACELFFKNVRRFYDHYKALHGAFVCDCCGKRCRTRAMIEKHLRRHFGYECPFCKKTLKNSSTYSNHVAVQHTDSFAEAAYCVQCDKRFKASIPHFNPTTHGSINFSLPLVAMETSPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -