Basic Information

Insect: Clepsis dumicolana
Gene Symbol: Hivep1
Assembly: GCA_963691665.1
Location: OY829532.1:6816209-6819785[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.3e-06 0.00023 22.2 2.2 1 23 188 210 188 210 0.99

2 14 0.00017 0.012 16.7 0.4 1 23 216 239 216 239 0.94

3 14 0.0012 0.082 14.1 10.9 1 23 256 278 256 278 0.97

4 14 5.2e-06 0.00036 21.5 3.9 3 23 286 306 285 306 0.97

5 14 0.0022 0.16 13.2 2.1 1 23 312 334 312 334 0.97

6 14 4.1e-07 2.9e-05 25.0 2.4 1 23 340 362 340 362 0.96

7 14 9e-06 0.00062 20.8 3.7 1 23 368 390 368 390 0.97

8 14 2.3e-07 1.6e-05 25.8 1.4 1 23 396 418 396 418 0.98

9 14 3.3e-05 0.0023 19.0 0.3 1 23 424 446 424 446 0.97

10 14 2e-06 0.00014 22.9 2.2 1 23 452 474 452 474 0.96

11 14 0.0019 0.13 13.5 4.1 1 23 480 502 480 502 0.98

12 14 6e-07 4.2e-05 24.5 5.1 1 23 508 530 508 530 0.97

13 14 2.2e-06 0.00016 22.7 2.8 1 23 536 558 536 558 0.98

14 14 1.3e-06 9e-05 23.4 1.2 1 23 564 587 564 587 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.3e-06	0.00023	22.2	2.2	1	23	188	210	188	210	0.99
2	14	0.00017	0.012	16.7	0.4	1	23	216	239	216	239	0.94
3	14	0.0012	0.082	14.1	10.9	1	23	256	278	256	278	0.97
4	14	5.2e-06	0.00036	21.5	3.9	3	23	286	306	285	306	0.97
5	14	0.0022	0.16	13.2	2.1	1	23	312	334	312	334	0.97
6	14	4.1e-07	2.9e-05	25.0	2.4	1	23	340	362	340	362	0.96
7	14	9e-06	0.00062	20.8	3.7	1	23	368	390	368	390	0.97
8	14	2.3e-07	1.6e-05	25.8	1.4	1	23	396	418	396	418	0.98
9	14	3.3e-05	0.0023	19.0	0.3	1	23	424	446	424	446	0.97
10	14	2e-06	0.00014	22.9	2.2	1	23	452	474	452	474	0.96
11	14	0.0019	0.13	13.5	4.1	1	23	480	502	480	502	0.98
12	14	6e-07	4.2e-05	24.5	5.1	1	23	508	530	508	530	0.97
13	14	2.2e-06	0.00016	22.7	2.8	1	23	536	558	536	558	0.98
14	14	1.3e-06	9e-05	23.4	1.2	1	23	564	587	564	587	0.97

