Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829506.1:23700899-23711530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0011 0.074 14.3 2.5 1 23 261 283 261 283 0.99

2 11 0.056 3.9 8.9 2.2 1 23 291 314 291 314 0.90

3 11 0.66 46 5.5 0.3 1 23 318 341 318 341 0.87

4 11 0.00027 0.018 16.2 1.9 1 23 416 438 416 438 0.99

5 11 0.0015 0.1 13.8 1.8 1 23 446 469 446 469 0.97

6 11 4.1 2.8e+02 3.0 5.4 1 23 473 495 473 495 0.98

7 11 6.9e-05 0.0048 18.0 2.5 1 23 500 523 500 523 0.98

8 11 1.1 80 4.7 1.7 3 21 529 547 528 550 0.80

9 11 3.9e-06 0.00027 21.9 1.3 1 23 670 692 670 692 0.98

10 11 0.00032 0.022 15.9 1.1 1 23 698 720 698 720 0.97

11 11 2.8e-05 0.0019 19.3 2.7 1 23 726 749 726 749 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0011	0.074	14.3	2.5	1	23	261	283	261	283	0.99
2	11	0.056	3.9	8.9	2.2	1	23	291	314	291	314	0.90
3	11	0.66	46	5.5	0.3	1	23	318	341	318	341	0.87
4	11	0.00027	0.018	16.2	1.9	1	23	416	438	416	438	0.99
5	11	0.0015	0.1	13.8	1.8	1	23	446	469	446	469	0.97
6	11	4.1	2.8e+02	3.0	5.4	1	23	473	495	473	495	0.98
7	11	6.9e-05	0.0048	18.0	2.5	1	23	500	523	500	523	0.98
8	11	1.1	80	4.7	1.7	3	21	529	547	528	550	0.80
9	11	3.9e-06	0.00027	21.9	1.3	1	23	670	692	670	692	0.98
10	11	0.00032	0.022	15.9	1.1	1	23	698	720	698	720	0.97
11	11	2.8e-05	0.0019	19.3	2.7	1	23	726	749	726	749	0.98

Sequence Information

Coding Sequence: ATGTTGGAGTTGAAGGCTTGTACGGCGTGTTTTAGCACAGATGCTAAACTGTATAACATGGACTCTGGCTCTTTACGCCATGAATACAACTTGGTGTCTGGACTCAAGACTGCTGATTGCTCCGGAATGccaaaatatttatgttttgaaTGCTCTGCGTACGTAAAACGCTTCATCAAGTTCAGGAAAAAATGCCAACGAGCGCATTTCGCTTTGCAAGAAATTTTACACAGGAATAAAGAGATTAATGTATCCAAACTTGAGGCTATAGACCGTGAATGCTTGGACATAATGCCGGTACTATCTTTCATAGACACAAACCACACAAAATATGAAGAAGTGCAGTTCCAGTGGACCAAGAGTAACCGCCTAGCTATTTATGATGGCGATCAAATACCCATAATCCATCACAGCACTTCTACTTCCCAAGTCATAGACATGCCTAAAGAACTAAAGCTAGAACTGGATGATGCAGTCAGTGAAAAAGAGGTGGCTGTATCAGCAGAGCAGCAAGATTTACAGATTTTAGAACAGTCAATTTCCATAGTAAAAGATAATGAAGAATGTGATTATTTTGATAATGATGACAATAATCAAACTGATCATTCTGCAGACAATGTGCCACCTGTGAAGGCTCCtcctaaagtaaaaaaaaaggctgttaGAAAATTAGAAACTGACGGGTCTAGTTTAGATGAAGAATATGCAAGTATGGTGGCAATATCGGACCGGGACGCACAGGCTGCAGTTGATGTGTATCGATTGTTCAGTCATGGGGCTTTTAGGTGTCAAGTGTGCAACAAGGGGTATCATACGGAGCAAAGGCTGACTGCACATTTGCGTATGCATGATCAGCATGTGAGTGGCAATTTCCTGTGCACTCTGTGCAACTACTACTATAAGACGGAGTACCTACTCAAGACGCACACCACGGAGAAGCATATGTATAAATATGAGTGTAAGAAGTGCAATGAAGTCAGTTTTGATCGTCTTTCAGCCAAACAGCACTACATCTGGGCTCACCTCCAACGAGGCAGGAAGAAGGACGCTAACTGGTATGAGTCGCGCCCCAAGTGGCTCAGCACTAAGGGCGGGAAGCGGGTAAAGGGCGTAGTGACCATCCGACCTGTCAGgAAAATCACAAAGCTCCCAGCAGACTTCCCGGTCTACTCCCCCGTGAAGCATGAGGAGCAGTACGACCTGATCCTGGACCGCAAGAAGTCCAGAAACTATATTGAGGCGGAGTACAAGTGCGAGTTCTGCTATAGAGGCTTCCGGGCTGCTGCCACTTACAATAAGCATATGAGGAAGCATGATCCTGAGTACTCGGGCGCGTTCCAGTGCGACATGTGCAAGCTGTACTTCAAGAGTCCCCGCAAGGTGTACAGACACATGAACATAACGCACCTCTTCAAGTACTCCTGCCAGTTATGCAAGTTCGTCTGCTTCAACAAGGGCCAAGCGCATATGCACTATCGTTGGCACAAAAACGTTACGTACCAGTGTCCTCATTGCGAGAAAGAGTTCAAGAAAGCGTCCACACGTCTCACGCACATCAGAATAAAGCATCCGTCCACAAATATCTGCAACTTGTGTGGCCACAGCTTCGTGAGCGAGAACGGACTGTACTGTCACAAGCAGCTGGCTCATAGTACAGAGGAGCGCGACATAATGGAGCAATCGGTGGCGAACCCCGCGGACGCGCTGTTCTGCGCGGACTGCAACATCCAGTTCCTGAACGAGGCTGCCTTCGCCACACACCTCGGCAGCTCCAACAAGCACGCTACTACTAACCTGTCTATAGTGAAGCCggtgcggcgcggcgcggcgggcggcgagcggcggcggcgcgggcggccgcGCTCCGGCGTGTACAGCTCGGAGGTGCTCAACACGGGCACCGTCACCGCCACCAGCTGCGACCTGTGCTCGGAGCACCTGTCCAACGACGTGCAAGCGCGGAAGCACTACGCCGAGCAACACCCCGGCGCGGAGTTCCTCAAGCGATACATGTGTGACGTCTGTGGGCACACCACTAAGCAATACGCGAACCTGATGGTGCACATGCGGACGCACACGCACGAGAAGCCGTACTCGTGCCCGCACTGCGAGCGCCGCTTCAGCATGCCGAGCAACCGTGACCGCCATCTAGTGGTGCACACTGGCGAAAAACGCTACCAATGCCAGCACTGCAACAGACGCTTCACACAGTCCACCGCCGTCAAACTGCACATACAAACCGTCCATCTGAAGATACCATATAAACCGTGGGAGAAGAAAAACAGGAAGCGACGCAAAGAGGACCCCATGCTTGGTCCAGTCGGCTCCGTCAACGTCGGTGCCGTGAGCGCGGCGATGTTGCCACAACATAAAATATTGCTCGAGACCCAAGGGGATTATTTGAATGCTTTTATTAGTTATAATGACGAGTGA
Protein Sequence: MLELKACTACFSTDAKLYNMDSGSLRHEYNLVSGLKTADCSGMPKYLCFECSAYVKRFIKFRKKCQRAHFALQEILHRNKEINVSKLEAIDRECLDIMPVLSFIDTNHTKYEEVQFQWTKSNRLAIYDGDQIPIIHHSTSTSQVIDMPKELKLELDDAVSEKEVAVSAEQQDLQILEQSISIVKDNEECDYFDNDDNNQTDHSADNVPPVKAPPKVKKKAVRKLETDGSSLDEEYASMVAISDRDAQAAVDVYRLFSHGAFRCQVCNKGYHTEQRLTAHLRMHDQHVSGNFLCTLCNYYYKTEYLLKTHTTEKHMYKYECKKCNEVSFDRLSAKQHYIWAHLQRGRKKDANWYESRPKWLSTKGGKRVKGVVTIRPVRKITKLPADFPVYSPVKHEEQYDLILDRKKSRNYIEAEYKCEFCYRGFRAAATYNKHMRKHDPEYSGAFQCDMCKLYFKSPRKVYRHMNITHLFKYSCQLCKFVCFNKGQAHMHYRWHKNVTYQCPHCEKEFKKASTRLTHIRIKHPSTNICNLCGHSFVSENGLYCHKQLAHSTEERDIMEQSVANPADALFCADCNIQFLNEAAFATHLGSSNKHATTNLSIVKPVRRGAAGGERRRRGRPRSGVYSSEVLNTGTVTATSCDLCSEHLSNDVQARKHYAEQHPGAEFLKRYMCDVCGHTTKQYANLMVHMRTHTHEKPYSCPHCERRFSMPSNRDRHLVVHTGEKRYQCQHCNRRFTQSTAVKLHIQTVHLKIPYKPWEKKNRKRRKEDPMLGPVGSVNVGAVSAAMLPQHKILLETQGDYLNAFISYNDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00654718;
90% Identity: iTF_00156622;
80% Identity: -