Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829530.1:2674460-2675542[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00065 0.045 14.9 0.8 1 23 41 64 41 64 0.94

2 9 2.1 1.4e+02 3.9 0.6 3 23 137 157 135 157 0.89

3 9 0.00066 0.046 14.9 0.4 1 23 161 183 161 183 0.97

4 9 0.022 1.5 10.1 2.9 1 20 188 207 188 211 0.90

5 9 0.0036 0.25 12.6 2.6 2 23 218 240 217 240 0.96

6 9 9.2e-07 6.4e-05 23.9 1.5 2 23 248 270 247 270 0.97

7 9 9.8e-05 0.0068 17.5 0.8 2 23 277 298 276 298 0.97

8 9 0.00017 0.012 16.8 0.4 1 23 304 326 304 326 0.99

9 9 0.00029 0.02 16.0 5.5 1 23 332 355 332 355 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00065	0.045	14.9	0.8	1	23	41	64	41	64	0.94
2	9	2.1	1.4e+02	3.9	0.6	3	23	137	157	135	157	0.89
3	9	0.00066	0.046	14.9	0.4	1	23	161	183	161	183	0.97
4	9	0.022	1.5	10.1	2.9	1	20	188	207	188	211	0.90
5	9	0.0036	0.25	12.6	2.6	2	23	218	240	217	240	0.96
6	9	9.2e-07	6.4e-05	23.9	1.5	2	23	248	270	247	270	0.97
7	9	9.8e-05	0.0068	17.5	0.8	2	23	277	298	276	298	0.97
8	9	0.00017	0.012	16.8	0.4	1	23	304	326	304	326	0.99
9	9	0.00029	0.02	16.0	5.5	1	23	332	355	332	355	0.98

Sequence Information

Coding Sequence: ATGGTACGTGTGGTGAAAAAAGATTGGGAGCCCAAGGAACTATTCAAACACCGTACCAATATACGTGTGATTCTGGAATATTCCAACGCTACGCCCATCCGCTGTCGGCGCGCGCGCGGATACCAGTGTTGCTTTTGTACGGAGCAATTCCCAAACCCCGCTGATCTCAAACAACACACGATTGAAGGCCATGATACCAAAACTAAACGTTTCTTTatggaaagaaaaatattttactcaTACCTTGTCAGACTGGATATTACAGGGCTGCGCTGCAACCTTTGTGACAGCAACATAGAATTACTGGAAGTTCTAATTAAACATCTAACCGACATCCACGGCAAGAAATTCTACGCAGATGTCAAAAGTCACATCCTACCTTTTCAGTTTAACGACGAAATATTACGATGCATCTACTGCTTCAACACATTCAACGCGTTCAAAGTTTTACAAGAACACATGAACATTCATTTcaggaattacatttgcaagACGTGCGATGGCGGATTCGTTACTCGAAGCATGCTGAGTAACCACTCTAAAATCCATCTAACAGGCACGTTTAAATGCAATCAATGCCCCAAAGTTTTTGACACGTTGGTTAAGAAAAGGTCACACGTAAAGTGTGTGCACAAACTCGTCAAGTTTAACAAGTGTGCTTACTGCCCGGAGAGATTCCGCGACCACAGGTCGAAAGTCAGACACATGAAAGAGTACCATGGCTACCAATTTGGAATCACGAAGTGCGAGATTTGCGATAGAACGTTCAACTCCTCGACTTCACTGAGGAATCATATTAAAAGAGACCACTTGCACACGAGGCCTAATAAATGTCCGAATTGCGAAATGTCTTTCTATAAAAAATCTCAGCTAGATGAACATATGGTGAAGCACAGTGGTATCAAAAATTTCAAATGTGCAGTGTGTAGCAAGTCGTACGGATTAAGAAAGACGTTAGTTGAGCACATGAGGATTCACGCCAACGACAGGAGATTCAAGTGTGAACACTGTGCCATGACGTTCGTGCAAAAATGTAGCTTGAAAGGGCACATGCGGTCCAAGCATAACGATTGTCTCGTCTAG
Protein Sequence: MVRVVKKDWEPKELFKHRTNIRVILEYSNATPIRCRRARGYQCCFCTEQFPNPADLKQHTIEGHDTKTKRFFMERKIFYSYLVRLDITGLRCNLCDSNIELLEVLIKHLTDIHGKKFYADVKSHILPFQFNDEILRCIYCFNTFNAFKVLQEHMNIHFRNYICKTCDGGFVTRSMLSNHSKIHLTGTFKCNQCPKVFDTLVKKRSHVKCVHKLVKFNKCAYCPERFRDHRSKVRHMKEYHGYQFGITKCEICDRTFNSSTSLRNHIKRDHLHTRPNKCPNCEMSFYKKSQLDEHMVKHSGIKNFKCAVCSKSYGLRKTLVEHMRIHANDRRFKCEHCAMTFVQKCSLKGHMRSKHNDCLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00462758;
90% Identity: -
80% Identity: -