Basic Information

Insect: Clepsis dumicolana
Gene Symbol: -
Assembly: GCA_963691665.1
Location: OY829533.1:6342583-6356126[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 4.7e-06 0.00032 21.7 4.2 1 23 115 137 115 137 0.98

2 26 0.0003 0.021 16.0 6.6 1 23 143 165 143 165 0.97

3 26 1.2e-06 8.1e-05 23.6 0.8 1 23 175 197 175 197 0.98

4 26 0.00012 0.0081 17.3 2.7 1 23 203 225 203 225 0.96

5 26 2.9e-06 0.0002 22.3 1.6 1 23 231 253 231 253 0.98

6 26 2e-05 0.0014 19.7 3.3 1 23 259 281 259 281 0.99

7 26 0.0018 0.13 13.5 0.1 3 23 374 394 373 394 0.98

8 26 0.00023 0.016 16.3 2.2 2 23 401 422 400 422 0.94

9 26 6.5e-07 4.5e-05 24.4 0.9 1 23 428 450 428 450 0.98

10 26 0.002 0.14 13.4 5.0 1 23 456 478 456 478 0.98

11 26 0.00016 0.011 16.8 1.9 2 23 496 517 495 517 0.97

12 26 3.4e-06 0.00024 22.1 0.8 1 23 523 545 523 545 0.97

13 26 8.4e-06 0.00058 20.9 0.2 2 23 551 572 551 572 0.97

14 26 2.3e-05 0.0016 19.5 0.5 3 23 580 600 578 600 0.97

15 26 2.5e-05 0.0017 19.4 1.5 1 23 606 629 606 629 0.98

16 26 2.5e-05 0.0017 19.4 3.5 2 23 800 821 799 821 0.97

17 26 9.1e-06 0.00063 20.8 2.4 3 23 829 849 828 849 0.98

18 26 2.1e-06 0.00014 22.8 1.2 1 23 855 877 855 877 0.98

19 26 3.9e-05 0.0027 18.8 3.5 1 23 883 905 883 905 0.98

20 26 0.00014 0.01 17.0 1.7 1 23 911 933 911 933 0.98

21 26 2.6e-06 0.00018 22.5 3.4 1 23 939 961 939 961 0.98

22 26 1.8e-05 0.0012 19.9 1.9 1 23 967 989 967 989 0.95

23 26 2.2e-06 0.00015 22.7 3.5 1 23 995 1017 995 1017 0.97

24 26 0.78 54 5.2 0.0 6 23 1036 1053 1035 1053 0.97

25 26 1.2e-05 0.0008 20.4 1.3 1 23 1059 1081 1059 1081 0.96

26 26 3e-05 0.0021 19.1 3.2 1 23 1087 1109 1087 1109 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	4.7e-06	0.00032	21.7	4.2	1	23	115	137	115	137	0.98
2	26	0.0003	0.021	16.0	6.6	1	23	143	165	143	165	0.97
3	26	1.2e-06	8.1e-05	23.6	0.8	1	23	175	197	175	197	0.98
4	26	0.00012	0.0081	17.3	2.7	1	23	203	225	203	225	0.96
5	26	2.9e-06	0.0002	22.3	1.6	1	23	231	253	231	253	0.98
6	26	2e-05	0.0014	19.7	3.3	1	23	259	281	259	281	0.99
7	26	0.0018	0.13	13.5	0.1	3	23	374	394	373	394	0.98
8	26	0.00023	0.016	16.3	2.2	2	23	401	422	400	422	0.94
9	26	6.5e-07	4.5e-05	24.4	0.9	1	23	428	450	428	450	0.98
10	26	0.002	0.14	13.4	5.0	1	23	456	478	456	478	0.98
11	26	0.00016	0.011	16.8	1.9	2	23	496	517	495	517	0.97
12	26	3.4e-06	0.00024	22.1	0.8	1	23	523	545	523	545	0.97
13	26	8.4e-06	0.00058	20.9	0.2	2	23	551	572	551	572	0.97
14	26	2.3e-05	0.0016	19.5	0.5	3	23	580	600	578	600	0.97
15	26	2.5e-05	0.0017	19.4	1.5	1	23	606	629	606	629	0.98
16	26	2.5e-05	0.0017	19.4	3.5	2	23	800	821	799	821	0.97
17	26	9.1e-06	0.00063	20.8	2.4	3	23	829	849	828	849	0.98
18	26	2.1e-06	0.00014	22.8	1.2	1	23	855	877	855	877	0.98
19	26	3.9e-05	0.0027	18.8	3.5	1	23	883	905	883	905	0.98
20	26	0.00014	0.01	17.0	1.7	1	23	911	933	911	933	0.98
21	26	2.6e-06	0.00018	22.5	3.4	1	23	939	961	939	961	0.98
22	26	1.8e-05	0.0012	19.9	1.9	1	23	967	989	967	989	0.95
23	26	2.2e-06	0.00015	22.7	3.5	1	23	995	1017	995	1017	0.97
24	26	0.78	54	5.2	0.0	6	23	1036	1053	1035	1053	0.97
25	26	1.2e-05	0.0008	20.4	1.3	1	23	1059	1081	1059	1081	0.96
26	26	3e-05	0.0021	19.1	3.2	1	23	1087	1109	1087	1109	0.98

Sequence Information

Coding Sequence: ATGACGAGCGAATGGGTGACTACCGTAACTATAGTCAAACAGGAGCCTTGTGATGTCCCAGAGTGTGATGTGGTGGTGAAAGAGGAGCCTGAAGACTTCTCCGGGATCCCTAGAAAGCTTCGAGAATGCAAGAGCCCGGGGAAAAGCAATAACCCGCCAAGCGAACTTGAACATGAAAACAATTCGATCTCTGGTATAAAAGTAATGATAGAAGCGTTACCCGACGACCGGTGTGATTCAGCTGATGAGGATTGGCCTCCATACCCTGATGTCAAAGTGGAGGTGCTCCTTGACGCGCCTCCCTCTCCCCTGCCGCCTGCAGCAGCCCCCACCGCCCTACCATATGTCTGTGATATATGTAACAAACGATTCAAACAAAACTCCTCATTGTACCACCACAGGAGGTTACACTCTGGAGAACGACCGTTCCAGTGTGAAATATGCTTCAAAACATTTAAAAGAAAAGCTCACCTTCATTCCCATAAGACTATACACGAACCAGCACCAAAAAAAGATGTGATCTTCGTTTGTACCATTTGTGAGAAAAAATTTACAAGGAAAATCAATTTGGATCTTCACATGCGAGTGCATACTAATGAAAGACCGTTCGCTTGTGACTTATGTGAGAAACGGTTCACTAGGAAACAGCATTTACGGGTGCACAGTCTCATGCACACGGGTGAAAAACCCTATCCGTGCACTGTGTGTGCTAAACCTTTTAACACGGCTTCACATCTACATGTACACATGCGAATGCATACAGGGGAGAAGCCTTATACTTGTGACGTGTGCGACAAGCAATTTGCTTACAAGTCACACTTTAACGAGCATAAAAGAATTCACACGGGAAAGTATCCACTTAGCGTCACCATGTCTTGTGACTATTTACAAGTGAAAAATGAGCCTGAAAGGGCCCCACCAGCTATAGGAAGTGAGCAGAAAGAGGCTCCGCACAGTTCTGACGGACTTTCAGCCAGTGAAATTAAGAATGAACTGCGAGAAACAGCGGGAAATGAGTGCAAGCCTTCTGAATCTACGCAAAATGTTGGTATCAAAGAAGAAAGTCAAATGGTACAACGGGGCTCAACCACGGGGCCTGGCTCACATCGCAGACGGGCGTGCCCGGTCTGCGGCAAGACCGCGTGGTCGCCGGCGCACCTGCGCATCCACCAGCGCAGCCACTCGGGCGAGCGGCCGTGCTGCTGCCACGTGTGCGGCGCGCGCTTCGCCACCGCCGGCAACCTGGCGCGCCATCTGCTGGCGCACCAGGGCCACAAGCCCTACCCGTGCGACTACTGCAGCAAGCGATTCACCCAGAAGTCAGTGTTAATAAAACACATAAGAATCCACACAGGGGAGACCCCTTACTCTTGCAACATATGCCAGAAGAAATTCTCCCGGAGCTTCACACTATCCTGCCACCTCAGGATACACGGAGAAAGATACATCAAAGAAGAAAAACCTAAAAATGTACCGGAGAGCTGGACTTGCGAAATATGCAGCAAGATTTTCAAGAACAAATCCTACAGGCATGCTCACATGCAAATACACACTAGAGTGAAAGAGTTCTTTTGCGATGTATGTCAAAAACGATTCGCTACTTTGTCAAACTTGGAGAAGCACGTCAAAGTTCACTCGGAGAAGGAACGGACATGCACTGTTTGTGGGAAGGAATTGAAGACTCAAGCTAATTTGGCGCGGCATATGCTAGTGCATACGGGGGAGAGGCCTTTCGGGTGTAGAGTCTGTGGTAAGAGTTTCACGCAAAAGAGTGTTTTGGTCAAGCACGAGAGGATACATACTGGGGAACTGCCGTATTCATGTGAGGTTTGTTTGAAGAAGTTTTCGAGAAGCTTCACTTTGGAGAATCATTTGAGGCGAGTGCATAAGAAAGGGAAGATTGATGGTAAGGGTCGGAAACCGGTTGTTAAAAGTGTTAGTATAATTGTGGATAATAATTGTAAGAAAAAACAAAGTGTAATGCGTGATGTAGGTAATGATAAGGAAGAATGTATTGCAGATTTTGAAGAAgacaaaaatgtaaattttagtgaaataactTGTGATATAGATGAAAAAGGAATTGAAACGGCGTGCGAAACTAAGCCGTATTGGTGTGGCAATTGTGACTCTTGGCATGCTACTAGCGAAGACTTTTATAAACATGACTGCGTTCAAAATGATTTGGGCtactttgaaaatgaaaatgagagGAATGATTTTAGCGATAATGAAATAGTTGAGACTGTTATTAAAGAGGAAAATCATGATTATGACGGAGTTGTcgataatgaaaatgaaactgaagCTATAGTGAATTCAATTGAAAATAACGAAGTTGAACCAAACGGAGGCGCTGAAGAATCTAAACATGAAAATAGAAAGAAAAAGCGATGGACGTGCAAAAAGTgtaacaaaaaattcaaaactaaACCTTACTACAAAGCTCATTTGAAAACCCACAATGGTGAGACTCCGGGCTTCTGCAATATATGCAAGAAACATTTCAACACCAATGGCAACTTGGTTAGACATATGCTCGTCCACACCGGCGTCAAACCATTCGTATGCGAATATTGCAACAAACGTTTCACACAAAAAAGTGTTCTAATCAAACACGAGAGAATTCACACGGGCGAACAGCCGTATTCGTGTGAGATTTGCCACAAGAAATTCGCAAGAAGCTTCACGCTTTTGAACCACAAAAGAGTGCATAGCACCATTAAGCCGTTCTCTTGTAAGTTTTGCGAGAAATCCTTCACCCAACGCAGCGCCATGTTGATTCACGAAAGGAATCATACTGGGGAACGACCGTTCTATTGTAACGTGTGTAACAAAAGATTTACTAGTAACAGTACTTTGAAGAGTCATAAGCGGGTGCATACTGGGAATAAGCCGTTTCTGTGCGACGTGTGCTACAAGCAGTTTTCTACGAGTAGCAATTTTTATAGTCATATGAGGATACATACTGGAGATAAGAGGCACTCCTGCGATGTTTGTGGGAAGAGATTTTATACGAACAGCAGTTTGAATAAGCACAAACGCGTCCACACTCACAAGCCTAGCCCGGCGCCCCCCGACGCGGCCAAGCCGCTGGGCTGCGCGTGCGGCCGCCGcttcggcgcgcgcgccgccctgcTGCGCcatgcgcgcgcgcacgccgcgccgcgcccgcacgCCTGCCCCACATGCGACAAACGCTTCGCGCTCAGCGGCGACCTGACGCGCCACCGGCGCTCGCACAGCGGCGAGAAGCGCTACTCCTGCGAGACTTGCCACAAACAGTTCACGCGCAACGCCTCGCTCGCGCAGCACCGCCGGCTGCACGACCCTCAGCGCGCGACTGACACAAAACAACAATcaaataatgaataa
Protein Sequence: MTSEWVTTVTIVKQEPCDVPECDVVVKEEPEDFSGIPRKLRECKSPGKSNNPPSELEHENNSISGIKVMIEALPDDRCDSADEDWPPYPDVKVEVLLDAPPSPLPPAAAPTALPYVCDICNKRFKQNSSLYHHRRLHSGERPFQCEICFKTFKRKAHLHSHKTIHEPAPKKDVIFVCTICEKKFTRKINLDLHMRVHTNERPFACDLCEKRFTRKQHLRVHSLMHTGEKPYPCTVCAKPFNTASHLHVHMRMHTGEKPYTCDVCDKQFAYKSHFNEHKRIHTGKYPLSVTMSCDYLQVKNEPERAPPAIGSEQKEAPHSSDGLSASEIKNELRETAGNECKPSESTQNVGIKEESQMVQRGSTTGPGSHRRRACPVCGKTAWSPAHLRIHQRSHSGERPCCCHVCGARFATAGNLARHLLAHQGHKPYPCDYCSKRFTQKSVLIKHIRIHTGETPYSCNICQKKFSRSFTLSCHLRIHGERYIKEEKPKNVPESWTCEICSKIFKNKSYRHAHMQIHTRVKEFFCDVCQKRFATLSNLEKHVKVHSEKERTCTVCGKELKTQANLARHMLVHTGERPFGCRVCGKSFTQKSVLVKHERIHTGELPYSCEVCLKKFSRSFTLENHLRRVHKKGKIDGKGRKPVVKSVSIIVDNNCKKKQSVMRDVGNDKEECIADFEEDKNVNFSEITCDIDEKGIETACETKPYWCGNCDSWHATSEDFYKHDCVQNDLGYFENENERNDFSDNEIVETVIKEENHDYDGVVDNENETEAIVNSIENNEVEPNGGAEESKHENRKKKRWTCKKCNKKFKTKPYYKAHLKTHNGETPGFCNICKKHFNTNGNLVRHMLVHTGVKPFVCEYCNKRFTQKSVLIKHERIHTGEQPYSCEICHKKFARSFTLLNHKRVHSTIKPFSCKFCEKSFTQRSAMLIHERNHTGERPFYCNVCNKRFTSNSTLKSHKRVHTGNKPFLCDVCYKQFSTSSNFYSHMRIHTGDKRHSCDVCGKRFYTNSSLNKHKRVHTHKPSPAPPDAAKPLGCACGRRFGARAALLRHARAHAAPRPHACPTCDKRFALSGDLTRHRRSHSGEKRYSCETCHKQFTRNASLAQHRRLHDPQRATDTKQQSNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -