Basic Information

Insect: Clepsis dumicolana
Gene Symbol: ZIPIC
Assembly: GCA_963691665.1
Location: OY829532.1:4343621-4357407[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.09 6.2 8.2 2.8 1 23 325 348 325 348 0.94

2 8 0.0018 0.12 13.6 2.1 1 23 362 384 362 384 0.97

3 8 0.046 3.2 9.1 2.7 1 23 458 481 458 481 0.97

4 8 0.11 7.6 7.9 0.4 1 23 484 507 484 507 0.96

5 8 0.0012 0.086 14.0 2.4 2 23 551 573 550 573 0.94

6 8 0.014 0.95 10.8 1.8 1 23 579 602 579 602 0.94

7 8 0.00015 0.011 16.9 1.3 3 23 613 633 612 633 0.99

8 8 0.00023 0.016 16.4 0.2 1 23 639 662 639 662 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.09	6.2	8.2	2.8	1	23	325	348	325	348	0.94
2	8	0.0018	0.12	13.6	2.1	1	23	362	384	362	384	0.97
3	8	0.046	3.2	9.1	2.7	1	23	458	481	458	481	0.97
4	8	0.11	7.6	7.9	0.4	1	23	484	507	484	507	0.96
5	8	0.0012	0.086	14.0	2.4	2	23	551	573	550	573	0.94
6	8	0.014	0.95	10.8	1.8	1	23	579	602	579	602	0.94
7	8	0.00015	0.011	16.9	1.3	3	23	613	633	612	633	0.99
8	8	0.00023	0.016	16.4	0.2	1	23	639	662	639	662	0.95

Sequence Information

Coding Sequence: ATGTACAGTGTGAAAAGGGAGTCTGGCGCCGAAATATGCCGCGGCTGCCTCAGCACGGACCGGCGCCTGTCGCCGCTGGCCAATTACGATTTGTTCTTCACTCTTTTGAACGACAAACAAAAGTTGGAGGCTTTAAATACTCCTGCTCCGTTACTGTGTTGGGAATGCAATGCGTCTCTGCGCAGGATGAAGCTGTTCCAGACACAGGCACAGCAAGCATACCGGTTGCTGGAACAGATGGTAGATGAATTGctCATCCAAGGATTATCCCAACTTTCGATCAGTCATAAACAAGACTATGATGTCATTATTGAAGATTGTCTCGATTGCATAGAAGAACCACTTATAAGTCCAATTAAAGATGAAGAAATTAAAGTACAAATAGAGGAATTAGATGTTAATTCTATTGAAAGTTATGATCATGATTTTGAAGATAGTGATAACTATGAAAGTAATGATAGATTGGAGTTAGAAGAACCGACAACAGTTACCTTTGCAGAAGAAATAATGAACACGCCACTAAAGAAATCTAAACCCAGTGATGCTGATGTTCTAGCAACGAAAGATTTACAAAATGAACTCGTACATAATAAAGCCGAAGCAAACACAGAATCAGATCTAGAAAAATTAGAAAATGCAGGAAAAGATGTTGAAAATCCAAAAGAGAGGATAGAAACCGGAAGTGgtgaaattgaacaaaataataatctaagTGATGTTGACAGTCAAAGTGACCCTGGTAACGATGATTCAGATTACGAAGAAAAATTGAGAAAACATAGTAAAATCACAAATACAAGCGTAATTAAGAAAAAAGGTGTAGTGACTAATGACTCCTGGTCGCGTAGTGTATGTTTAAGATTTAGTATAGTTGAAGAATTGGATGAATATTTTACTAAAGTTGATCTAAGTGCTAAGAAGATTAAAGATATTTTAGATAATGAACTTTCGTATGAAAGTGAAGAACTACCATACAACTGCAATTATTGTGGTCTCTGCTTCCAATTGACAAGAGTATTGATTCAGCATAAAAGAGAACGCCACAAGCAAATCGCAAAGTGCAAGAATCCAGTTTACTTGATGTACCGATGCAACATTTGTGATAAAACTGTCAGGAAAGAGCACACGGAAGCCCACATGAAGTACTTGCACCGCGTCCGGCACCACTGCAAAGAGTGTGACCAACCGTTTTGGGCGTGTCCAGTCAGTGCTCCGATCGCGAGTCGGAGCTGCGGTCTCTCCAACCCGCGAAGCTTGCGGGACAATCTGGGGTTAATCGTCGGGAGGGCCTCTCTGGTCTGCCTGCAGGATTCCAGGGATAAGGAAGAAGGTAAAAATCACTATATTGCAGCCCACAAGGATCCGCGAAGGTTTAAGTGTGACCGGTGTGGCAGGGACCACAAATCTCAGAAAGCTCTGGAGAGTCACACGAGGGAACGCCACACAAGATTCACGTGTGACGTCTGCAACGTAATCATAACCGGCGTTAATAACCTGAAATCACACAAGCGTTACCGACACGAGTCCGACGACAGCGCCCCCGAGCTGCGCTACTGCGTGACGTGCGACAAGCAGTTCTTGTCGGTACTCGCGTATGAGGCGCACCTCAGACACAGTACGGCACACAGGGGAACACCGCCCGAGAGAGTCAGTTGCACGGAGTGCGGCAAAACGCTCCGCCACAAATTAAACTTGAGGTATCATTACGATCGATATCACGCCGGCAAGACGAAGTTCCACTGCTCGCCCTGCAACAAGtaTTTCGCCCGCCAAAGTGGGCTAAGGGGCCACAACCGGTCAGTGCATCTGAAGGTGAGAGCCCCCAAAGACAAACTGTGCAGCATCTGCGGCCGCGGGTTCTCTacatTTCGCAACCTGAAGTTTCACATACGCACGCACACGGGCGAGCGTCCCCACGCGTGCCCGCACTGCCCGGCCGCCTTCGCGCAGCCCTGGCCTCTACGGAAGCACTTGGAAACTCAACATGGCGAGGCTCCCAAGACACAAGCGGGAGGCCCCGCGACACTAGCGTTGGGACCTTGA
Protein Sequence: MYSVKRESGAEICRGCLSTDRRLSPLANYDLFFTLLNDKQKLEALNTPAPLLCWECNASLRRMKLFQTQAQQAYRLLEQMVDELLIQGLSQLSISHKQDYDVIIEDCLDCIEEPLISPIKDEEIKVQIEELDVNSIESYDHDFEDSDNYESNDRLELEEPTTVTFAEEIMNTPLKKSKPSDADVLATKDLQNELVHNKAEANTESDLEKLENAGKDVENPKERIETGSGEIEQNNNLSDVDSQSDPGNDDSDYEEKLRKHSKITNTSVIKKKGVVTNDSWSRSVCLRFSIVEELDEYFTKVDLSAKKIKDILDNELSYESEELPYNCNYCGLCFQLTRVLIQHKRERHKQIAKCKNPVYLMYRCNICDKTVRKEHTEAHMKYLHRVRHHCKECDQPFWACPVSAPIASRSCGLSNPRSLRDNLGLIVGRASLVCLQDSRDKEEGKNHYIAAHKDPRRFKCDRCGRDHKSQKALESHTRERHTRFTCDVCNVIITGVNNLKSHKRYRHESDDSAPELRYCVTCDKQFLSVLAYEAHLRHSTAHRGTPPERVSCTECGKTLRHKLNLRYHYDRYHAGKTKFHCSPCNKYFARQSGLRGHNRSVHLKVRAPKDKLCSICGRGFSTFRNLKFHIRTHTGERPHACPHCPAAFAQPWPLRKHLETQHGEAPKTQAGGPATLALGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -