Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829533.1:6829203-6832466[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00028 0.019 16.1 1.9 1 23 317 339 317 339 0.98

2 18 0.012 0.86 10.9 0.1 2 21 360 379 359 380 0.94

3 18 0.00052 0.036 15.2 1.6 1 23 404 426 404 426 0.99

4 18 0.19 13 7.2 0.1 1 21 432 452 432 453 0.94

5 18 0.29 20 6.6 0.2 1 20 528 547 528 549 0.93

6 18 0.0017 0.12 13.6 5.5 2 23 554 575 553 575 0.97

7 18 0.00031 0.021 16.0 3.6 1 23 581 604 581 604 0.98

8 18 0.00056 0.039 15.1 2.5 1 23 614 636 614 636 0.98

9 18 0.019 1.3 10.3 3.0 1 23 645 667 645 667 0.97

10 18 0.0033 0.23 12.7 2.2 1 23 673 695 673 695 0.99

11 18 9e-05 0.0062 17.6 3.1 1 23 701 723 701 723 0.96

12 18 7.4e-07 5.1e-05 24.2 1.8 1 23 729 751 729 751 0.99

13 18 7.5e-06 0.00052 21.0 7.4 1 23 757 779 757 779 0.99

14 18 0.00016 0.011 16.8 0.8 3 23 787 807 785 807 0.98

15 18 9.2e-05 0.0064 17.6 4.6 1 23 813 835 813 835 0.98

16 18 1.1e-06 7.8e-05 23.6 5.9 1 23 841 863 841 863 0.99

17 18 0.0016 0.11 13.7 2.1 1 23 870 892 870 892 0.97

18 18 0.00058 0.04 15.1 0.6 1 23 897 919 897 919 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00028	0.019	16.1	1.9	1	23	317	339	317	339	0.98
2	18	0.012	0.86	10.9	0.1	2	21	360	379	359	380	0.94
3	18	0.00052	0.036	15.2	1.6	1	23	404	426	404	426	0.99
4	18	0.19	13	7.2	0.1	1	21	432	452	432	453	0.94
5	18	0.29	20	6.6	0.2	1	20	528	547	528	549	0.93
6	18	0.0017	0.12	13.6	5.5	2	23	554	575	553	575	0.97
7	18	0.00031	0.021	16.0	3.6	1	23	581	604	581	604	0.98
8	18	0.00056	0.039	15.1	2.5	1	23	614	636	614	636	0.98
9	18	0.019	1.3	10.3	3.0	1	23	645	667	645	667	0.97
10	18	0.0033	0.23	12.7	2.2	1	23	673	695	673	695	0.99
11	18	9e-05	0.0062	17.6	3.1	1	23	701	723	701	723	0.96
12	18	7.4e-07	5.1e-05	24.2	1.8	1	23	729	751	729	751	0.99
13	18	7.5e-06	0.00052	21.0	7.4	1	23	757	779	757	779	0.99
14	18	0.00016	0.011	16.8	0.8	3	23	787	807	785	807	0.98
15	18	9.2e-05	0.0064	17.6	4.6	1	23	813	835	813	835	0.98
16	18	1.1e-06	7.8e-05	23.6	5.9	1	23	841	863	841	863	0.99
17	18	0.0016	0.11	13.7	2.1	1	23	870	892	870	892	0.97
18	18	0.00058	0.04	15.1	0.6	1	23	897	919	897	919	0.97

Sequence Information

Coding Sequence: ATGTCATTACAATGTGTGAAGGACGAAGTGGAGTGGGAAGCCGAGTATGTGGAGGAGCTCTGGAGGACCCTGTACGCCACCCACGACCTCGAGCCGGCGCTCGCGCTCGGCCCCGAGGCCACAGGGGTCCAGGATATCGCGTTGCAAGCTGCCAGAGGATGTGTAGCTGTTGCTGGCGACCTACAATCCAGGACAGAAGCCGCACAAGACTCTGAGGATGTCCTGTCTACCCAATGCAGAGAATCGAGTGTTagaaacacaattaaaacagaAGCAACACTGGACCGTATGGAGGTTTCTGGCACCCAATCTAATCCTGCAAACCTAAATACTGATAAGACCCCTAAGACTGAAGTTGTTCAGAACCCCAACATTTTTTCCATGCGCCTTGTCAGCTCCAGTGCTGGTAAGGCAGCTAGAGAAGCAGTGTGTGTCATCAGAGACAGTCCTAGCACCATCCCTAATGTTGAACACCTTGGTGATACTCAAACGCCTAAAACAGAACCTGTTGAAGACCTCAGAGATGTTTCTAGCACCCCTACAAGCCTTGAAAATCTCAATGCTACTCAGACACCTAAAACGGAACCTGCTGAAAGTCTCAGAGATGTTTCTAGCCCTGAAAATCTTGGTAAAAAACTTGTAGACTCTACTGCTAGTAACACAGCCAAAACTCAAGCGACTCAGGACCAAAAAAATTATTCTGGCATCAACTTTAGTGTTAAAGATCCCAGTGCTAGTAAGACCTCTAATAGAGCAACATATGATCCTGGCGAGGCTTCTATCAGCTGCAAAGACTCTAATGCTAATATGACAGCTGAGATTGAAGCAGCATCTACTAGACTTGAAGACGGTAGTACTATTGAAAGACCTAgtcttttcaaaaaaaaaaggccaATCCTCACCAAGCCTTGCTCTGTTAAGCTCGAACGCAAAGCACTCAAGAGTGGCTTTGTATGCCAAATATGCCAAAAGATTTCCAACTACAAACACAACCTCATGAATCATATATTATCTCACACTCAAGCAGAGATTGCAACCATTAAATTCGAaaagaaaataatcaaaaaaccAAACTTAAACTGCCACATTTGCGGCAAAGGGTTAGCTAATAGAAATAGTTTACTTGGACACCTCAGACTCCAAAAATGCGATCCTGTCAGAGAACAGATGCTGCGTAGAAAAACTGAAGATATTTTGACTAGGACTTATTACACCTGTGACCTTTGTGGGATGTCGACATTAAGAAAAACTAGCCTTATGAAGCACATGAAAAGACACGCAAAGGAGGAACCTTTCGTCTGTCAAGTCTGCAAGCAACAATTCAAAGCGGCATGGGAGATGTTTGATCATATTAAACTTGCAGCTTGCAAGCCTAGTGAAGAATCTCAGAGTAAACCCAAACCTCGCTCCGTTGAAAATATGTTAAAAGATATAGCCTTAAAGCCCTGCTATGTTAATCTCGAACGCATTAAGAAAGAAAATGCAGGCAATACTGTGATAATAAATGAAGCTACAAGCTTTACTGGGAGCGAAGAAGAGTTATTTGATGAAGATGACGCTTTTGAGACTGAAGAAGAAACATACTATTGTGGAGTCTGTGAGGTACAGTTTGAGACCTTATCTTCACTTGGTGACCATGTCTGCGATCCCAAGAAACTGTCGTGCAATGTTTGCAAGAAACGATTCAAGCACCAGTGCACTTTGGATGAACACTTACGGATTCACACTGGTGAGAAACCGTTCACTTGCAACGAGTGTCAAAAACTGTTCCGTTTGAAACATAGCTTAAGATTGCATATTCAAACGATGCATGGTAGCCAAATTGGCCAATACTTAGGTTACTCTTGTAAACTTTGCAAAGAAAAGTTCCGTAGCGGTTTCTCATTGAAAAAACATGTCCTGACTCACACCAGGGAGACAGTCAAAAAGCCTTATTCTTGTAAAACGTGTAAAAAGGAGTTTAGATACAAGGGGGAATGTGTTGCCCACGAACGGGTGCATACAGGCGAGAAGCCTTTTAAGTGTACAGAATGCCACAATGAGTATCGAGTGGTAAGTGATCTGCGAATCCACAGCCGGACGCACTCTGGAGTCCAACCATATACCTGTGAGTATTGCAACAGATCGTTCCGTACATGGCAGTTGTGGGACCACCACAAACGCGTTCATACCAACGAGAGACCGTTCAAATGTGACACTTGCAATAAACAGTTCAAGAGACCAGATACGCTGATAGTACACAGACGGACTCACACCGGGGAACGGCCGTATGTGTGTAAGTTTTGCTCGAAGCGGTTCAAACAGCGATCTCATCTGAAGTCCCATCAGAAGACGCACACGGGTGAGAAACCTTTCGGTTGCGATATTTGTAACAAACGGTTTTCAGAGCCGAATAAACTGAGGAATCATAGCCGGGTACATTCTGAAGAAAGACCTCACTCGTGCGATGTATGCCAAAAGTCTTATAAAGACAGTCAAACGCTGAAGACTCATAAACGGACCCACACCGGAGAGAAACCTTATCAATGCAAAATTTGTAAAAAGCAGTGCTCACAGTCCTCCAATTTGAGAACACATATGAAGACTCACGGTAAAAAGACTTGGCCGTACAGCTGTTACGTTTGTGAGAAGAGATTCCAGACCCGGTTGTATTTGAACAGGCATCTGTCGCTGCACGACGGACAGACGCACATGTGTGACGTGTGCGGGGCCAAGTTCAGGAGCAGACAGGTTTTGAGCGCGCATGCGCGCACCCATTATGGCGGTGAATGA
Protein Sequence: MSLQCVKDEVEWEAEYVEELWRTLYATHDLEPALALGPEATGVQDIALQAARGCVAVAGDLQSRTEAAQDSEDVLSTQCRESSVRNTIKTEATLDRMEVSGTQSNPANLNTDKTPKTEVVQNPNIFSMRLVSSSAGKAAREAVCVIRDSPSTIPNVEHLGDTQTPKTEPVEDLRDVSSTPTSLENLNATQTPKTEPAESLRDVSSPENLGKKLVDSTASNTAKTQATQDQKNYSGINFSVKDPSASKTSNRATYDPGEASISCKDSNANMTAEIEAASTRLEDGSTIERPSLFKKKRPILTKPCSVKLERKALKSGFVCQICQKISNYKHNLMNHILSHTQAEIATIKFEKKIIKKPNLNCHICGKGLANRNSLLGHLRLQKCDPVREQMLRRKTEDILTRTYYTCDLCGMSTLRKTSLMKHMKRHAKEEPFVCQVCKQQFKAAWEMFDHIKLAACKPSEESQSKPKPRSVENMLKDIALKPCYVNLERIKKENAGNTVIINEATSFTGSEEELFDEDDAFETEEETYYCGVCEVQFETLSSLGDHVCDPKKLSCNVCKKRFKHQCTLDEHLRIHTGEKPFTCNECQKLFRLKHSLRLHIQTMHGSQIGQYLGYSCKLCKEKFRSGFSLKKHVLTHTRETVKKPYSCKTCKKEFRYKGECVAHERVHTGEKPFKCTECHNEYRVVSDLRIHSRTHSGVQPYTCEYCNRSFRTWQLWDHHKRVHTNERPFKCDTCNKQFKRPDTLIVHRRTHTGERPYVCKFCSKRFKQRSHLKSHQKTHTGEKPFGCDICNKRFSEPNKLRNHSRVHSEERPHSCDVCQKSYKDSQTLKTHKRTHTGEKPYQCKICKKQCSQSSNLRTHMKTHGKKTWPYSCYVCEKRFQTRLYLNRHLSLHDGQTHMCDVCGAKFRSRQVLSAHARTHYGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -