Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829530.1:2175438-2182537[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1e-05 0.00072 20.6 1.1 2 23 93 114 92 114 0.96

2 13 0.0019 0.14 13.4 6.2 1 23 120 142 120 142 0.98

3 13 6.9e-06 0.00048 21.1 3.6 1 23 148 170 148 170 0.98

4 13 1.8e-05 0.0013 19.8 2.2 1 23 176 198 176 198 0.98

5 13 1.4e-05 0.00096 20.2 1.5 1 20 204 223 204 226 0.94

6 13 1.3e-05 0.0009 20.3 3.6 1 23 232 254 232 254 0.98

7 13 3.2e-05 0.0022 19.1 2.5 1 23 260 282 260 282 0.98

8 13 2.5e-06 0.00017 22.5 3.9 1 23 288 310 288 310 0.98

9 13 1.3e-06 9e-05 23.4 3.1 1 23 316 338 316 338 0.98

10 13 0.00012 0.0081 17.3 3.5 1 23 344 366 344 366 0.99

11 13 2.7e-06 0.00019 22.4 1.0 1 23 372 394 372 394 0.97

12 13 3.6e-06 0.00025 22.0 1.2 1 23 400 422 400 422 0.98

13 13 0.00025 0.017 16.3 2.5 1 19 428 446 428 448 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1e-05	0.00072	20.6	1.1	2	23	93	114	92	114	0.96
2	13	0.0019	0.14	13.4	6.2	1	23	120	142	120	142	0.98
3	13	6.9e-06	0.00048	21.1	3.6	1	23	148	170	148	170	0.98
4	13	1.8e-05	0.0013	19.8	2.2	1	23	176	198	176	198	0.98
5	13	1.4e-05	0.00096	20.2	1.5	1	20	204	223	204	226	0.94
6	13	1.3e-05	0.0009	20.3	3.6	1	23	232	254	232	254	0.98
7	13	3.2e-05	0.0022	19.1	2.5	1	23	260	282	260	282	0.98
8	13	2.5e-06	0.00017	22.5	3.9	1	23	288	310	288	310	0.98
9	13	1.3e-06	9e-05	23.4	3.1	1	23	316	338	316	338	0.98
10	13	0.00012	0.0081	17.3	3.5	1	23	344	366	344	366	0.99
11	13	2.7e-06	0.00019	22.4	1.0	1	23	372	394	372	394	0.97
12	13	3.6e-06	0.00025	22.0	1.2	1	23	400	422	400	422	0.98
13	13	0.00025	0.017	16.3	2.5	1	19	428	446	428	448	0.96

Sequence Information

Coding Sequence: ATGACTGTGGAATGTGAGCCTGTTAAGAAGGAGCCAGAATGGGATGACTCAAATTTAAGTGAGACTGCAGACCAGCATACCTGTGAGATCGAAATGAGAGCTGAGTGCGAGCGTGAGAAGGAGAAGTGGTGCGAGTGTAGTGCGAGCGAGACGGCTGCGAGGGCTGGCCAGAATCAAGGGACTAAAGTCGAAATCGTGATAGAACCAGAACTGCAACAACCACAAGGCAATTCAATGCAAACAAAACTTTCCCACATTACAAAAGTTAACAAATTAAGTTGCTATGTATGCAACAAGCAATTTGCTAAATCATCTCTTTTGAAGCGTCATCAACAAGTTCACACAAAAGAGAAACGATACAGTTGCGATATCTGTCACAAAGACTTTCTTAAAAGACATCATTTAACAGATCACATCAGAGTGCACACGGGTGAGAAACCATATAGCTGTGGCATATGTCACAAGCAGTTCACAAGATCATCCTACTTAAACTCGCACAAACAAGTTCACACAAAAGAGAAACAGTACTCTTGTGATATCTGTCACAAGCAGTTTGGACAACAACATCAGTTGGTTGGTCACATAAGGGTGcacacaggtgagaaaccaTATAGTTGTGACATCTGCCATAAACAGTTCGCACAGTCGTCCAATTTGAATAATCACAAGTGGGTTCATGCAAAAGAGAAAAGATACTCTTGTGGTATATGTCAGAAACAATTTGGACAAAAACATCATTTGACTGGTCACATGAGGGTTCACACGGGAGAGAAACCATTCAGCTGTGACATATGCAACAAACAGTTTGGAACAGCATTTCATTTGAAGTCTCACAGACAAGTTCACATGGCTGAGAAAGATTTTTCTTGCGATGTATGCCAGAAACAGTTTCCTCAACGACATCACTTAACAGTTCACATGAGAGTGCACACAGGAGAGAAACCTTTTACTTGTAACACATGCAACAAACAGTTCACAAAATCATCCAATTTAAAGTCACATGAACGTGTCCACAAGCAAGAAAAACAGTATACTTGTGACACATGCCAGAAACAGTTTGCACTGCGGCATCATTTAATTGGTCACATGAGGGTTCACACGGGTGAGAAACCATTTAACTGTGACATATGCAACAAAAATTTCGCAAGATTATCCAATTTAAAGTTACATAAACAGATTCACACTAATGAACAGCAATACTCATGTGATGTGTGTCAGAGACTGTTTGCACAGCAAAGTCATTTGACTGGTCACATGAGAGTGCACACAGGCGAGAAACCATACAGCTGCGACATATGCAGCAAACAGTTTGCAAGATCACACAGTTTAAAACATCATAAAGTCTGCCACTGGAAGGTGATCAAGCCTCACAAAACCACTCCTGAGCTGCTCGGTGCTCCTGTTGCAGCGAGGCCCCGCCCCCGGGCAGGTGTGGGTGCACTCGGGCGCGGCGTCGGCGCCACCTACTTTGGCTTGTGTAAGTTCTCCTCTTTGATGAGCAcatcttaa
Protein Sequence: MTVECEPVKKEPEWDDSNLSETADQHTCEIEMRAECEREKEKWCECSASETAARAGQNQGTKVEIVIEPELQQPQGNSMQTKLSHITKVNKLSCYVCNKQFAKSSLLKRHQQVHTKEKRYSCDICHKDFLKRHHLTDHIRVHTGEKPYSCGICHKQFTRSSYLNSHKQVHTKEKQYSCDICHKQFGQQHQLVGHIRVHTGEKPYSCDICHKQFAQSSNLNNHKWVHAKEKRYSCGICQKQFGQKHHLTGHMRVHTGEKPFSCDICNKQFGTAFHLKSHRQVHMAEKDFSCDVCQKQFPQRHHLTVHMRVHTGEKPFTCNTCNKQFTKSSNLKSHERVHKQEKQYTCDTCQKQFALRHHLIGHMRVHTGEKPFNCDICNKNFARLSNLKLHKQIHTNEQQYSCDVCQRLFAQQSHLTGHMRVHTGEKPYSCDICSKQFARSHSLKHHKVCHWKVIKPHKTTPELLGAPVAARPRPRAGVGALGRGVGATYFGLCKFSSLMSTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -