Cdum004491.1
Basic Information
- Insect
- Clepsis dumicolana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963691665.1
- Location
- OY829506.1:26015705-26056338[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-14 3.8e-11 43.2 0.0 1 38 366 404 366 407 0.95 2 2 7.6e-19 1.7e-15 57.1 0.0 1 43 571 614 571 616 0.95
Sequence Information
- Coding Sequence
- ATGAAAGGTTGCCGATCCCGGATGCAGCAGTCACCTGTTCAATCATTCTTTTATGGTCTAGAACGGGTGGCCGAGGAGTTGATGGGTCGCCGAAAATGGAAACTCTACCAAGACGCGATCCTACCGAAACGAGACGGCGAACCCTCCAGCGACGACTCCATGCCGTCCACCGATCCCCCGCCAGCGCTCAAGATCAAGACCATAGAGCAGATCAACGAGAACAAGCAGGAAGAGAAGAGACCCGAGACGATTCTGGAGAGTCTGATCAAGAGGCCGGCGACGGTGCCGAAGGTCGAGATGGTGGAGGAGCCGACGGACTGGAAGCCCTCAGACAAGTGCTACTTCTGTGTCGAGGGTGAGGGCGGCGGGGAGTCCAGGCCCACGGCTGCTCAGAGCCCCGCGTCAGAATCCGACAGCAGCTCGGTGTCAGGAGCCAAGAGTCCTGCCGCGGCGCCGCCGCTGCTGCAGCATTTACTGCAGCTGCAACTGCAGGCGCAGTCGCCACAAGCTATTGCACAGGTAATGTTGGACGCGGGACAGATGGCAGAGTCCAATAGCGGGTCGGTTACAGGAACCAAGTGTCCTGCCGCGGCGCCGCCGCTGCTGCTGCATTTACTGCAGCTGCAACTGCAGGCGCAGTCGCCACAAGCTGCACAGGTAATGTCGGACGCGGGACAGACAGCAGAGTCCAATAGCGGGTCAGTTACAGGCGCCAAGAGTCCTGCCGCGGCGCCGCCGCTGCTCCAGCATTTACTGCAGCTGCAACTGCAGGCGCAGTCGCCAAAAGCTATTGAACAGCTTCAGCAGATGATCGCAACGCTAGCAGCCCTGGGCACGGGGCTGGTCCCTCCAGCACTCTCCCAAGCCTGGCTGATGCAGCGGCTGACGCACGGCGCGCGGCTACCTGATAGGCTTCAGGATGAGAAGGTGTCAGCTCCTAATGCGTCGCCAACATCCGCGGAACAGCCCCTCGATCTCAGCGCCAAGTCTACGTCGAGCACCAGCGGGACCCCGCCACCTGACAGCAAGGATAACAGATTGAAGCGCCCTCTGGCAGAGAACTCAGCTGGCAACAGCGGCGCGCGGCGCACCTACACAGAGGACGAACTCCAGTCGGCCCTCCGAGACATCCAGACGGGCCGGCTCGGCACTCGGCGCGCCGCCGTCGTCTACGGCATCCCCCGCTCCACCCTCCGCAACAAAGTCAACAAGTTCGGCCTCGTCGCCGACCCGCCCGACTCCGACCCTGACTCCGACCCCGAACGACCCGACTCCCCGCCCTCTGTCATCCTGAAAATACCGACCTTCCCACCCCCTGACGATAAATCGCCGTCGCCAGCTACTCCAGTCGCCCCGGTCACGCCTATCTTACCGTCTCAGCCGCCACTCACGCAACCCTCACAGTTACTTCTATCAACGTCGGTGTTCGCTGATCCGCCTTCCACGCAACATCTCTTCACATCGCTCAGCGACGTCATAGCCAAGAGCATAAGCCAGAAGTTCCAACAACCGCTCGACCGGCCTCACCAAGCGGCCGACTTAGCGTTCATGCGACACCAGCAGGACAGACACGTCTCCGTCATCAAAACACCACCAGATAATTCTAGAAACTTCTCAGCTCCGAGCAATTCCCGGGCTCCGACGAACAACAATGGCCAGCCAGCAACCGGAAAGGGCACTAGACCGAAGAGGGGGAAGTATAGGAACTATGACAGGGATAGTTTAGTTGAGGCGGTCAAAGCGGTGCAGCGGGGTGAGATGTCGGTCCACCGCGCTGGTTCCTACTACGGCGTACCGCATTCTACGTTGGAATATAAAGTGAAGGAACGGCATTTGATGCGGCCTCGTAAACGCGAGCCGAAGCCTCCTCAAGACGTGAAGCCGCAGCCGCCGAAACCGCCACCACCGAAGCCAATGGGGAAACCTTTCAGTAATGGAATGAACGGTCCCGAAACTCCAGGGTATCCTCCGAGCTACTTCTGGCCGGGGGGTGGTTTCCCGGCGCCTCCTGCTCCGGACCTGTACGCGTCGCACATGATGCGTCGTTTGCGTGAAGAAGCGCCGCCGCCAGCGAACGGGTCGTTTCTTGAAGGAATTATAAGGTCGAGTCTAGAGCGTCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGAGCcccgcgcggcggcgggcgaggCGCTGCTGCGGCGGCTGGCGACGGACGAGGAGCcgccggcgcggcgggcgcgcgtgGACTCCTCGGACCGCGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCccacgccgccgcccgcgccgcccgccgccccgcCCGACCGCGCCTAG
- Protein Sequence
- MKGCRSRMQQSPVQSFFYGLERVAEELMGRRKWKLYQDAILPKRDGEPSSDDSMPSTDPPPALKIKTIEQINENKQEEKRPETILESLIKRPATVPKVEMVEEPTDWKPSDKCYFCVEGEGGGESRPTAAQSPASESDSSSVSGAKSPAAAPPLLQHLLQLQLQAQSPQAIAQVMLDAGQMAESNSGSVTGTKCPAAAPPLLLHLLQLQLQAQSPQAAQVMSDAGQTAESNSGSVTGAKSPAAAPPLLQHLLQLQLQAQSPKAIEQLQQMIATLAALGTGLVPPALSQAWLMQRLTHGARLPDRLQDEKVSAPNASPTSAEQPLDLSAKSTSSTSGTPPPDSKDNRLKRPLAENSAGNSGARRTYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLVADPPDSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATPVAPVTPILPSQPPLTQPSQLLLSTSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHQAADLAFMRHQQDRHVSVIKTPPDNSRNFSAPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPMGKPFSNGMNGPETPGYPPSYFWPGGGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTEPRAAAGEALLRRLATDEEPPARRARVDSSDRALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462314; iTF_00021261; iTF_00156176; iTF_00325305;
- 90% Identity
- -
- 80% Identity
- -