Cbil016418.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- nfxl1
- Assembly
- GCA_036417725.1
- Location
- CM071156.1:3812459-3814921[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 22 0.014 1.9e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 22 3.1e-07 0.0041 17.7 15.9 3 19 186 202 185 202 0.95 4 22 1.5e-06 0.02 15.4 17.8 3 19 239 255 227 255 0.91 5 22 2 2.6e+04 -4.1 1.4 6 10 280 284 280 284 0.96 6 22 1.1e-09 1.5e-05 25.5 11.5 1 19 290 308 290 308 0.99 7 22 1.6e-06 0.021 15.4 19.3 3 19 345 361 337 361 0.86 8 22 1.9 2.5e+04 -4.0 0.7 1 4 370 373 370 373 0.94 9 22 2 2.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 22 1.1e-06 0.015 15.8 16.0 1 18 395 412 395 413 0.97 11 22 8e-09 0.00011 22.7 16.9 1 19 422 440 422 440 0.99 12 22 0.0002 2.7 8.6 6.4 9 19 488 498 486 498 0.89 13 22 0.091 1.2e+03 0.2 6.4 3 12 509 518 508 518 0.89 14 22 0.31 4.1e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 22 0.12 1.6e+03 -0.2 0.4 7 12 567 572 567 579 0.86 16 22 5.1e-06 0.067 13.8 4.3 1 11 588 598 588 599 0.97 17 22 0.45 5.9e+03 -2.0 1.4 14 18 609 613 609 614 0.85 18 22 3.2e-05 0.42 11.2 12.8 4 18 627 642 625 643 0.87 19 22 2 2.6e+04 -6.5 3.4 9 13 649 653 649 653 0.71 20 22 2 2.6e+04 -5.0 2.1 6 10 674 678 673 678 0.81 21 22 2.9e-06 0.038 14.6 14.2 1 18 684 702 684 703 0.91 22 22 0.95 1.3e+04 -3.1 1.4 5 10 732 737 732 737 0.93
Sequence Information
- Coding Sequence
- ATGGCCAGACGATATAGAGATGCAGCGGCGAAACTGCAGCAGAACGTTCAAAAACATTTGCAGGAAATGAAAGAACTCTCGTCGTCGGAAGATGAAGAACCATTCGAATCCAGCGTGTTGGAAGGTGTCTTCCAGAGCTACTGGTCGGGTGGTGGTGACACCCACATGCTGAACAGGACCAAGAACGTTCTAGAGGAAGCCATCAGCGGCCGCTCAATAACCTGCCTCATATGCATAGGTTCCATCAAACGAGCAGACGCGATATGGAGCTGCGGCCACTGTTACTGCTATTTCCACCTGTCTTGCATCCAAAAATGGTCGAACGACAGCATCAGTTTACGCACCGAGGCAAACCAGGGGCCAGTGACAGTGTTTGTGCCTAAAAAAGTGGAGTGGTGTTGCCCAAAATGCCGGCACTCGTATTCGAAAGACGAAATCCCGCGTAAGTACCGATGTTTTTGCGAGAAAACTGacgacccaccgtaccacccaTGGTTGGTTCCACACACATGTGGCGAAGTGTGCAGTAAGAGGTTATCAACTGGAGATAATTGTAAACATAAATGCTTGCTGCTTTGTCATCCAGGGCCATGTCCCCCATGCCCTCAAACTGTTAATGGTACCTGCTTCTGTGAGAAGGAACGTAAAAGAGTGAGATGTAGTGCTGCAAAATGGTCTTGTGGTCAACGGTGCAAGAAAACGTTACTCTGTCACACTCACAAGTGTGAGAATGAGTGTCATGAAGGAAACTGTCCACCATGCAGCTACACCAGTGTACAACCCTGTCAATGTGGCAGTGAGAAAGCAAAACGTCCCTGTAATGACCCAGTGTGGCTCTGTAAAAAAGTTTGTAATAAACTGTATTCATGTGGATACCACAAATGTGAAAGAATCTGTCATGCCGGAGCTTGTGGTGAGTGCCCCAACTCGGGCATGAAATCTTGCCCCTGTGGAGCAAATCAGAAATACGTCCAGTGCCCTGATGTGATGGAAACATGTTTAGGAACATgtggaaagttacatgaagactGTGAACACAACTGTCCTGAGAAATGCCATAAAGGACCCTGTCCACCCTGCCAAGTGCTAGTCCAGAAGAAATGTCAATGCGGCACACATGTTCGATCTCTACCATGCAGTAAAGAGTTTAAATGTGAAACTAAATGTAGAGGCACCCGGCCATGTGGGAAACATAGCTGTGCTCGCAAATGCTGTAATGGAAACTGTCCGACATGTGAGAAGATATGTGATAAACCACTCCAGTGTGGTAGGCATAAATGTACCAATATCTGCCATCATGGCCCATGCTATCCTTGCCCTTTAGAATCCAAAGTCACTTGTAGATGCAAAGAAACGTACATCAGAGTACCGTGTGGGAGAGAAAAGTTTGTAAGGCCCCCAAAATGTTCACTACCATGCAAGATTAAATACAAATGTGGACATGCTGAGGAAAATAAACATTCTTGCCATTTTGGTGACTGCCCACCATGTAAAGCGGTATGCTTTAAAATATATCCAAAATGCGAACATGTATGCAAAGCCATATGCCATGAATATGTGGCAGTTGTGTTCAAACAGATAGAAAAGCCAGCTACACCCTGGGAAGTTCAGCCCCCGAAGACCAAAATTATGAGTTTAGACTGCCCCCCCTGTGAGACACGTGTCCCTGTTATATGTCTGGGGGAACATGAGACTGAAGAGCAACCTTGCCATTCAGCGACTCGTCGACCTTGTGGAAGAGAATGTGGCCGTCCATTGCCTTGTGGCAACCATAAGTGCGCTTTATTGTGCCACCTTTTGAAAACCAACGAAAATGTGCCTTCAAATTGCAAGCCCTGTGAGAAAGAATGTCTGGTGCCTCGACCAGAAAGATGTGTGCATAAATGCTTGATAAGGGCATGTCACCCTGGACCGTGTCCACCTTGTGATGTGCTAGAAAGGATACCATGTCACTGTGGAGTCACAGAAATGTATGTACGTTGCCGAGAGCTGTCAACAGCCTCTGAGGAAAAGCTATCTTGCCAACAACAGTGCTCGAAAAACTTAGAATGTGGGCATAGATGTCGGAACACATGCCATTCTGGCCCATGTGGAAACCAAACCTGCACAAGGAAAACGAAGATACACTGTCCATGTTCCAACTTGAAGAAAGAAGCTCCATGTAATTCAGTTAGAAACGGAGAGGCCAGAGTTACTTGTGACAAGACATGTGAAGAGAAGAAAATCGCAGCACAAATTGAGAAACAGAGAGAAGAGCGCAGACAGAAAGAGATGGAGGAAGAAAGGAACAGGAGAGAGCTTGAGGAATATGAGTGGAAATTAAGTGGCAAAAAGAAGaagtataaagaaaaaaaggttGTTGTTAACAAAGATGATAGAATGTGGGTGCAGCGTTATTGGATTCCTATTTTATCAATATTGGTAGTGTTTATAGCAGctatatattacatattttatatataa
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKELSSSEDEEPFESSVLEGVFQSYWSGGGDTHMLNRTKNVLEEAISGRSITCLICIGSIKRADAIWSCGHCYCYFHLSCIQKWSNDSISLRTEANQGPVTVFVPKKVEWCCPKCRHSYSKDEIPRKYRCFCEKTDDPPYHPWLVPHTCGEVCSKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGTCFCEKERKRVRCSAAKWSCGQRCKKTLLCHTHKCENECHEGNCPPCSYTSVQPCQCGSEKAKRPCNDPVWLCKKVCNKLYSCGYHKCERICHAGACGECPNSGMKSCPCGANQKYVQCPDVMETCLGTCGKLHEDCEHNCPEKCHKGPCPPCQVLVQKKCQCGTHVRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGNCPTCEKICDKPLQCGRHKCTNICHHGPCYPCPLESKVTCRCKETYIRVPCGREKFVRPPKCSLPCKIKYKCGHAEENKHSCHFGDCPPCKAVCFKIYPKCEHVCKAICHEYVAVVFKQIEKPATPWEVQPPKTKIMSLDCPPCETRVPVICLGEHETEEQPCHSATRRPCGRECGRPLPCGNHKCALLCHLLKTNENVPSNCKPCEKECLVPRPERCVHKCLIRACHPGPCPPCDVLERIPCHCGVTEMYVRCRELSTASEEKLSCQQQCSKNLECGHRCRNTCHSGPCGNQTCTRKTKIHCPCSNLKKEAPCNSVRNGEARVTCDKTCEEKKIAAQIEKQREERRQKEMEEERNRRELEEYEWKLSGKKKKYKEKKVVVNKDDRMWVQRYWIPILSILVVFIAAIYYIFYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820620;
- 90% Identity
- -
- 80% Identity
- -