Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829532.1:7001050-7017839[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00025 0.017 16.3 1.0 1 23 413 435 413 435 0.96

2 20 0.0014 0.099 13.9 1.5 2 23 443 464 443 464 0.97

3 20 0.045 3.1 9.1 4.1 1 23 468 490 468 490 0.98

4 20 6e-05 0.0041 18.2 3.3 1 23 495 518 495 518 0.98

5 20 3.9 2.7e+02 3.0 0.0 3 11 525 533 524 546 0.81

6 20 0.54 38 5.7 0.0 2 19 557 574 557 577 0.94

7 20 0.0015 0.1 13.8 2.5 1 23 615 638 615 639 0.94

8 20 0.0075 0.52 11.6 2.6 2 23 665 686 664 686 0.96

9 20 0.00022 0.015 16.4 4.1 1 23 692 714 692 714 0.99

10 20 2.9e-06 0.0002 22.3 1.2 1 23 720 743 720 743 0.98

11 20 0.00078 0.054 14.7 1.3 1 23 1167 1189 1167 1189 0.96

12 20 2.9 2e+02 3.5 1.6 1 20 1196 1215 1196 1218 0.94

13 20 0.019 1.3 10.3 1.5 1 23 1222 1244 1222 1244 0.97

14 20 0.0005 0.035 15.3 4.1 1 23 1249 1272 1249 1272 0.98

15 20 5.4 3.7e+02 2.6 0.0 3 10 1279 1286 1278 1295 0.93

16 20 0.0015 0.11 13.8 0.1 2 21 1311 1330 1310 1331 0.93

17 20 0.00076 0.053 14.7 1.5 1 23 1369 1392 1369 1392 0.94

18 20 0.00042 0.029 15.5 0.2 2 23 1415 1436 1414 1436 0.96

19 20 3.8e-05 0.0026 18.8 6.1 1 23 1442 1464 1442 1464 0.99

20 20 6.9e-06 0.00048 21.1 0.7 1 21 1470 1490 1470 1491 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00025	0.017	16.3	1.0	1	23	413	435	413	435	0.96
2	20	0.0014	0.099	13.9	1.5	2	23	443	464	443	464	0.97
3	20	0.045	3.1	9.1	4.1	1	23	468	490	468	490	0.98
4	20	6e-05	0.0041	18.2	3.3	1	23	495	518	495	518	0.98
5	20	3.9	2.7e+02	3.0	0.0	3	11	525	533	524	546	0.81
6	20	0.54	38	5.7	0.0	2	19	557	574	557	577	0.94
7	20	0.0015	0.1	13.8	2.5	1	23	615	638	615	639	0.94
8	20	0.0075	0.52	11.6	2.6	2	23	665	686	664	686	0.96
9	20	0.00022	0.015	16.4	4.1	1	23	692	714	692	714	0.99
10	20	2.9e-06	0.0002	22.3	1.2	1	23	720	743	720	743	0.98
11	20	0.00078	0.054	14.7	1.3	1	23	1167	1189	1167	1189	0.96
12	20	2.9	2e+02	3.5	1.6	1	20	1196	1215	1196	1218	0.94
13	20	0.019	1.3	10.3	1.5	1	23	1222	1244	1222	1244	0.97
14	20	0.0005	0.035	15.3	4.1	1	23	1249	1272	1249	1272	0.98
15	20	5.4	3.7e+02	2.6	0.0	3	10	1279	1286	1278	1295	0.93
16	20	0.0015	0.11	13.8	0.1	2	21	1311	1330	1310	1331	0.93
17	20	0.00076	0.053	14.7	1.5	1	23	1369	1392	1369	1392	0.94
18	20	0.00042	0.029	15.5	0.2	2	23	1415	1436	1414	1436	0.96
19	20	3.8e-05	0.0026	18.8	6.1	1	23	1442	1464	1442	1464	0.99
20	20	6.9e-06	0.00048	21.1	0.7	1	21	1470	1490	1470	1491	0.97

Sequence Information

Coding Sequence: ATGATTTCCTGTGCCGTGCCTGGTTGCGGTTCGGAATCAAGCGTATCCATAGATTGTACGTTCCACCGGCTCCCCAGCTCTCCAATACCTCGCTCGCGATGGATCCTAGCCCTCGGCCCGCTGCCCACCAGTTCTTACGTCTGCAGCCACCACTTTGAACCAACTATGTTTATGAAGCATGGGAACACAAAGACACTGAAGCCAGATGCTGTGCCGAAGCTAATCTTGGATTCTTTGCTAAATGACGATCAGTGCCCAAATTTAAGTGAGTGCTCTGAAGAAGCCGGACCAAGTGGAGAGCTGGTGGCGTGCCGCGTCTGCCTCGCAGCGGACGGGCGGCTTTACGCTATCCGCGGCAGCGGCTTGGAAGACTCGCTTGCGACACTCACTGGAGTATCGCTCTCAGAGGCAGAAGGTATGCCACGTCACCTGTGTGTCTTCTGCCTCGCAAAGCTGTCAAAGTGCGCCGCTTTCCGTGATAGCTGTCAGCGGAGCACCGCGCTGCTGCAGACCCTTCTGGAGAGGGGCCCATTAAAAATGAACGTTATTAAGGCCATTAACCGAAATTCACACCAACTGACGACAAACCTCATGTGGAATAAACTCTTCCAATTCGGGACTGACCCTTTGTTTTCTACGTCGcctaaaattaaaactgaagaCGATGAGAATTCACACAAAATAACCGGCTTCATAGAAGTGGAATGTTTAGAAAACGAAGATCTTATCAAAAATGACACAAATTATCCAGAAATGCATACTTTTGAAATACAAATAGAAAAACAAGAATTACCAGAAACtaaaaaagttaaattgaaAGCCGAAAGTCCTAAATATAGAAAAGTTAAAGTGAAAACCGAAAGCCCTAACGCACACTCGGTAATAGATGACTACAAGGAATCTAAAGAGGAAATTGACACTAGTGACTTCGACACGGATTCATCTGATGAAGTACTCGTTACTCCAAAAAAGGGTACAAGAAAAAGAGTGAAATTGAAAAAAGTTACTGCAGCTAAATGtccaaaaaaacttaaaaatacaaaaaacaaagTGGACGATTTCCCCACTGGCTTAGGCACTGATACATCTGAAAAACTAATCAGATCGAGGAAGAGAGTTCGAAATCCTGATATTGATTCAGCGTTCGATAGAAAATACAACTGTAAAACAACACTATTGAGTAAAGAGGAACAGAAGCAAGAGATAGAGGAGAGGAAAAAGAGTAAGAAGTCTGCGTATAACTGCGACGTGTGCGGGAAAGGGTACAAGACAGAAAGCACTTTAATGACGCACAAGACCTACCACGACCCGACAAGTTTGCCGGCCGAGTGTGACGTGTGTCTGCTCCGGTTTCGGTCCCGGCGCAGTCTGCTGAAACACCAGAACACTCACCGTGCGACCTTTACGTGCAACGAGTGCGGCTACGTCAGTCGTCACAGAACGCACGCGAAAGACCATTCTCTCACGCACAAGGGTGCAACGTACACCTGCCCATATTGCCAGAAAGTGTACAACCATCAGACCTCGTACTACAACCACATCCGGATACAGCACCCCGGGCAAAACGAGGCCTGCGACGAGTGCGGGGAGACGTTCGCCGCGGGGAGGGGGATCATGCTGCACAAGGCGCGCGCGCACAAACAGTACGGCAAACCAAACATAGTGCCCAAATGTACAGTTTGTGAAGTTACGTTCTTGACCGCCGAAGCACTGCAAAGGCATGAAGAGTTAAGTGCGGGCGCGGCGCATGCGCTGTGGCCGTGTGCCGCGTGCGGCGAGAGCTGCGCCAGCGACGCCGCGCGCACCGCGCACAGCGCGGAGAAACACCCGCCCATCGCTCGGCATTATTGTAAAGAGTGCGACAAGACGTTCGCGAGCGCGGGGTCGTTCGCGCTGCACGTGGACCGCAAGCATCACAACCGGCGCGTGCTGAGCGACCCGGAGCGTCCGCGCGAGCCGCGCCTCGGCGTCGCGCCCAGCGACTATCCCTGCGTTTGCGAGATATGCGGCAAGCGGTACTCGTGTCTGGCGACGCTGCAGTACCATATGAACGTGCACTTGGGCCTCAAGCCATTCCAGTGTCCTCACTGCCCCAAAGCTTTCCCCCACCAAGGCCAACATAGGATGCATATGCGGGTGCATACAGGCGAGCGGCCCTACCAGTGCAAGCAATGCCCGCAGGCATTCTCTCGGCGGAATAACTTCGCGAAACACGTGAGAACCGTTCATTTGCGGGAGCAGGTGAAGTGCGATAAATGTGGCAAGCTGATGAGCATCGCGTCGATCACGGCGCACGTGCGCGCCGTGCACATGAACATGCCCCTCCCCAGCTCGCTGATACCTCGCTCGCGATGGATCCTGGCCCTCGGCCCGCTGCCCCACAGTTCTTATGTCTGCAGCCTCCACTTTGAAGCGAGCATGTTTATAAAGCATGGGAACAAAAAGACACTGAAGCTAGATGCCGTGCCAAAGCTGTCTTTGGATTTTTCACCGAACAACGAACCCTGTTCTAATTTGAGCGAGTGCCCTGACGAAGCGGGCCCGCGCGGCGAGCTGCTGGCGTGCCGCGTCTGCCTCGCGACGGACGGGCGGCTGTACGCTATACGCGGCAGCGGCTTGGATGACTCGCTCGCGGTTCTGACTGGGGTAGTGttgtcAACGGAAATGAGTATGCCGCGCCACCTGTGCGTGTTCTGCCTCGCGAAGCTGTCCAAGTGCGCCGCCTTCCGTGACAGCTGTCAGCAGAGCACCGCGCTGCTGCAGACCTTACTAAAGACGGGTCCAttaaAACTGAATAAAATCAAGGCTATTAAGCGAAATTCACACCGACTAACGAAGAACCTGACTTGGAATAAGCTTTACCAATTCGGAACCGGCCCATTGTTTACCACACCTCAGATTAAAACTGAAGACGATGAAAATTCACACAAACTAACCGGCTGCATAGATATACAATATTTAGAAAGAGAagattttgtaaaaaattatacaaatgaTGCAAACAAGCGTGCTTTGGAAGTACCCAtagacaaacaaaaaatatctgAAACGAAAAAAGTCAGTTTGAAAATGGAAACTCCTAGATATAAAAAGGTATATGTGAAAACTGAAATTCCTAACACAAACTCAGAAATAGACGACGACCAAGAATCTAAAGAGGGAAATGATACCATCGACTTTGACACGGATACATCAGAAGAACCACTCGCTACACTAAGAAAAGCTAAGAGAAAAAGAGTGAAATTGGAAAAGGAGATTACATATACAGCCAAATGCCCAAGGAACCATAAAccccttaaaattaaaatacacgtTATCCCGAATGACAAAGACAGTGGCTCATCTAAAAAACCAATCAGACCGAGGAAAAAGCATGATATTAAAAGTGCAGAAGACAACTcggcttttgataaaaaatacaactgtaaAACAAAAGTTTTGAGTAAAGAGGAGCAGAAACAGGAGATAGAAGACAGGAAAAGGAATAGCAAGTCTGCGTTTACCTGCGACGTGTGCGGGAAGGGGTACAAGAAAGAAGGCACTTTAAAGACGCACAAGACCTACCACGACCCGAAAGGTTTGCCGTTCGAGTGCGACGTGTGCCTGCTCCGGTTCCCGTCCCGGCGCAGTGCGCTGAAGCACCAGGACTGCCACCGGGCCACCTTCACGTGCAACGAGTGCGGCAACGTCAGCCGGAACAGGTCGCACGCGAAAGACCATTCCCTCATGCACAAGGGCACCACGTACACCTGCCCATATTGCCACATAGTCTACAACCACCAGACCTCGTACTACAACCACATCAGGGTTCAGCACCCCGGGCAAAACGAGGCTTGCGACGAGTGCGGGGAGACCTTCGCCGCGGGCCGGGGGATCTTGCTGCACAAGGCCTTGGCGCACAAGCAGCCCGACAAAGGAAACATAGACACCAAATGCACGGTTTGTGAAGTCACGTTCTCCAGCGCAGAAGCGCTACAAAGACATGAAAAATCGGGTCCTGGCGCGGCGCATGCGCTGTGGCCGTGCGCCGTGTGCGGCGAGAGTTGCGCCAGcgacgccgcgcgcgccgcgcacgTGGCAGAGACGCACCCGCCCGTAGCTCTGCATTATTGTAAAGAGTGCGATAAAAACTTCTCGAACGCGGCGTCGTTCGCGCTGCACGTGGACCGCAAGCACAAGAACCGGCGCGCGGCGGAGGCCCCGTTCCGGCCGCGGCCCGGCGTCGGACGCGTCCGGTCCACCGTGTGCGAGATATGCGGCAAGATGTACCAGAACCTGACAATGCTGCAGTACCATATGAATGGGCACTTGGCTGTGAAACCTTTCCAGTGCCCCCATTGCCCCAAGGCGTTCACCCACCAAAGCAACCATAggTTGCACATGCGGGTGCACACAGGCGAGCGGCCCTACCAGTGCGAGCAATGCCCGCAGGCCTTCTCTAGGCGGGGTAACTTCACGAAACACATGAAAAACGTGAGTAACCTACAATGA
Protein Sequence: MISCAVPGCGSESSVSIDCTFHRLPSSPIPRSRWILALGPLPTSSYVCSHHFEPTMFMKHGNTKTLKPDAVPKLILDSLLNDDQCPNLSECSEEAGPSGELVACRVCLAADGRLYAIRGSGLEDSLATLTGVSLSEAEGMPRHLCVFCLAKLSKCAAFRDSCQRSTALLQTLLERGPLKMNVIKAINRNSHQLTTNLMWNKLFQFGTDPLFSTSPKIKTEDDENSHKITGFIEVECLENEDLIKNDTNYPEMHTFEIQIEKQELPETKKVKLKAESPKYRKVKVKTESPNAHSVIDDYKESKEEIDTSDFDTDSSDEVLVTPKKGTRKRVKLKKVTAAKCPKKLKNTKNKVDDFPTGLGTDTSEKLIRSRKRVRNPDIDSAFDRKYNCKTTLLSKEEQKQEIEERKKSKKSAYNCDVCGKGYKTESTLMTHKTYHDPTSLPAECDVCLLRFRSRRSLLKHQNTHRATFTCNECGYVSRHRTHAKDHSLTHKGATYTCPYCQKVYNHQTSYYNHIRIQHPGQNEACDECGETFAAGRGIMLHKARAHKQYGKPNIVPKCTVCEVTFLTAEALQRHEELSAGAAHALWPCAACGESCASDAARTAHSAEKHPPIARHYCKECDKTFASAGSFALHVDRKHHNRRVLSDPERPREPRLGVAPSDYPCVCEICGKRYSCLATLQYHMNVHLGLKPFQCPHCPKAFPHQGQHRMHMRVHTGERPYQCKQCPQAFSRRNNFAKHVRTVHLREQVKCDKCGKLMSIASITAHVRAVHMNMPLPSSLIPRSRWILALGPLPHSSYVCSLHFEASMFIKHGNKKTLKLDAVPKLSLDFSPNNEPCSNLSECPDEAGPRGELLACRVCLATDGRLYAIRGSGLDDSLAVLTGVVLSTEMSMPRHLCVFCLAKLSKCAAFRDSCQQSTALLQTLLKTGPLKLNKIKAIKRNSHRLTKNLTWNKLYQFGTGPLFTTPQIKTEDDENSHKLTGCIDIQYLEREDFVKNYTNDANKRALEVPIDKQKISETKKVSLKMETPRYKKVYVKTEIPNTNSEIDDDQESKEGNDTIDFDTDTSEEPLATLRKAKRKRVKLEKEITYTAKCPRNHKPLKIKIHVIPNDKDSGSSKKPIRPRKKHDIKSAEDNSAFDKKYNCKTKVLSKEEQKQEIEDRKRNSKSAFTCDVCGKGYKKEGTLKTHKTYHDPKGLPFECDVCLLRFPSRRSALKHQDCHRATFTCNECGNVSRNRSHAKDHSLMHKGTTYTCPYCHIVYNHQTSYYNHIRVQHPGQNEACDECGETFAAGRGILLHKALAHKQPDKGNIDTKCTVCEVTFSSAEALQRHEKSGPGAAHALWPCAVCGESCASDAARAAHVAETHPPVALHYCKECDKNFSNAASFALHVDRKHKNRRAAEAPFRPRPGVGRVRSTVCEICGKMYQNLTMLQYHMNGHLAVKPFQCPHCPKAFTHQSNHRLHMRVHTGERPYQCEQCPQAFSRRGNFTKHMKNVSNLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00342259;
90% Identity: iTF_00342259;
80% Identity: iTF_00342259;