Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829532.1:6939537-6955771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 9.6 7.6 2.9 1 23 266 289 266 289 0.98

2 10 0.00067 0.046 14.9 0.5 2 23 297 318 297 318 0.95

3 10 0.74 51 5.3 0.8 1 20 322 341 322 344 0.85

4 10 3.3e-05 0.0023 19.0 2.6 1 23 349 372 349 372 0.97

5 10 0.0025 0.17 13.1 0.1 2 23 381 403 381 403 0.94

6 10 3.4e-05 0.0024 19.0 0.7 1 23 468 491 468 491 0.95

7 10 4.8e-05 0.0033 18.5 0.1 3 23 520 540 519 540 0.98

8 10 7.3e-05 0.0051 17.9 0.3 1 23 546 568 546 568 0.96

9 10 0.042 2.9 9.2 1.8 2 23 575 596 574 596 0.95

10 10 5.4e-06 0.00037 21.5 0.4 1 23 602 625 602 625 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	9.6	7.6	2.9	1	23	266	289	266	289	0.98
2	10	0.00067	0.046	14.9	0.5	2	23	297	318	297	318	0.95
3	10	0.74	51	5.3	0.8	1	20	322	341	322	344	0.85
4	10	3.3e-05	0.0023	19.0	2.6	1	23	349	372	349	372	0.97
5	10	0.0025	0.17	13.1	0.1	2	23	381	403	381	403	0.94
6	10	3.4e-05	0.0024	19.0	0.7	1	23	468	491	468	491	0.95
7	10	4.8e-05	0.0033	18.5	0.1	3	23	520	540	519	540	0.98
8	10	7.3e-05	0.0051	17.9	0.3	1	23	546	568	546	568	0.96
9	10	0.042	2.9	9.2	1.8	2	23	575	596	574	596	0.95
10	10	5.4e-06	0.00037	21.5	0.4	1	23	602	625	602	625	0.96

Sequence Information

Coding Sequence: ATGGCCACAGTGAAGCGAGAGACAGACGAGCTGCTGGCTTGCAGAATATGCCTTGCGACCAACACCAAACTTTTTGGGCTACGTGAACACAATTTGAACGATACTTTCATCGATATTATGGGTCCTGCGCTGTCGGCATGGGACGGGCTCCCGCAGCACCTGTGCGCCTGGTGCCGCGCGGAGCTGCTGCGCGCGGCGGGACTCCGGGCGCGCTGCCACCGGGCAGAGGACCTGCTCACACAATCACTCGTGCACCAGCACTTTATAACTACAAACTACCTCGAAACCCTCGACAGAGTTGCGCACCAGCTCACTCTCTGTCTCACCATCAGCAGCACAGCCACCACAGACTCCACCCAAGAAGACACCAAGCAGGAAAAACAGGAGAAGATAGAAGCCGAAGATCCAGAACCAGAACTAGATGACTTCGATCTGTACCACCCAGAATTTGATGAACCCATCATAAACCTGAAAAACAAAATGATTTTAGAAAATATGAAGAATACCGAATTGAGAGTAGAGTTAGTTAAGACTGATCTAGAAATTAAGGAGCAGAAAAATGAGAATAGAGCGAAGAGAGTCAAGAAGGGTGTGAGGAAAAAGGAGAGGGACGAACGGAAGAAAGAGAAGGAGTGTAAAGGGAAGATGAAAGGGATCAAGAAGTTCTTTGCTAGTGAAGACGATTACACCAAATTTGAGAATACTTATAACATAGAGATAGTGAAGCTGTCCGAAGAGGAGCAGCTGAGCGAGATGCAGGCGCGCAAGGAGTCAAGCAACTACCTGCGCTCCGCCTACAAGTGCGAGCGCTGCTTCAAGGGGTTCCTGTCCGAGACCACCTACGAGAACCACCAGAAGAAGACCCATGAGCCGAGCAACGGCCGCAACGAGTGCGGGCTGTGCGGCGCGCGGTTCCGGCACCCCGCCGGGCTGCGGAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATCTGCCAGTTCGTCACCAGACACCGGAGTATGGCGGTAATGCACGCAGACTTTCACTCTGGGAAGACTTTCGTCTGCAAATATTGTGGACTTACTTTCAACAAGCAGACCACGTTCAACACGCACACGCGCGTGCAGCACCCGCTCGAGAACGCGCGCGCCGGCACCTGCTCCGCCTGCGGGGAGACCTTCACGGGCAAGCGCGGCCTGCAGCAGCACCGCGCCATCGCGCACAAGAAGctgtcGACGCCTGAGCTGAAGTGTCGCGTGTGTCTGGTGCAGTTTGACAACCTAGAGGCGAAACAGCGACACAAAGAGAACAACATCTGCGACCCCAAACTCAGggcgtgcgcggcgtgcggcgcgCGGTGCGCCGACGACGCGGCGCTGGACGCGCACGCGCGGGACTCCCACGGCAAGGAGCACTACAAGTGCGACCAGTGCGACACGACGTTCGCCAAGAAGTCGTCGCTGGCGGTGCACTTCGAGCGCGTGCACCTCAAGATCAAGCCGAAGAAGCCGGCCTTCTACAAGTACCACCAGTACGGCAAGGGGCGGCTCAAGATACGCAACGCGGAGATCTGCGAGATCTGCGGGAAGGGATACCCGGACACGACGTGGCTGCGCTACCACCAGCGCACGCACACGGGCGAGCGGCCCTACAAGTGCTCCCAGTGCACTAAGAGCTACATGACGCCCGCCGGACTGCAGCGTCACGTGGTGATCCATACGGGCGTGCGCCGCTGGCAGTGCTCGCAGTGCCCCAAGACCTTCCTGCACCAGTCCTCCATCTACACGCACAAACTGGTGCACACTGGCGAGAAGCCGTTCGTCTGCCAGATCTGCAGCAAGGCGTTCACGCAGTCGGGCTCCCTGCAGACGCACGTCAAGTACGTGCACATGAAGCTcaagccgccgccgcgccgccgccggcccgaGTGGAGGCCCGCGCCGCAGCCCTGA
Protein Sequence: MATVKRETDELLACRICLATNTKLFGLREHNLNDTFIDIMGPALSAWDGLPQHLCAWCRAELLRAAGLRARCHRAEDLLTQSLVHQHFITTNYLETLDRVAHQLTLCLTISSTATTDSTQEDTKQEKQEKIEAEDPEPELDDFDLYHPEFDEPIINLKNKMILENMKNTELRVELVKTDLEIKEQKNENRAKRVKKGVRKKERDERKKEKECKGKMKGIKKFFASEDDYTKFENTYNIEIVKLSEEEQLSEMQARKESSNYLRSAYKCERCFKGFLSETTYENHQKKTHEPSNGRNECGLCGARFRHPAGLRKHFESHTLKFICKICQFVTRHRSMAVMHADFHSGKTFVCKYCGLTFNKQTTFNTHTRVQHPLENARAGTCSACGETFTGKRGLQQHRAIAHKKLSTPELKCRVCLVQFDNLEAKQRHKENNICDPKLRACAACGARCADDAALDAHARDSHGKEHYKCDQCDTTFAKKSSLAVHFERVHLKIKPKKPAFYKYHQYGKGRLKIRNAEICEICGKGYPDTTWLRYHQRTHTGERPYKCSQCTKSYMTPAGLQRHVVIHTGVRRWQCSQCPKTFLHQSSIYTHKLVHTGEKPFVCQICSKAFTQSGSLQTHVKYVHMKLKPPPRRRRPEWRPAPQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00462687;
90% Identity: -
80% Identity: -