Sequence Information

Coding Sequence: ATGTCGGTGGAGATTGTGCGCGTAAAAGAAGAACCGCGGTGGGAAGATGAAAGCGAGGCAGCGGTAATCTCGGGCTCTGGACACAATGTCAAACTGGAGGTTGACACAACCCAAAATGTTAAAATCGAGGTGGAATTACAATCGGAACTGATCCTGCCGGATTATATAGAGAATTCTAACCAAGATCCGTTGGAGCATCATGCACCAGTATATATCAAGCAGGAGCCCCAAGACAGTGCTGATGGAACTTCCATGTCTGCGGGCCAGAATGAGATGTGTCACAGAGAGGGTTTGGTCCCTGGGGACACTCGGAACCAGTTGGGGAACAACTGTAACATCAAAGTTGAATGCTTAAACTctgataattataataagctGGACTTGCACAACTACGACGAAAACAATGTACAtagatttagttttaattacccGGATGACAAGAAAGATGAAGGTGCAAGAGATTTAGAAGTTGTGATCGAAACCAAAgaagaaattaataacaaaacgAAATTGCCTAAGAAAATTAGAAAACCGCGTCAGTATAAAAAGGAAAAGAATATTTTCACGTGCGACTATTGCAAAAGAGACTTCGTGCATAAAAGTCTTTTGATAGATCATATCAGAATGCACACGGGTGCAGACCCTTACTTGTGTGAAGCATGTCAGAAACCGTTTATAACTTACAGTAGTTTGAAGCGCCACTCACGCGTTGTCCACAAGATTATTTTGAAACAACACACGAAAATTCACACGGGCGAGAAAGCCCATTCCTGCCACATCTGTTACAAGCAATTTTCACGTAAACACCACTTTCGTGACCACATGCTTATTCACACACAGCAGAAATCAGAATGCTGTCAGGTGTGCAATAAACAGTTTTCACGAAAGTCCACCTTGGTGAACCATATGAGAATTCACACAGGCGAGAAACCTTTCAGGTGTGAAGTGTGCAATAACCACTTCCGACGAGAAAACGATTTGAAATTACACTCGCTCGTTCACACGGGGCTGAAACCGCATGCGTGCAAAGTTTGCCAAAAAGTGTTCTCAAGGAGCTCCACACTGTCGACCCATATGAGGATTCACACAGGCGAGAAACCACACACTTGTCCAGTTTGTAAGAGACAGTTTTCACACAAGGACACTTTGAATAAGCACATAGAAATTCACTCGAGTGAAAAACCCTTTTCATGCGACGAGTGCCCGAAAACGTTTCGTCGCCAATCTTATTTGATTTCACATAAGCGCATTCACACAGGCGAAAGACCATACGCATGCCAAATCTGTAACAagacatttttacaaaaaagcaACTTGTCTGCACATGTTTTGATCCACAAAGGAGAGAAACCTCACGCGTGCCAAGTGTGTGAGAAACGGTTCACACAGAAAGACACTCTAACTAAACACATGCTGATTCACACGGGCGAGAGAGAATTTGTATGTGAGATCTGCAACAGACAGTTCAGGATCAAGTGTCACCTTGTGGAACACAGACTCACCCACACGGGCGAGAAACCGCACAGCTGCAATATTTGCCACAAACGTTTTTCTCAAAAGGGGAGTCTGAACAAGCACATAAGAATTCACACTGGTGAAGAGCCGTTTTCGTGCGAATTTTGTAAAAAGCAATTCAAGGATCGCTCTAATTTAATTCAACATCAGCGACTCCATTCTGGGGCGAAGCCTTACGCTTGTCAAATTTGTAGTAAACTATTTTCAAACAAGTCTAACGTGACTAAACATATGAGGCGGGTCCACGCGGACAAGGAAGATCTCAGCTTAGAAGAGTTCATAGCAGCTGCCACAAGTGAATCgaacgaatga
Protein Sequence: MSVEIVRVKEEPRWEDESEAAVISGSGHNVKLEVDTTQNVKIEVELQSELILPDYIENSNQDPLEHHAPVYIKQEPQDSADGTSMSAGQNEMCHREGLVPGDTRNQLGNNCNIKVECLNSDNYNKLDLHNYDENNVHRFSFNYPDDKKDEGARDLEVVIETKEEINNKTKLPKKIRKPRQYKKEKNIFTCDYCKRDFVHKSLLIDHIRMHTGADPYLCEACQKPFITYSSLKRHSRVVHKIILKQHTKIHTGEKAHSCHICYKQFSRKHHFRDHMLIHTQQKSECCQVCNKQFSRKSTLVNHMRIHTGEKPFRCEVCNNHFRRENDLKLHSLVHTGLKPHACKVCQKVFSRSSTLSTHMRIHTGEKPHTCPVCKRQFSHKDTLNKHIEIHSSEKPFSCDECPKTFRRQSYLISHKRIHTGERPYACQICNKTFLQKSNLSAHVLIHKGEKPHACQVCEKRFTQKDTLTKHMLIHTGEREFVCEICNRQFRIKCHLVEHRLTHTGEKPHSCNICHKRFSQKGSLNKHIRIHTGEEPFSCEFCKKQFKDRSNLIQHQRLHSGAKPYACQICSKLFSNKSNVTKHMRRVHADKEDLSLEEFIAAATSESNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -